2013 Archives by thread
Starting: Mon Jan 7 20:45:49 CST 2013
Ending: Tue Dec 31 16:37:30 CST 2013
Messages: 835
- [MOAB-dev] mb_TAG_COUNT
Roman Putanowicz
- [MOAB-dev] scaling on intrepid
Rob Latham
- [MOAB-dev] r5931 - in MOAB/trunk: test/parallel tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] r5932 - MOAB/trunk/tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] r5933 - MOAB/trunk/test/parallel
iulian at mcs.anl.gov
- [MOAB-dev] r5937 - in MOAB/trunk: test/parallel tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] Exchanging tags with no name
Milad Fatenejad
- [MOAB-dev] r5938 - MOAB/trunk/tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] Importing BC in moab directly from cubit mesh file
MICHAEL CORTIS
- [MOAB-dev] r5944 - in MOAB/trunk: . src/moab
tautges at mcs.anl.gov
- [MOAB-dev] r5945 - MOAB/trunk/tools/mbcoupler
vijaysm at mcs.anl.gov
- [MOAB-dev] r5946 - in MOAB/trunk: src/lotte src/moab/point_locater/lotte tools/mbcoupler
vijaysm at mcs.anl.gov
- [MOAB-dev] r5947 - MOAB/trunk/src/moab
tautges at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cslam: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-shared: failed compile
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-par: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-par-sta: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-ser: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-par-sha: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-par: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] r5948 - MOAB/trunk/src/lotte
vijaysm at mcs.anl.gov
- [MOAB-dev] r5949 - MOAB/trunk/src
tautges at mcs.anl.gov
- [MOAB-dev] r5950 - in MOAB/trunk/src: io moab parallel
vijaysm at mcs.anl.gov
- [MOAB-dev] r5951 - MOAB/trunk/config
vijaysm at mcs.anl.gov
- [MOAB-dev] r5953 - MOAB/trunk/src/moab
vijaysm at mcs.anl.gov
- [MOAB-dev] r5954 - in MOAB/trunk: src src/moab test/parallel tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] r5956 - MOAB/trunk/tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] r5957 - in MOAB/trunk: . itaps/imesh src src/io src/moab test test/perf tools/dagmc tools/refiner
tautges at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-par: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-par-sha: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] r5959 - MOAB/trunk/src/parallel
milad at mcs.anl.gov
- [MOAB-dev] r5960 - MOAB/trunk/tools
iulian at mcs.anl.gov
- [MOAB-dev] r5961 - in MOAB/tags: . 4.6.0RC1
jain at mcs.anl.gov
- [MOAB-dev] r5962 - MOAB/tags
jain at mcs.anl.gov
- [MOAB-dev] r5963 - MOAB/trunk
jain at mcs.anl.gov
- [MOAB-dev] r5964 - in MOAB/tags: . 4.6.0RC1
jain at mcs.anl.gov
- [MOAB-dev] MOAB 4.6.0RC1 released
Rajeev Jain
- [MOAB-dev] r5965 - MOAB/trunk
jain at mcs.anl.gov
- [MOAB-dev] r5968 - in MOAB/trunk: src/parallel src/parallel/moab test/parallel tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] r5969 - in MOAB/trunk: test/parallel tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] r5970 - MOAB/trunk/src/parallel
iulian at mcs.anl.gov
- [MOAB-dev] Problems configuring MOAB with VTK
Roman Putanowicz
- [MOAB-dev] MOAB and VTK configuration problems
Roman Putanowicz
- [MOAB-dev] r5977 - in MOAB/trunk/src: . parallel
iulian at mcs.anl.gov
- [MOAB-dev] r5980 - MOAB/trunk/src
iulian at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-par-tru: failed configure
moab-dev at mcs.anl.gov
- [MOAB-dev] r5982 - in MOAB/trunk: src src/io src/moab test
tautges at mcs.anl.gov
- [MOAB-dev] r5985 - MOAB/trunk
jain at mcs.anl.gov
- [MOAB-dev] r5986 - in MOAB/tags: . 4.6.0RC2
jain at mcs.anl.gov
- [MOAB-dev] Released MOAB4.6.0RC2
Rajeev Jain
- [MOAB-dev] r5987 - MOAB/trunk
jain at mcs.anl.gov
- [MOAB-dev] r5991 - MOAB/trunk
jain at mcs.anl.gov
- [MOAB-dev] r5992 - in MOAB/branches: . Version4.6
jain at mcs.anl.gov
- [MOAB-dev] r5993 - in MOAB/tags: . 4.6.0
jain at mcs.anl.gov
- [MOAB-dev] MOAB 4.6.0 Released !
Rajeev Jain
- [MOAB-dev] r5995 - MOAB/trunk
jain at mcs.anl.gov
- [MOAB-dev] r5999 - in MOAB/trunk: src/parallel test/parallel tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-par-sta2: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub13-ser: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-serstatrunk: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-sersta-trunk: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-sertru: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-par-tru: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] r6002 - MOAB/trunk/src/io
iulian at mcs.anl.gov
- [MOAB-dev] r6003 - MOAB/trunk/src/io
iulian at mcs.anl.gov
- [MOAB-dev] r6007 - in MOAB/trunk: . src/io
tautges at mcs.anl.gov
- [MOAB-dev] r6008 - in MOAB/branches/Version4.6: . src/io
tautges at mcs.anl.gov
- [MOAB-dev] r6014 - MOAB/trunk/src/io
iulian at mcs.anl.gov
- [MOAB-dev] ANL repos will be moving to git on bitbucket.org
Tim Tautges
- [MOAB-dev] r6015 - MOAB/trunk/tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] Would like to go over to BitBucket soon (next week)...
Tim Tautges
- [MOAB-dev] r6022 - MOAB/trunk/tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] Tonight for switchover to git / bitbucket?
Tim Tautges
- [MOAB-dev] r6024 - MOAB/trunk/tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] r6025 - MOAB/trunk/tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] r6027 - MOAB/trunk/tools/mbcslam
iulian at mcs.anl.gov
- [MOAB-dev] Just turned off write access to MOAB repo
Tim Tautges
- [MOAB-dev] commit/MOAB: 214 new changesets
Bitbucket
- [MOAB-dev] commit/MOAB: 21 new changesets
Bitbucket
- [MOAB-dev] buildbot failure in moab-cub-ser-trunk: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] Moved MOAB repo now
Tim Tautges
- [MOAB-dev] commit/MOAB: 2 new changesets
Bitbucket
- [MOAB-dev] commit/MOAB: tautges: Changing all writers to have consistent default arguments to virtual write_file function.
Bitbucket
- [MOAB-dev] Build failed in Jenkins: moab_par #20
jenkins-ci at mcs.anl.gov
- [MOAB-dev] commit/MOAB: 10 new changesets
Bitbucket
- [MOAB-dev] commit/MOAB: tautges: Improved comments to ScdInterface.hpp.
Bitbucket
- [MOAB-dev] commit/MOAB: tautges: Moving old examples into old/ subdir to prepare for new examples.
Bitbucket
- [MOAB-dev] commit/MOAB: tautges: Moving directories into old/ too.
Bitbucket
- [MOAB-dev] commit/MOAB: ShengyongCai: add HelloMOAB
Bitbucket
- [MOAB-dev] commit/MOAB: 4 new changesets
Bitbucket
- [MOAB-dev] commit/MOAB: tautges: Cleaning up a bit.
Bitbucket
- [MOAB-dev] commit/MOAB: ShengyongCai: add option if users input a file.
Bitbucket
- [MOAB-dev] commit/MOAB: ShengyongCai: Better Doxygen-ized comment section.
Bitbucket
- [MOAB-dev] commit/MOAB: ShengyongCai: update the variable MESH_DIR
Bitbucket
- [MOAB-dev] commit/MOAB: ShengyongCai: add more entities in HelloMOAB test
Bitbucket
- [MOAB-dev] commit/MOAB: ShengyongCai: add HelloMOAB into makefile
Bitbucket
- [MOAB-dev] commit/MOAB: rajeeja: o Adding example to read material, neumann and dirichlet sets from an exodus file
Bitbucket
- [MOAB-dev] commit/MOAB: ShengyongCai: update comment section for doxygen
Bitbucket
- [MOAB-dev] commit/MOAB: 12 new changesets
Bitbucket
- [MOAB-dev] commit/MOAB: 7 new changesets
Bitbucket
- [MOAB-dev] commit/MOAB: iulian07: doxygenize better
Bitbucket
- [MOAB-dev] commit/MOAB: iulian07: forgot to add the file for HelloMoabPar example
Bitbucket
- [MOAB-dev] commit/MOAB: iulian07: Adding more test and output files to ignore.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: 3 new changesets
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: rajeeja: o Update Doxygen Comments and add make rule for TestExodusII example
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: backport svn commit 6003 to branch Version4.6
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: rajeeja: doxygen fixes for example
commits-noreply at bitbucket.org
- [MOAB-dev] [Meshkit-dev] Current state of MeshKit
Iulian Grindeanu
- [MOAB-dev] commit/MOAB: tautges: Adding another direct access example.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: jayeshkrishna: Extracting the logic for adding dummy tag creation info, related to dimensions with no corresponding coordinate variables, to a separate function and calling it for all supported mesh types
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Removing executable, adding .F90.
commits-noreply at bitbucket.org
- [MOAB-dev] buildbot failure in moab-intel: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] commit/MOAB: 11 new changesets
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: 5 new changesets
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: try (again) to fix ticket 274
commits-noreply at bitbucket.org
- [MOAB-dev] buildbot failure in moab-intel: failed test install
moab-dev at mcs.anl.gov
- [MOAB-dev] commit/MOAB: iulian07: if build without netcdf, do not compile process_arm
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: replace free() calls from fortran with iMesh_freeMemory() calls
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: rajeeja: Important changes needed in Version4.6
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: rajeeja: compiler.m4 stuff for bgq
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix few typos:
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Revised sample code in Section 2.3 and Section 2.4
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: For the second argument of load_file call in Section 2.3, we should use &file_set instead of file_set
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Backing out changes from 732016a that changed how fortran apps were linked.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Fixed reading bc data in cub files, from Lukasz Kaczmarczyk. Passes make check.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: make the file unix again, and put de debug flag to false, by default
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: logic for endianness for cubit file reader
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: correct the endianness (again)
commits-noreply at bitbucket.org
- [MOAB-dev] problem with --disable-fortran
Lorenzo Alessio Botti
- [MOAB-dev] commit/MOAB: rajeeja: Changes for --disable-fortran option. Thanks Lorenzo.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: rajeeja: Adding to master branch, Changes for --disable-fortran option. Thanks Lorenzo.
commits-noreply at bitbucket.org
- [MOAB-dev] Requires fortran compiler?
Barry Smith
- [MOAB-dev] crash with clang compiler
Barry Smith
- [MOAB-dev] MOAB for Windows (Visual Studio)
A P
- [MOAB-dev] commit/MOAB: danwu: Update test/io/read_nc.cpp to add test cases for reading MeshFiles/unittest/io/fv26x46x72.t.3.nc
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Replace tab with spaces for indentation in NCHelperHOMME.cpp, line 37
commits-noreply at bitbucket.org
- [MOAB-dev] buildbot failure in moab-distcheck: failed compile
moab-dev at mcs.anl.gov
- [MOAB-dev] commit/MOAB: iulian07: add the fv26x46x72.t.3.nc test file to the distribution list
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: jhu: Minor changes to the document just added for user's guide.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: jhu: Minor change to document reference number.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Fixing CMake-based build.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: jhu: The moabUG.h goes to doc/UG per Tim's request, and user.dox.in got changed accordingly.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix a few "array subscript is above array bounds" warnings coming from some of the NC helper classes (they had been in the ReadNC class for a long time before the helper classes were introduced).
commits-noreply at bitbucket.org
- [MOAB-dev] Use of issues on BitBucket
Andrew Davis
- [MOAB-dev] commit/MOAB: jhu: Added a developer's guide to doc/DG, covers content of seq.tex. Will insert the three figures when they are checked in.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: jhu: Adding the rest two files for developer's guide changes.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: fix skinner for polygons, for non-vertex-adjacency case
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Added developer's guide for metadata_info.doc.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: 16 new changesets
commits-noreply at bitbucket.org
- [MOAB-dev] buildbot failure in moab-serial: failed compile test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-par: failed compile test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-32bit-handles: failed compile test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-ser: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-ser-sta: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-shared: failed compile test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-ser-trunk: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-sertru: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-ser: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-sersta-trunk: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-serstatrunk: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] sorry for the noise
Iulian Grindeanu
- [MOAB-dev] commit/MOAB: danwu: [Bug fix] The code that sets pLocalGid is correct in NCHelperMPAS::read_ucd_variable_to_nonset_async(), but wrong in NCHelperMPAS::read_ucd_variable_to_nonset()
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Modify the check of cells.psize(). If MOAB is not compiled parallel, there will be no gaps between the face sequences for different cell groups
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: make distcheck needs extra dist defined for all files used in tests
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: we need to specify output files that need to be
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: vijaysm: Remove sub_directory src/io for Cmake configuration.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: create the quad mesh for mbcslam, span between departure and arrival edges
commits-noreply at bitbucket.org
- [MOAB-dev] Problems with MB Coupler
Sevag Doniguian
- [MOAB-dev] commit/MOAB: vijaysm: Various fixes to the CMake build system.
commits-noreply at bitbucket.org
- [MOAB-dev] Tag values problem,
Lukasz Kaczmarczyk
- [MOAB-dev] errors in mbcoupler test
Sevag Doniguian
- [MOAB-dev] commit/MOAB: janehu: Separate Metadata info from developer's guide.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Minor update for the metadata info.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: 6 new changesets
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Added the figures for developer's guide.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Revision d018f20 has caused some ParGAL tests for Eulerian Spectral grid to fail. To detect such kind of regressions, MOAB unit test read_nc.cpp is updated to check some values of tag T0 read from camEul26x48x96.t3.nc. This new test will pass on revisions before d018f20, fail on revision d018f20, and pass on revisions after f6aef30.
commits-noreply at bitbucket.org
- [MOAB-dev] Remove duplicates
Andrew Davis
- [MOAB-dev] commit/MOAB: danwu: The file set is meant to contain the entities that came with the original file; the gather set is something for convenience to the root processor, and duplicates entities on other processors. Therefore, the gather set entities should not be part of the file set.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: 17 new changesets
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Minor formatting changes for MetaData.h, also added a couple paragraph from
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Minor change for styleguide for moab.
commits-noreply at bitbucket.org
- [MOAB-dev] Bug in kdtree?
Andrew Davis
- [MOAB-dev] commit/MOAB: iulian07: fix correctly the bug in KDTree
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Changed doxygen output directory to be just html instead of user/html;
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: - make HelloMOAB generic to face/element type
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: makefile: GetEntities: show how to get adjacencies and connectivity
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Changing mesh file default name.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: - Adding HelloParMOAB.cpp test, removing HelloMoabPar (for name consistency)
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Changing output formatting a bit.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Removing old file.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Adding example implementation of Lloyd relaxation, in parallel.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Forgot to add this mesh file, randomized tris meshing a hole in plate.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Adding MPI_Reduce on max delta and reporting interval.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Improving comments and a bit of code.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Added a README file into doc/ with instructions about how to generate docs.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: For Read/Write interfaces, function names were changed long ago to better indicate what they did:
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Rename VarData::readDims to readStarts to better indicate its meaning
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: 13 new changesets
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Changed location for figures in developer's guide according to moab documents' location change.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: use \image for included figures
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Minor update on the doxygen comments (to generate h5mmain.html) inside mhdf.h, line 73. It should be: The four sub-groups ...
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix build error for NCHelperHOMME.cpp when PNETCDF_FILE is defined.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix Makefile.am that caused build error
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Added more stuff on moab main page for easy view.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Removed igeom subpage from "ITAPS Interfaces" page since there's no coresponding page for this topic.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Changed the lay-out for the moab main page per Tim's request: showing UG, DG and MetaData as well as Full list of documents' links on the main page.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Moved some variables and functions from ReadNC class to its helper classes, reducing ReadNC.cpp to less than 450 lines. This change passed make check.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Refined NCHelperFV and NCHelperEuler, especially some legacy code from ReadNC.cpp that are inconsistent or redundant.
commits-noreply at bitbucket.org
- [MOAB-dev] Ack, I broke the tests...
Tim Tautges
- [MOAB-dev] buildbot failure in moab-inc: failed git
Iulian Grindeanu
- [MOAB-dev] commit/MOAB: tautges: Fixing various tests that I broke before.
commits-noreply at bitbucket.org
- [MOAB-dev] buildbot failure in moab-pgi: failed compile test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-bare: failed compile test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-par-sta: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cslam: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-par-sta2: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-par: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-par-tru: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] commit/MOAB: danwu: Eliminated compiler warnings (mostly [-Wunused-parameter]) in NCHelper classes.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Eliminated compiler warnings ([-Wunused-variable]) in NCHelper classes for serial build.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: number of processors for scdseq tests should be at most 16
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: test buildbot, ignore
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: periodicity vars have dimension 3 now
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Added sqijk to ScdParData::PartitionMethodNames array and updated comment of enum ScdParData::PartitionMethod
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Updated size of ScdParData::PartitionMethodNames array
commits-noreply at bitbucket.org
- [MOAB-dev] Boundary nodes and faces
Tim Tautges
- [MOAB-dev] commit/MOAB: danwu: Hack Intel compiler 12 issues (when -O2 optimization is enabled)
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Renamed PARTITION_METHOD=TRIVIAL_PARTITION to PARTITION_METHOD=TRIVIAL in all ucd unit tests. Also removed code inside NCHelperHOMME and NCHelperMPAS constructors that tests NODAL_PARTITION option.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: Changes in Skinner API
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: replace an assert in cubit file reader
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Some minor changes to NCFUNC macros used in ReadNC code.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Updated some NCFUNC macros in ReadNC.hpp.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Create gather set for MPAS if specified in the read option. For PNetCDF, use independent I/O mode to read a variable, if this read is only for the gather processor.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Correction for HOMME (zVertVals should be levVals when deciding whether down is positive) and some minor changes.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Two minor changes. For __<var_name>_DIMS conventional tag, data type should be H=entity handle instead of C=character. For partition method, TRIVIAL_PARTITION is renamed to TRIVIAL to be consistent with latest code.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Updated parallel unit test mpastrvpart for testing gather set.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: PARTITION=<partitionTagName> is no longer a read option, should always use the partition set tag returned by ParallelComm::partition_tag(), with the tag name PARALLEL_PARTITION.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: remove PARTITION_PART from documentation; Its role is now taken by PARALLEL_PARTITION
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: The purpose field of __<dim_name>_LOC_MIN_MAX is incomplete in metadata.h. Recovered the missing words using metadata_info.pdf
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: 1) Renamed dimVals to dimLens in ReadNC. Suppose a netCDF dimension has a length N, using dimVals could be confusing with the N values stored for that dimension. Similarly, renamed __DIM_VALUES tag to __DIM_LENS.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Some updates for Table 5 in metadata.h.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Reverting change from yesterday that broke tests.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: 9 new changesets
commits-noreply at bitbucket.org
- [MOAB-dev] MSC Software opportunity - MOAB developers..you have our respect
Johnny Prewitt
- [MOAB-dev] commit/MOAB: danwu: Fix compile warning for gs.hpp, gs.cpp and ParallelComm.cpp.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix compile warnings from MBZoltan, including:
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Substantial rewrite of ParallelComm::update_remote_data. Should be a bit faster, maybe.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: In the constructor of Bvh_tree class, the initialization list should use entity_contains( _entity_contains) instead of entity_contains( entity_contains). The compile warning on unused parameter _entity_contains is helpful in finding this bug.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix compile warnings from some header files in src/moab/point_locater
commits-noreply at bitbucket.org
- [MOAB-dev] About reading vtk in parallel mode.
Иля
- [MOAB-dev] Fwd: About reading vtk in parallel mode.
Иля
- [MOAB-dev] commit/MOAB: danwu: Fix a compile warning from tools/mbcslam/process_arm.cpp
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix compile warnings from itaps/imesh/MOAB_iMeshP_unit_tests.cpp
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Cosmetic improvements to the test, and adding exchange tags iterations.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Some error checking and cleaning up of output, and allowing input of arbitrary grid size.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix some more compile warnings from unit tests.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Add real option processing and timing data collection/reporting.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Use a better way to fix [-Wunused-parameter] warnings.
commits-noreply at bitbucket.org
- [MOAB-dev] buildbot failure in moab-intel: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-serial: failed compile
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-32bit-handles: failed compile
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-bare: failed compile
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-ser: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-ser-sta: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] commit/MOAB: iulian07: typo catched by serial builds
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: fix the shared parallel builds.
commits-noreply at bitbucket.org
- [MOAB-dev] Fwd: Interface: Partitioner
Tim Tautges
- [MOAB-dev] commit/MOAB: iulian07: test jenkins, please ignore
commits-noreply at bitbucket.org
- [MOAB-dev] Simple code to reproduce ICC segmentation fault
Tim Tautges
- [MOAB-dev] commit/MOAB: danwu: The unit test scdseq_test failed on gnep build machine (ICC 12, with -O2 and -DNDEBUG). For a few periodic arrays, the sizes have not been updated from 2 to 3. This will lead to potential buffer overflow and undefined behavior.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Minor updates on some comments.
commits-noreply at bitbucket.org
- [MOAB-dev] [Nek5000-users] Running MOAB example
Iulian Grindeanu
- [MOAB-dev] SCDMesh for meshing IGES geometry
Rajeev Jain
- [MOAB-dev] commit/MOAB: janehu: Added missing info for moab user's manual.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: correct current version 4.6.3pre on Version4.6 dev branch
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Moving FileOptions.hpp to moab/, making part of the externally-visible API.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: One more place I forgot to change FileOptions include, and some small changes to .gitignore.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Rename topological_connectivity, which I never understand, with corners_only, which is easier to understand.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: If no coordinates are given for structured mesh, initialize coords with
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Adding a CpuTimer class, originally implemented in WriteHDF5.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Removing unnecessary author/date and license comments, and adding operator==.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Matrix3: adding array() functions like those in CartVect
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Getting rid of all the individual .h files in src/moab/point_locator/lotte/
commits-noreply at bitbucket.org
- [MOAB-dev] Build failed in Jenkins: moab_serial #73
jenkins-ci at mcs.anl.gov
- [MOAB-dev] commit/MOAB: tautges: Forgot to add this.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Forgot this one too.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: moab/FileOptions.hpp again
commits-noreply at bitbucket.org
- [MOAB-dev] Build failed in Jenkins: moab_serial #77
jenkins-ci at mcs.anl.gov
- [MOAB-dev] commit/MOAB: tautges: Damn, forgot these. Sigh.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: file missing in distribution and pgi compiler needs a double or float in sqrt
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: More changes for minimizing files touched in my upcoming pull request.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Minor code changes for NCHelper.cpp
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: 35 new changesets
commits-noreply at bitbucket.org
- [MOAB-dev] Build failed in Jenkins: moab_serial #82
jenkins-ci at mcs.anl.gov
- [MOAB-dev] commit/MOAB: tautges: Fixing problem detected by Jenkins tester.
commits-noreply at bitbucket.org
- [MOAB-dev] some errors I met I build moab
魏华祎
- [MOAB-dev] commit/MOAB: iulian07: remove point search tool
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: data() is not part of std::vector
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: std::vector.data() again
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Fixing mcnpmit, not sure how I missed this one before.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: 20 new changesets
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Fixing the problem where autoreconf -fi gives a warning about non-portable syntax.
commits-noreply at bitbucket.org
- [MOAB-dev] MOAB git branching model
Tim Tautges
- [MOAB-dev] commit/MOAB: rajeeja: Added testcase mergemesh_test.cpp, MergeMesh algorithm needs changes when merging higher dimension entities
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: rajeeja: adding to Makefile.am
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: rajeeja: removing internal quads/edges
commits-noreply at bitbucket.org
- [MOAB-dev] Build failed in Jenkins: moab_serial #92
jenkins-ci at mcs.anl.gov
- [MOAB-dev] commit/MOAB: rajeeja: temp fix
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Add -fstack-protector-all option for g++ and gcc in debug mode, to detect possible stack smashing bugs. If src/ScdInterface.cpp is reverted to a version before the fix for array index out of bounds, unit scdseq_test will terminate during make check, with <stack smashing detected> message.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Remove two -Wunused-variable warnings from tools/mbcslam/Intx2MeshOnSphere.cpp.
commits-noreply at bitbucket.org
- [MOAB-dev] buildbot failure in moab-bare: failed test
moab-dev at mcs.anl.gov
- [MOAB-dev] commit/MOAB: iulian07: fix mergemesh test
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Initialize some variables in NCHelperHOMME.cpp, found by Rajeev using cppcheck.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: do not include Error.hpp in Coupler.hpp
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: fix the mergemesh test
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix a minor memory leak issue in examples/HelloMOAB.cpp. It seems that cppcheck is not able to detect it.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: linear tet constructor
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Delete MOAB instance at the end of main() for some examples.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: linear tet constructor issue
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix memory leak in unit test kd_tree_time.cpp. This was found by cppcheck.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix memory leaks for some files in tools folder.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Delete MOAB instance if return early in main() for some examples.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix some issues of MBZoltan:
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix memory leaks for some unit test files.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix memory leak for three files in src folder and one file in examples folder.
commits-noreply at bitbucket.org
- [MOAB-dev] MOAB Build with Open MPI
Tim Tautges
- [MOAB-dev] commit/MOAB: danwu: Fix memory leak for itaps/imesh/testc_cbind.cpp, especially when some functions return early with errors.
commits-noreply at bitbucket.org
- [MOAB-dev] pull-request Tqdcfr.cpp
Lukasz Kaczmarczyk
- [MOAB-dev] commit/MOAB: iulian07: default value for PARALLEL_PARTITION tag
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: At the beginning of ParallelComm::set_sharing_data(), unset PSTATUS_MULTISHARED flag if new nump is less than 3 (old code before commit 4c1554a performs this check). When reading MPAS files on 3 or more processors, this fix will make the recently added (by commit 4c1554a) consistency assertion below pass.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Initial code change to pad polygons for MPAS reader (fill the connectivity array with the last vertex handle). As a result, only one polygon sequence is created instead of multiple sequences. A new read option NO_MIXED_ELEMENTS should be set to test this feature.
commits-noreply at bitbucket.org
- [MOAB-dev] Confusion between classes and executables in tools dir
Tim Tautges
- [MOAB-dev] commit/MOAB: danwu: Update unit test read_mpas_nc to test NO_MIXED_ELEMENTS read option in serial mode.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: adjacency avoidance for geometric methods
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Updated MPAS reader and some unit tests. If NO_MIXED_ELEMENTS read option is set, on the processor that creates the gather set, all cells (including the gather cells) will be in one contiguous chunk.
commits-noreply at bitbucket.org
- [MOAB-dev] Build failed in Jenkins: moab_serial #119
jenkins-ci at mcs.anl.gov
- [MOAB-dev] commit/MOAB: danwu: In serial build, psize of all cells (including the gather cells) is always 1 for MPAS reader.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: intersection changes
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Current MPAS reader will pad all cells to 10-vertex polygons. Per Iulian's suggestion, it can use the local maxEdgesPerCell on each processor, instead of the global one (usually 10) reported in the MPAS file. If an MPAS file has only pentagons and hexagons, only 12 pentagons need to be padded to hexagons. This will greatly reduce memory usage when reading huge MPAS files.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: down adjacency for padded polygons
commits-noreply at bitbucket.org
- [MOAB-dev] mixed mesh question
Carlos Breviglieri
- [MOAB-dev] commit/MOAB: danwu: Do a MPI_Allreduce(collective call) to compute a common maxEdgesPerCell used across all processors. If maxEdgesPerCell is decided locally on each processor, it might have problems when ghosting.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Update metadata_info documents for recently introduced read option NO_MIXED_ELEMENTS.
commits-noreply at bitbucket.org
- [MOAB-dev] Attaching a C++ class to Mesh entities?
Anthony Scopatz
- [MOAB-dev] Trouble Creating AEntities
Chris Eldred
- [MOAB-dev] commit/MOAB: danwu: Reduce memory usage of MPAS reader greatly, especially when the MPAS file is huge (e.g. 65M cells). This is done by removing some expensive containers, or using MOAB allocated memory storage temporarily. Further reduction will be considered.
commits-noreply at bitbucket.org
- [MOAB-dev] Some MOAB capability questions
Chris Eldred
- [MOAB-dev] commit/MOAB: iulian07: align ibase.h versions
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: use mbzoltan for partitioning in MPAS reader
commits-noreply at bitbucket.org
- [MOAB-dev] buildbot failure in moab-pgi: failed compile
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-par: failed compile
moab-dev at mcs.anl.gov
- [MOAB-dev] commit/MOAB: iulian07: fix parallel builds configured without mbzoltan
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: more mbzoltan exposure to the world
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: even more exposure for mbzoltan
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: mbzoltan exposure again
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Add temporary read option NO_EDGES to test MPAS reader using Zoltan partition.
commits-noreply at bitbucket.org
- [MOAB-dev] Build failed in Jenkins: moab_par_zoltan #2
jenkins-ci at mcs.anl.gov
- [MOAB-dev] Fortran interface to MOAB
kanaev at ibrae.ac.ru
- [MOAB-dev] commit/MOAB: danwu: NCHelperMPAS::create_mesh() is too complicated to read or debug. Rewrite it with some shorter helper functions.
commits-noreply at bitbucket.org
- [MOAB-dev] ANL Moab Site
Andrew Davis
- [MOAB-dev] commit/MOAB: danwu: Thanks for Jayesh Krishna to point out this bug. In NCHelperEuler.cpp and NCHelperFV.cpp, ss_tag_name.clear() does not empty the string (it just clears the eof flag on the string). One possible solution is to use the str("") gimmick, so that we can still reuse the same stringstream object. We pick another solution that moves the definition of ss_tag_name inside the loops, so we do not clear anymore, and the code will be easier to understand.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: memory management bug
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: In read_nc unit test, check some tags with double-underscore in the name. It would fail for revisions before commit e7850db (fixed a bug related to stringstream: ss_tag_name.clear() does not empty the string).
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: rajeeja: Without this typecasting, MOAB wouldn't compile on a MacOSX, error: invalid operands to binary expression (std::ostream (aka basic_ostream<char>) and const char [8])
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: correct a bug
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: MPAS reader padding
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: simplify padding in MPAS
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: repartition changes for MPAS reader
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: When reading cell variables with Zoltan partition and mixed elements options, the conversion from global cell index to local cell index is incorrect (only works for trivial partition) and causes vector buffer overflow. Fixed this bug with some other minor changes.
commits-noreply at bitbucket.org
- [MOAB-dev] loading a VTK mesh in parallel (.pvtu)
Lorenzo Alessio Botti
- [MOAB-dev] commit/MOAB: danwu: In NCHelperEuler, restore previously deleted tags __<dim_name>_LOC_MINMAX, __<dim_name>_LOC_VALS and __<dim_name>_GLOBAL_MINMAX for two virtual dimensions (slon and slat).
commits-noreply at bitbucket.org
- [MOAB-dev] buildbot failure in moab-occ-sertru: failed configure
moab-dev at mcs.anl.gov
- [MOAB-dev] Build failed in Jenkins: moab_par #667
jenkins-ci at mcs.anl.gov
- [MOAB-dev] commit/MOAB: danwu: Rename NCHelper::init_dims_with_no_cvars_info() to init_dims_with_no_coord_vars_info(), and apply it in NCHelperMPAS::init_mesh_vals(), to create dummy tags for MPAS dimensions that do not have corresponding coordinate variables. Also, in NCHelper::read_variable_to_set_allocate(), there is no need to allocate space for the dummy tags.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Fix assertion failures from read_ucd_nc and read_mpas_nc unit tests. In NCHelper::read_variable_to_set(), we should not convert or set tag data for a dummy variable.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Updated MeshFiles/unittest/io/mpasx1.642.t.2.nc with full artificial values for cell variable ke (e.g. 15.001 stands for 1st time step, pentagon, global cell index 1; 26.642 stands for 2nd time step, hexagon, global cell index 642), and updated the affected MPAS reader unit tests. Will modify the unit tests to check more values read from ke later.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Optimize gather set code for MPAS reader. Use Range as the element type for gather_set_cells_with_n_edges array, instead of using vector. In create_gather_set_edges(), vertices_on_gather_set_edges can use MOAB allocated memory storage for conn_arr_gather_set_edges. In create_padded_gather_set_cells(), vertices_on_gather_set_cells can use MOAB allocated memory storage for conn_arr_gather_set_cells.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Thanks for Jayesh to find this bug. ParallelComm::gather_data() does not correctly handle the case when the gather set cell entities are not contiguous (e.g. MPAS gather set cells created without NO_MIXED_ELEMENTS read option). The destination of memcpy() is only for the first sequence of the cells, while the source is for all cells, causing invalid write and stack smashing. To fix it, we use a temp buffer for memcpy(), and then set tag data on each sequence of cells separately.
commits-noreply at bitbucket.org
- [MOAB-dev] buildbot failure in moab-cub-par-nopnet: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] commit/MOAB: danwu: Better logic to test whether gents has multiple sequences in ParallelComm::gather_data().
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: In ParallelComm::gather_data(), current code that copies tag data to each sequence of gents is incorrect (bytes per tag should be taken into account).
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: In unit test read_mpas_nc, added test_read_no_edges() and test_gather_onevar(). Also removed gather set testing code from test_read_onevar().
commits-noreply at bitbucket.org
- [MOAB-dev] memory leak
Lukasz Kaczmarczyk
- [MOAB-dev] buildbot failure in moab-cub-par-tru-dbg: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] moab builds configured with cgm
Iulian Grindeanu
- [MOAB-dev] Geodesic mesh representation
Chris Eldred
- [MOAB-dev] commit/MOAB: danwu: For GATHER_SET=<gatherSetRank> read option, allow ParallelComm::gather_data() to specify a root processor to gather data. Also, changed new/delete to malloc/free for the temp buffer.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: If --enable-mbzoltan is configured, HAVE_ZOLTAN macro should be defined for the Makefile in test/parallel.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Updated parallel unit test for MPAS reader. Gather set is tested separately. Partition result is tested and more cell variable values are checked (can detect some previously fixed bugs). Parallel reading result h5m files are generated differently (trivial partition vs Zoltan partition, mixed_elements vs no_mixed_elements).
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: For consistency, add macro HAVE_ZOLTAN to top-level AM_CPPFLAGS in configure.ac (similar to NETCDF_FILE and HDF5_FILE). Also remove it from src/Makefile.am, src/io/Makefile.am, and test/parallel/Makefile.am.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Allow a parallel MOAB build with netcdf (but without pnetcdf) to use Zoltan partition for MPAS reader.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Update unit test read_mpas_nc for MPAS reader.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: 40 new changesets
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Compare the number of elements with correct expected result in ScdNCHelper::check_existing_mesh().
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Besides nVertLevels, should support other optional levels (e.g. nVertLevelsP1) for MPAS reader, in progress.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: do not set unused correlation tags
commits-noreply at bitbucket.org
- [MOAB-dev] Which version Zoltan can work well with Moab?
"魏华祎(Wei, Huayi)"
- [MOAB-dev] commit/MOAB: iulian07: replace -h with -H in ghost option
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Comment out the code to check the number of elements in ScdNCHelper::check_existing_mesh(), as it does not work at this time when ghosting is used.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Merge ScdNCHelper::read_scd_variable_setup() and UcdNCHelper::read_ucd_variable_setup() to NCHelper::read_variable_setup() with simplified logic. MPAS reader can now read variables such as snow(Time, nCells) and smois(Time, nCells, nSoilLevels).
commits-noreply at bitbucket.org
- [MOAB-dev] netcdf nc_max_dims exceeded
Rajeev Jain
- [MOAB-dev] Questions about side_number
Chris Eldred
- [MOAB-dev] commit/MOAB: danwu: Ignore some MPAS variables such as topological information. For all NC helpers, determine the entity location type and number of levels in init_mesh_vals(), with some minor changes.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Take out legacy dummy var info things. For a dimension that does not have a corresponding coordinate variable (e.g. ncol for HOMME, nCells for MPAS), create a sparse tag with the dimension name to store the dimension length. This is done directly in NCHelper::create_tags_for_dims_with_no_coord_vars(), and ReadNC::dummyVarNames is no longer used.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: For a dimension that does not have a corresponding coordinate variable (e.g. ncol for HOMME, nCells for MPAS), besides a sparse tag to store the dimension length, a dummy variable in ReadNC::varInfo is still needed to create some conventional tags like __<var_name>_DIMS.
commits-noreply at bitbucket.org
- [MOAB-dev] Question about iMesh and Fortran 90/2003
Chris Eldred
- [MOAB-dev] commit/MOAB: tautges: 1. In unpack_entities, for interface entities, make sure lowest-rank proc is first.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Put some comments in structured3 about what kind of mesh is created.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Merge branch 'tautges/par-owner-fix'
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Create a Fortran90 example that pushes mesh into parallel MOAB, then resolves shared entities
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Updating .gitignore for new example.
commits-noreply at bitbucket.org
- [MOAB-dev] Order of entities returned by iMesh_getEntAdj
Chris Eldred
- [MOAB-dev] problem with exchange_ghost_cells
Lorenzo Alessio Botti
- [MOAB-dev] commit/MOAB: danwu: For a dummy dimension variable, the corresponding sparse tag should be variable length, so that ParNCL can read it with generic code.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Test reading HOMME dimension variables, including lev (regular) and ncol (dummy).
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: first pass at CGNS reader / writer
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Add a test case to test reading FV grid with ghosting. It is provided by Jayesh, which shows a typical ParGAL read behavior for an FV grid variable. It failed on 4 processors before the ghosting issues with ownership were recently fixed.
commits-noreply at bitbucket.org
- [MOAB-dev] Build failed in Jenkins: moab_serial #179
jenkins-ci at mcs.anl.gov
- [MOAB-dev] commit/MOAB: danwu: For serial MOAB, new test case test_read_fv_ghosting() should be skipped.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: inform the user about changing the writer
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: In NCHelper::create_conventional_tags(), when creating tag __<dim_name>_LOC_MINMAX and tag __<dim_name>_LOC_VALS for time dimension, the name could also be Time (e.g. for MPAS) or t instead of time.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Add comments to MPAS reader on two possible types for xtime variable.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Most users will never ask to read the entire dataset into memory at once. If they do so, it is OK to skip some variables. But in general, allow users to specify any variable in the netcdf file to read.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Users might create more than one file set to read the same file. The tag values of dummy dimension variables should be set for every file set. Thanks to Jayesh for finding this bug.
commits-noreply at bitbucket.org
- [MOAB-dev] AdaptiveKDTree Settings equivalent
Patrick Shriwise
- [MOAB-dev] commit/MOAB: iulian07: make distcheck fix
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: In test_read_dim_vars() for HOMME, create another file set to read the same file, and verify that the dimension variables still have correct tag values on this file set.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: In unit test read_ucd_nc, added test_gather_onevar(). Also removed gather set testing code from test_read_onevar().
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: For set variables, the memory allocated by read_variable_to_set_allocate() can be deleted after tag_set_by_ptr() is called.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Use delete[] to free the memory allocated by read_variable_to_set_allocate().
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: To delete the memory allocated by read_variable_to_set_allocate(), data types should be consistent with new.
commits-noreply at bitbucket.org
- [MOAB-dev] buildbot failure in moab-cgns: failed shell test install
moab-dev at mcs.anl.gov
- [MOAB-dev] commit/MOAB: danwu: In ScdNCHelper::read_scd_variable_to_nonset(), the values of ni and nj are incorrectly swapped. Fortunately, this have not caused any bugs so far, as we can verify or even prove that kji_to_jik(ni, nj, nk, ...) produces the same result as kji_to_jik(nj, ni, nk, ...). For code clarity and consistency, ni, nj and nk are set such that ni stands for lon (or slon), nj stands for lat (or slat) and nk stands for lev.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: LloydSmoother: proper handling of communicator.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: include EigenDecomp into Matrix3 and move Push F90 example into imesh
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: reformat the gs.cpp and TupleList.cpp files
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: tautges: Adding a few ignore items.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: remove the Push example from itaps/imesh
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Reduced readStarts and readCounts to 1D vectors inside ReadNC::VarData, and refactored reading variables code for all NC readers. It has passed all unit tests with make check.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: iulian07: remove dependency of mbcslam to mbcoupler
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Fixed the bug Andy Davis reported for getting graphics for edges, the first tol is angle tolerance, in degree.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Changed calling function for get_graphics for cubit13.1 and above. Cubit12.2 and below remains the same.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Used the old version of code just now, this is the updated one.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: janehu: Cubit14.0 changed signature of RefEntityName::get_refentity_name, so changed the calling function in moab. Builds successfully, make check failed test/io/stl_test.
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: In unit test stl_test.cc, it seems that the pointer tmp_file can be unexpectedly modified by Cubit14 to an invalid memory address. A simple workaround is to use the static keyword, making tmp_file a file scoped variable that can only be accessed within stl_test.cc
commits-noreply at bitbucket.org
- [MOAB-dev] commit/MOAB: danwu: Update metadata_info documents for read option NO_EDGES.
commits-noreply at bitbucket.org
- [MOAB-dev] Neumann boundary condition
kanaev at ibrae.ac.ru
- [MOAB-dev] latest .cub format
kanaev at ibrae.ac.ru
- [MOAB-dev] commit/MOAB: iulian07: cubit 14 format change
commits-noreply at bitbucket.org
- [MOAB-dev] buildbot failure in moab-occ-ser-sta: failed configure
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-ser: failed configure
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-cub-ser-trunk: failed configure
moab-dev at mcs.anl.gov
- [MOAB-dev] buildbot failure in moab-occ-sersta-trunk: failed configure
moab-dev at mcs.anl.gov
- [MOAB-dev] commit/MOAB: iulian07: correct the partest test
commits-noreply at bitbucket.org
- [MOAB-dev] FileOptions
Patrick Shriwise
- [MOAB-dev] moab-4.6.2
Choi, Hangbok
- [MOAB-dev] commit/MOAB: iulian07: transport example in imeshp and fortran
commits-noreply at bitbucket.org
Last message date:
Tue Dec 31 16:37:30 CST 2013
Archived on: Tue Dec 31 16:37:35 CST 2013
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