[Swift-user] trunk-cobalt block task ended prematurely

[Ketan Maheshwari]

This is the first time I am trying with 0.96.

The generated qsub command indeed does not have "--mode script" which seems
to be causing the issue.

Thanks,
Ketan

On Mon, Mar 2, 2015 at 4:02 PM, Michael Wilde <wilde at anl.gov> wrote:

>  Is this the first time you've tried running 0.96 on the BG/Q in subjob
> mode?
> (I.e., has this ever worked before?)
>
> Did you get a submission script in the run directory (or a log of the
> cobalt qsub or cqsub command) which you could test manually?
>
> If 0.96 is rejecting the "script" property, it seems possible that 0.96 is
> generating an invalid qsub command and/or submission script.
>
> - Mike
>
>
>
> On 3/2/15 3:47 PM, Ketan Maheshwari wrote:
>
> I trying to run on BG/Q with local:cobalt with trunk but Swift crashes
> with the following error:
>
>  Caused by: Exception in bgsh:
>     Arguments: [/home/ketan/SwiftApps/subjobs/mpicatsnsleep/mpicatnap,
> /gpfs/mira-home/ketan/SwiftApps/subjobs/mpicatsnsleep/./data.txt,
> /gpfs/mira-home/ketan/SwiftApps/subjobs/mpicatsnsleep/./outdir/f.0002.out,
> 1]
>     Host: cluster
>     Directory: catsnsleepmpi-run001/jobs/b/bgsh-3nq3uc5m
>  exception @ swift-int-staging.k, line: 165
> Caused by:
>  exception @ swift-int-staging.k, line: 160
> Caused by: Block task failed: 0302-2109420-000000 Block task ended
> prematurely
>
>  In the log, I see the qsub call being made and a jobid is returned.
> However, I could not figure what is the cause for the task to fail.
>
>  One more thing I noticed when translating from old sites conf to new is
> that the new conf did not accept the property "globus:mode = script".
>
>  A full run log is attached. Thanks for any suggestions.
>
>  Thanks,
> Ketan
>
>
> _______________________________________________
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>
>
> --
> Michael Wilde
> Mathematics and Computer Science          Computation Institute
> Argonne National Laboratory               The University of Chicago
>
>
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