[Swift-user] Block task failed on Tukey/Cobalt

[Ketan Maheshwari]

There is bug 1185 filed already:
https://bugzilla.mcs.anl.gov/swift/show_bug.cgi?id=1185


On Tue, Feb 11, 2014 at 11:23 AM, Justin M Wozniak <wozniak at mcs.anl.gov>wrote:

>
> Let's add a bugzilla entry to make sure this error is reported clearly.
>
> On 02/11/2014 11:12 AM, Ketan Maheshwari wrote:
>
> This was fixed after changing the default project from the expired atpesc
> to ExM.
>
>  Thanks!
>
>
> On Tue, Feb 11, 2014 at 10:51 AM, David Kelly <davidkelly at uchicago.edu>wrote:
>
>>  The Cobalt provider submits jobs via the command line rather than a
>> submit script, so I believe empty submit scripts are normal. From the log
>> it looks like jobs are getting submitted and getting a job number. Are you
>> running from a filesystem that is shared on worker nodes?
>>
>>
>>  On Tue, Feb 11, 2014 at 10:12 AM, Ketan Maheshwari <ketan at mcs.anl.gov>wrote:
>>
>>> Swift Tutorial scripts worked on Tukey as of last August during the
>>> ATPESC tutorials.
>>>
>>>  I find that empty Cobalt submit script files are created.
>>>
>>>
>>> On Tue, Feb 11, 2014 at 9:27 AM, Justin M Wozniak <wozniak at mcs.anl.gov>wrote:
>>>
>>>>
>>>> Has anyone else run successfully on Tukey?
>>>>
>>>> Can you inspect/post the Swift-generated Cobalt submit script? You may
>>>> also want to inspect/post the Cobalt-generated
>>>> *.submit.stdout/*.submit.stderr logs.
>>>>
>>>> On 02/10/2014 08:23 PM, Ketan Maheshwari wrote:
>>>>
>>>>  Hi,
>>>>
>>>>  Trying some Swift test for Swift-Galaxy demo on Tukey. Using
>>>> local:cobalt coaster provider. I am getting the following error:
>>>>
>>>>  $ swift -sites.file sites.xml -tc.file tc -config cf script.swift
>>>> Swift 0.94 swift-r6637 cog-r3742
>>>>
>>>>  RunID: 20140211-0216-ryo7slj7
>>>> Progress:  time: Tue, 11 Feb 2014 02:16:53 +0000
>>>> Progress:  time: Tue, 11 Feb 2014 02:17:23 +0000  Submitted:3
>>>> Progress:  time: Tue, 11 Feb 2014 02:17:53 +0000  Submitted:3
>>>> Progress:  time: Tue, 11 Feb 2014 02:17:58 +0000  Submitted:2  Active:1
>>>> Execution failed:
>>>>  Exception in sh:
>>>>     Arguments:
>>>> [gpfs/mira-home/ketan/galaxy-dist/database/files/000/dataset_1.dat, 0]
>>>>     Host: tukey
>>>>     Directory: script-20140211-0216-ryo7slj7/jobs/u/sh-uv25u9ml
>>>> Caused by:
>>>>  Block task failed:
>>>>
>>>>
>>>>  anapp, script.swift, line 13
>>>>
>>>>  Tried many different options in swift.properties to no avail.
>>>>
>>>>  Also tried the ATPESC 2013 tutorial setup but scripts fail with same
>>>> pattern/error messages.
>>>>
>>>>  Attaching the tarball with config, sites file.
>>>>
>>>>  Thanks for any suggestions.
>>>>
>>>>  Ketan
>>>>
>>>>
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>>>>
>>>>
>>>>
>>>> --
>>>> Justin M Wozniak
>>>>
>>>>
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>>>
>>>
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>
>
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> --
> Justin M Wozniak
>
>
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