[Swift-user] Block task failed on Tukey/Cobalt

[Ketan Maheshwari]

Filed bug 1199 for Cobalt:
https://bugzilla.mcs.anl.gov/swift/show_bug.cgi?id=1199


On Tue, Feb 11, 2014 at 4:21 PM, Mihael Hategan <hategan at mcs.anl.gov> wrote:

> That's for PBS which is only marginally related to the Cobalt provider.
>
> Mihael
>
> On Tue, 2014-02-11 at 12:35 -0600, Ketan Maheshwari wrote:
> > There is bug 1185 filed already:
> > https://bugzilla.mcs.anl.gov/swift/show_bug.cgi?id=1185
> >
> >
> > On Tue, Feb 11, 2014 at 11:23 AM, Justin M Wozniak <wozniak at mcs.anl.gov
> >wrote:
> >
> > >
> > > Let's add a bugzilla entry to make sure this error is reported clearly.
> > >
> > > On 02/11/2014 11:12 AM, Ketan Maheshwari wrote:
> > >
> > > This was fixed after changing the default project from the expired
> atpesc
> > > to ExM.
> > >
> > >  Thanks!
> > >
> > >
> > > On Tue, Feb 11, 2014 at 10:51 AM, David Kelly <davidkelly at uchicago.edu
> >wrote:
> > >
> > >>  The Cobalt provider submits jobs via the command line rather than a
> > >> submit script, so I believe empty submit scripts are normal. From the
> log
> > >> it looks like jobs are getting submitted and getting a job number.
> Are you
> > >> running from a filesystem that is shared on worker nodes?
> > >>
> > >>
> > >>  On Tue, Feb 11, 2014 at 10:12 AM, Ketan Maheshwari <
> ketan at mcs.anl.gov>wrote:
> > >>
> > >>> Swift Tutorial scripts worked on Tukey as of last August during the
> > >>> ATPESC tutorials.
> > >>>
> > >>>  I find that empty Cobalt submit script files are created.
> > >>>
> > >>>
> > >>> On Tue, Feb 11, 2014 at 9:27 AM, Justin M Wozniak <
> wozniak at mcs.anl.gov>wrote:
> > >>>
> > >>>>
> > >>>> Has anyone else run successfully on Tukey?
> > >>>>
> > >>>> Can you inspect/post the Swift-generated Cobalt submit script? You
> may
> > >>>> also want to inspect/post the Cobalt-generated
> > >>>> *.submit.stdout/*.submit.stderr logs.
> > >>>>
> > >>>> On 02/10/2014 08:23 PM, Ketan Maheshwari wrote:
> > >>>>
> > >>>>  Hi,
> > >>>>
> > >>>>  Trying some Swift test for Swift-Galaxy demo on Tukey. Using
> > >>>> local:cobalt coaster provider. I am getting the following error:
> > >>>>
> > >>>>  $ swift -sites.file sites.xml -tc.file tc -config cf script.swift
> > >>>> Swift 0.94 swift-r6637 cog-r3742
> > >>>>
> > >>>>  RunID: 20140211-0216-ryo7slj7
> > >>>> Progress:  time: Tue, 11 Feb 2014 02:16:53 +0000
> > >>>> Progress:  time: Tue, 11 Feb 2014 02:17:23 +0000  Submitted:3
> > >>>> Progress:  time: Tue, 11 Feb 2014 02:17:53 +0000  Submitted:3
> > >>>> Progress:  time: Tue, 11 Feb 2014 02:17:58 +0000  Submitted:2
>  Active:1
> > >>>> Execution failed:
> > >>>>  Exception in sh:
> > >>>>     Arguments:
> > >>>> [gpfs/mira-home/ketan/galaxy-dist/database/files/000/dataset_1.dat,
> 0]
> > >>>>     Host: tukey
> > >>>>     Directory: script-20140211-0216-ryo7slj7/jobs/u/sh-uv25u9ml
> > >>>> Caused by:
> > >>>>  Block task failed:
> > >>>>
> > >>>>
> > >>>>  anapp, script.swift, line 13
> > >>>>
> > >>>>  Tried many different options in swift.properties to no avail.
> > >>>>
> > >>>>  Also tried the ATPESC 2013 tutorial setup but scripts fail with
> same
> > >>>> pattern/error messages.
> > >>>>
> > >>>>  Attaching the tarball with config, sites file.
> > >>>>
> > >>>>  Thanks for any suggestions.
> > >>>>
> > >>>>  Ketan
> > >>>>
> > >>>>
> > >>>>   _______________________________________________
> > >>>> Swift-user mailing listSwift-user at ci.uchicago.eduhttps://
> lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user
> > >>>>
> > >>>>
> > >>>>
> > >>>> --
> > >>>> Justin M Wozniak
> > >>>>
> > >>>>
> > >>>> _______________________________________________
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> > >>>>
> > >>>
> > >>>
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> > >>>
> > >>
> > >>
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> > >
> > >
> > >
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> > >
> > >
> > > --
> > > Justin M Wozniak
> > >
> > >
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