[Swift-user] Block task failed on Tukey/Cobalt

[Ketan Maheshwari]

This was fixed after changing the default project from the expired atpesc
to ExM.

Thanks!


On Tue, Feb 11, 2014 at 10:51 AM, David Kelly <davidkelly at uchicago.edu>wrote:

> The Cobalt provider submits jobs via the command line rather than a submit
> script, so I believe empty submit scripts are normal. From the log it looks
> like jobs are getting submitted and getting a job number. Are you running
> from a filesystem that is shared on worker nodes?
>
>
> On Tue, Feb 11, 2014 at 10:12 AM, Ketan Maheshwari <ketan at mcs.anl.gov>wrote:
>
>> Swift Tutorial scripts worked on Tukey as of last August during the
>> ATPESC tutorials.
>>
>> I find that empty Cobalt submit script files are created.
>>
>>
>> On Tue, Feb 11, 2014 at 9:27 AM, Justin M Wozniak <wozniak at mcs.anl.gov>wrote:
>>
>>>
>>> Has anyone else run successfully on Tukey?
>>>
>>> Can you inspect/post the Swift-generated Cobalt submit script? You may
>>> also want to inspect/post the Cobalt-generated
>>> *.submit.stdout/*.submit.stderr logs.
>>>
>>> On 02/10/2014 08:23 PM, Ketan Maheshwari wrote:
>>>
>>> Hi,
>>>
>>>  Trying some Swift test for Swift-Galaxy demo on Tukey. Using
>>> local:cobalt coaster provider. I am getting the following error:
>>>
>>>  $ swift -sites.file sites.xml -tc.file tc -config cf script.swift
>>> Swift 0.94 swift-r6637 cog-r3742
>>>
>>>  RunID: 20140211-0216-ryo7slj7
>>> Progress:  time: Tue, 11 Feb 2014 02:16:53 +0000
>>> Progress:  time: Tue, 11 Feb 2014 02:17:23 +0000  Submitted:3
>>> Progress:  time: Tue, 11 Feb 2014 02:17:53 +0000  Submitted:3
>>> Progress:  time: Tue, 11 Feb 2014 02:17:58 +0000  Submitted:2  Active:1
>>> Execution failed:
>>>  Exception in sh:
>>>     Arguments:
>>> [gpfs/mira-home/ketan/galaxy-dist/database/files/000/dataset_1.dat, 0]
>>>     Host: tukey
>>>     Directory: script-20140211-0216-ryo7slj7/jobs/u/sh-uv25u9ml
>>> Caused by:
>>>  Block task failed:
>>>
>>>
>>>  anapp, script.swift, line 13
>>>
>>>  Tried many different options in swift.properties to no avail.
>>>
>>>  Also tried the ATPESC 2013 tutorial setup but scripts fail with same
>>> pattern/error messages.
>>>
>>>  Attaching the tarball with config, sites file.
>>>
>>>  Thanks for any suggestions.
>>>
>>>  Ketan
>>>
>>>
>>> _______________________________________________
>>> Swift-user mailing listSwift-user at ci.uchicago.eduhttps://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user
>>>
>>>
>>>
>>> --
>>> Justin M Wozniak
>>>
>>>
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>>
>>
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