<div dir="ltr">This was fixed after changing the default project from the expired atpesc to ExM.<div><br></div><div>Thanks!</div></div><div class="gmail_extra"><br><br><div class="gmail_quote">On Tue, Feb 11, 2014 at 10:51 AM, David Kelly <span dir="ltr"><<a href="mailto:davidkelly@uchicago.edu" target="_blank">davidkelly@uchicago.edu</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div class=""><div dir="ltr">The Cobalt provider submits jobs via the command line rather than a submit script, so I believe empty submit scripts are normal. From the log it looks like jobs are getting submitted and getting a job number. Are you running from a filesystem that is shared on worker nodes?</div>
</div><div class="gmail_extra"><br><br><div class="gmail_quote"><div class="">On Tue, Feb 11, 2014 at 10:12 AM, Ketan Maheshwari <span dir="ltr"><<a href="mailto:ketan@mcs.anl.gov" target="_blank">ketan@mcs.anl.gov</a>></span> wrote:<br>
</div><div><div class="h5"><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Swift Tutorial scripts worked on Tukey as of last August during the ATPESC tutorials. <div>
<br></div><div>
I find that empty Cobalt submit script files are created.</div></div><div><div><div class="gmail_extra"><br><br>
<div class="gmail_quote">On Tue, Feb 11, 2014 at 9:27 AM, Justin M Wozniak <span dir="ltr"><<a href="mailto:wozniak@mcs.anl.gov" target="_blank">wozniak@mcs.anl.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div text="#000000" bgcolor="#FFFFFF"><div>
<div><br>
Has anyone else run successfully on Tukey? <br>
<br>
Can you inspect/post the Swift-generated Cobalt submit script? You
may also want to inspect/post the Cobalt-generated
*.submit.stdout/*.submit.stderr logs.<br>
<br>
On 02/10/2014 08:23 PM, Ketan Maheshwari wrote:<br>
</div>
</div><blockquote type="cite"><div><div>
<div dir="ltr">Hi,
<div><br>
</div>
<div>Trying some Swift test for Swift-Galaxy demo on Tukey.
Using local:cobalt coaster provider. I am getting the
following error:</div>
<div><br>
</div>
<div>
<div>$ swift -sites.file sites.xml -tc.file tc -config cf
script.swift</div>
<div>Swift 0.94 swift-r6637 cog-r3742</div>
<div><br>
</div>
<div>RunID: 20140211-0216-ryo7slj7</div>
<div>Progress: time: Tue, 11 Feb 2014 02:16:53 +0000</div>
<div>Progress: time: Tue, 11 Feb 2014 02:17:23 +0000
Submitted:3</div>
<div>Progress: time: Tue, 11 Feb 2014 02:17:53 +0000
Submitted:3</div>
<div>Progress: time: Tue, 11 Feb 2014 02:17:58 +0000
Submitted:2 Active:1</div>
<div>Execution failed:</div>
<div><span style="white-space:pre-wrap"> </span>Exception
in sh:</div>
<div> Arguments:
[gpfs/mira-home/ketan/galaxy-dist/database/files/000/dataset_1.dat,
0]</div>
<div> Host: tukey</div>
<div> Directory:
script-20140211-0216-ryo7slj7/jobs/u/sh-uv25u9ml</div>
<div>Caused by:</div>
<div>
<span style="white-space:pre-wrap"> </span>Block task
failed:</div>
<div><br>
</div>
<div><br>
</div>
<div><span style="white-space:pre-wrap"> </span>anapp,
script.swift, line 13</div>
</div>
<div><br>
</div>
<div>Tried many different options in swift.properties to no
avail. </div>
<div><br>
</div>
<div>Also tried the ATPESC 2013 tutorial setup but scripts fail
with same pattern/error messages.</div>
<div><br>
</div>
<div>Attaching the tarball with config, sites file.</div>
<div><br>
</div>
<div>Thanks for any suggestions.</div>
<div><br>
</div>
<div>Ketan</div>
</div>
<br>
<fieldset></fieldset>
<br>
</div></div><div><pre>_______________________________________________
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</div></blockquote><span><font color="#888888">
<br>
<br>
<pre cols="72">--
Justin M Wozniak</pre>
</font></span></div>
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