<div dir="ltr">This is the first time I am trying with 0.96.<div><br></div><div>The generated qsub command indeed does not have "--mode script" which seems to be causing the issue.</div><div><br></div><div>Thanks,</div><div>Ketan</div></div><div class="gmail_extra"><br><div class="gmail_quote">On Mon, Mar 2, 2015 at 4:02 PM, Michael Wilde <span dir="ltr"><<a href="mailto:wilde@anl.gov" target="_blank">wilde@anl.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
  
    
  
  <div bgcolor="#FFFFFF" text="#000000">
    Is this the first time you've tried running 0.96 on the BG/Q in
    subjob mode?<br>
    (I.e., has this ever worked before?)<br>
    <br>
    Did you get a submission script in the run directory (or a log of
    the cobalt qsub or cqsub command) which you could test manually?<br>
    <br>
    If 0.96 is rejecting the "script" property, it seems possible that
    0.96 is generating an invalid qsub command and/or submission script.<br>
    <br>
    - Mike<div><div class="h5"><br>
    <br>
    <br>
    <div>On 3/2/15 3:47 PM, Ketan Maheshwari
      wrote:<br>
    </div>
    </div></div><blockquote type="cite"><div><div class="h5">
      
      <div dir="ltr">I trying to run on BG/Q with local:cobalt with
        trunk but Swift crashes with the following error:
        <div><br>
        </div>
        <div>
          <div>Caused by: Exception in bgsh:</div>
          <div>    Arguments:
            [/home/ketan/SwiftApps/subjobs/mpicatsnsleep/mpicatnap,
            /gpfs/mira-home/ketan/SwiftApps/subjobs/mpicatsnsleep/./data.txt,
            /gpfs/mira-home/ketan/SwiftApps/subjobs/mpicatsnsleep/./outdir/f.0002.out,
            1]</div>
          <div>    Host: cluster</div>
          <div>    Directory: catsnsleepmpi-run001/jobs/b/bgsh-3nq3uc5m</div>
          <div><span style="white-space:pre-wrap"> </span>exception
            @ swift-int-staging.k, line: 165</div>
          <div>Caused by:</div>
          <div><span style="white-space:pre-wrap"> </span>exception
            @ swift-int-staging.k, line: 160</div>
          <div>Caused by: Block task failed: 0302-2109420-000000 Block
            task ended prematurely</div>
        </div>
        <div><br>
        </div>
        <div>In the log, I see the qsub call being made and a jobid is
          returned. However, I could not figure what is the cause for
          the task to fail.</div>
        <div><br>
        </div>
        <div>One more thing I noticed when translating from old sites
          conf to new is that the new conf did not accept the property
          "globus:mode = script".</div>
        <div><br>
        </div>
        <div>A full run log is attached. Thanks for any suggestions.</div>
        <div><br>
        </div>
        <div>Thanks,</div>
        <div>Ketan</div>
      </div>
      <br>
      <fieldset></fieldset>
      <br>
      </div></div><pre>_______________________________________________
Swift-user mailing list
<a href="mailto:Swift-user@ci.uchicago.edu" target="_blank">Swift-user@ci.uchicago.edu</a>
<a href="https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user" target="_blank">https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user</a></pre><span class="HOEnZb"><font color="#888888">
    </font></span></blockquote><span class="HOEnZb"><font color="#888888">
    <br>
    <pre cols="72">-- 
Michael Wilde
Mathematics and Computer Science          Computation Institute
Argonne National Laboratory               The University of Chicago
</pre>
  </font></span></div>

<br>_______________________________________________<br>
Swift-user mailing list<br>
<a href="mailto:Swift-user@ci.uchicago.edu">Swift-user@ci.uchicago.edu</a><br>
<a href="https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user" target="_blank">https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user</a><br></blockquote></div><br></div>