[Swift-user] Block task failed on Tukey/Cobalt

[Justin M Wozniak]

Let's add a bugzilla entry to make sure this error is reported clearly.

On 02/11/2014 11:12 AM, Ketan Maheshwari wrote:
> This was fixed after changing the default project from the expired 
> atpesc to ExM.
>
> Thanks!
>
>
> On Tue, Feb 11, 2014 at 10:51 AM, David Kelly <davidkelly at uchicago.edu 
> <mailto:davidkelly at uchicago.edu>> wrote:
>
>     The Cobalt provider submits jobs via the command line rather than
>     a submit script, so I believe empty submit scripts are normal.
>     From the log it looks like jobs are getting submitted and getting
>     a job number. Are you running from a filesystem that is shared on
>     worker nodes?
>
>
>     On Tue, Feb 11, 2014 at 10:12 AM, Ketan Maheshwari
>     <ketan at mcs.anl.gov <mailto:ketan at mcs.anl.gov>> wrote:
>
>         Swift Tutorial scripts worked on Tukey as of last August
>         during the ATPESC tutorials.
>
>         I find that empty Cobalt submit script files are created.
>
>
>         On Tue, Feb 11, 2014 at 9:27 AM, Justin M Wozniak
>         <wozniak at mcs.anl.gov <mailto:wozniak at mcs.anl.gov>> wrote:
>
>
>             Has anyone else run successfully on Tukey?
>
>             Can you inspect/post the Swift-generated Cobalt submit
>             script? You may also want to inspect/post the
>             Cobalt-generated *.submit.stdout/*.submit.stderr logs.
>
>             On 02/10/2014 08:23 PM, Ketan Maheshwari wrote:
>>             Hi,
>>
>>             Trying some Swift test for Swift-Galaxy demo on Tukey.
>>             Using local:cobalt coaster provider. I am getting the
>>             following error:
>>
>>             $ swift -sites.file sites.xml -tc.file tc -config cf
>>             script.swift
>>             Swift 0.94 swift-r6637 cog-r3742
>>
>>             RunID: 20140211-0216-ryo7slj7
>>             Progress:  time: Tue, 11 Feb 2014 02:16:53 +0000
>>             Progress:  time: Tue, 11 Feb 2014 02:17:23 +0000  Submitted:3
>>             Progress:  time: Tue, 11 Feb 2014 02:17:53 +0000  Submitted:3
>>             Progress:  time: Tue, 11 Feb 2014 02:17:58 +0000
>>              Submitted:2  Active:1
>>             Execution failed:
>>             Exception in sh:
>>                 Arguments:
>>             [gpfs/mira-home/ketan/galaxy-dist/database/files/000/dataset_1.dat,
>>             0]
>>                 Host: tukey
>>                 Directory:
>>             script-20140211-0216-ryo7slj7/jobs/u/sh-uv25u9ml
>>             Caused by:
>>             Block task failed:
>>
>>
>>             anapp, script.swift, line 13
>>
>>             Tried many different options in swift.properties to no
>>             avail.
>>
>>             Also tried the ATPESC 2013 tutorial setup but scripts
>>             fail with same pattern/error messages.
>>
>>             Attaching the tarball with config, sites file.
>>
>>             Thanks for any suggestions.
>>
>>             Ketan
>>
>>
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>
>
>             -- 
>             Justin M Wozniak
>
>
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-- 
Justin M Wozniak

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