<div dir="ltr">Filed bug 1199 for Cobalt: <a href="https://bugzilla.mcs.anl.gov/swift/show_bug.cgi?id=1199">https://bugzilla.mcs.anl.gov/swift/show_bug.cgi?id=1199</a></div><div class="gmail_extra"><br><br><div class="gmail_quote">
On Tue, Feb 11, 2014 at 4:21 PM, Mihael Hategan <span dir="ltr"><<a href="mailto:hategan@mcs.anl.gov" target="_blank">hategan@mcs.anl.gov</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div class="">That's for PBS which is only marginally related to the Cobalt provider.<br>
<br>
Mihael<br>
<br>
On Tue, 2014-02-11 at 12:35 -0600, Ketan Maheshwari wrote:<br>
</div><div><div class="h5">> There is bug 1185 filed already:<br>
> <a href="https://bugzilla.mcs.anl.gov/swift/show_bug.cgi?id=1185" target="_blank">https://bugzilla.mcs.anl.gov/swift/show_bug.cgi?id=1185</a><br>
><br>
><br>
> On Tue, Feb 11, 2014 at 11:23 AM, Justin M Wozniak <<a href="mailto:wozniak@mcs.anl.gov">wozniak@mcs.anl.gov</a>>wrote:<br>
><br>
> ><br>
> > Let's add a bugzilla entry to make sure this error is reported clearly.<br>
> ><br>
> > On 02/11/2014 11:12 AM, Ketan Maheshwari wrote:<br>
> ><br>
> > This was fixed after changing the default project from the expired atpesc<br>
> > to ExM.<br>
> ><br>
> > Thanks!<br>
> ><br>
> ><br>
> > On Tue, Feb 11, 2014 at 10:51 AM, David Kelly <<a href="mailto:davidkelly@uchicago.edu">davidkelly@uchicago.edu</a>>wrote:<br>
> ><br>
> >> The Cobalt provider submits jobs via the command line rather than a<br>
> >> submit script, so I believe empty submit scripts are normal. >From the log<br>
> >> it looks like jobs are getting submitted and getting a job number. Are you<br>
> >> running from a filesystem that is shared on worker nodes?<br>
> >><br>
> >><br>
> >> On Tue, Feb 11, 2014 at 10:12 AM, Ketan Maheshwari <<a href="mailto:ketan@mcs.anl.gov">ketan@mcs.anl.gov</a>>wrote:<br>
> >><br>
> >>> Swift Tutorial scripts worked on Tukey as of last August during the<br>
> >>> ATPESC tutorials.<br>
> >>><br>
> >>> I find that empty Cobalt submit script files are created.<br>
> >>><br>
> >>><br>
> >>> On Tue, Feb 11, 2014 at 9:27 AM, Justin M Wozniak <<a href="mailto:wozniak@mcs.anl.gov">wozniak@mcs.anl.gov</a>>wrote:<br>
> >>><br>
> >>>><br>
> >>>> Has anyone else run successfully on Tukey?<br>
> >>>><br>
> >>>> Can you inspect/post the Swift-generated Cobalt submit script? You may<br>
> >>>> also want to inspect/post the Cobalt-generated<br>
> >>>> *.submit.stdout/*.submit.stderr logs.<br>
> >>>><br>
> >>>> On 02/10/2014 08:23 PM, Ketan Maheshwari wrote:<br>
> >>>><br>
> >>>> Hi,<br>
> >>>><br>
> >>>> Trying some Swift test for Swift-Galaxy demo on Tukey. Using<br>
> >>>> local:cobalt coaster provider. I am getting the following error:<br>
> >>>><br>
> >>>> $ swift -sites.file sites.xml -tc.file tc -config cf script.swift<br>
> >>>> Swift 0.94 swift-r6637 cog-r3742<br>
> >>>><br>
> >>>> RunID: 20140211-0216-ryo7slj7<br>
> >>>> Progress: time: Tue, 11 Feb 2014 02:16:53 +0000<br>
> >>>> Progress: time: Tue, 11 Feb 2014 02:17:23 +0000 Submitted:3<br>
> >>>> Progress: time: Tue, 11 Feb 2014 02:17:53 +0000 Submitted:3<br>
> >>>> Progress: time: Tue, 11 Feb 2014 02:17:58 +0000 Submitted:2 Active:1<br>
> >>>> Execution failed:<br>
> >>>> Exception in sh:<br>
> >>>> Arguments:<br>
> >>>> [gpfs/mira-home/ketan/galaxy-dist/database/files/000/dataset_1.dat, 0]<br>
> >>>> Host: tukey<br>
> >>>> Directory: script-20140211-0216-ryo7slj7/jobs/u/sh-uv25u9ml<br>
> >>>> Caused by:<br>
> >>>> Block task failed:<br>
> >>>><br>
> >>>><br>
> >>>> anapp, script.swift, line 13<br>
> >>>><br>
> >>>> Tried many different options in swift.properties to no avail.<br>
> >>>><br>
> >>>> Also tried the ATPESC 2013 tutorial setup but scripts fail with same<br>
> >>>> pattern/error messages.<br>
> >>>><br>
> >>>> Attaching the tarball with config, sites file.<br>
> >>>><br>
> >>>> Thanks for any suggestions.<br>
> >>>><br>
> >>>> Ketan<br>
> >>>><br>
> >>>><br>
> >>>> _______________________________________________<br>
</div></div>> >>>> Swift-user mailing listSwift-user@ci.uchicago.eduhttps://<a href="http://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user" target="_blank">lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user</a><br>
<div class="">> >>>><br>
> >>>><br>
> >>>><br>
> >>>> --<br>
> >>>> Justin M Wozniak<br>
> >>>><br>
> >>>><br>
> >>>> _______________________________________________<br>
> >>>> Swift-user mailing list<br>
> >>>> <a href="mailto:Swift-user@ci.uchicago.edu">Swift-user@ci.uchicago.edu</a><br>
> >>>> <a href="https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user" target="_blank">https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user</a><br>
> >>>><br>
> >>><br>
> >>><br>
> >>> _______________________________________________<br>
> >>> Swift-user mailing list<br>
> >>> <a href="mailto:Swift-user@ci.uchicago.edu">Swift-user@ci.uchicago.edu</a><br>
> >>> <a href="https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user" target="_blank">https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user</a><br>
> >>><br>
> >><br>
> >><br>
> >> _______________________________________________<br>
> >> Swift-user mailing list<br>
> >> <a href="mailto:Swift-user@ci.uchicago.edu">Swift-user@ci.uchicago.edu</a><br>
> >> <a href="https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user" target="_blank">https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user</a><br>
> >><br>
> ><br>
> ><br>
> ><br>
> > _______________________________________________<br>
</div>> > Swift-user mailing listSwift-user@ci.uchicago.eduhttps://<a href="http://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user" target="_blank">lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user</a><br>
<div class="HOEnZb"><div class="h5">> ><br>
> ><br>
> ><br>
> > --<br>
> > Justin M Wozniak<br>
> ><br>
> ><br>
> > _______________________________________________<br>
> > Swift-user mailing list<br>
> > <a href="mailto:Swift-user@ci.uchicago.edu">Swift-user@ci.uchicago.edu</a><br>
> > <a href="https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user" target="_blank">https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user</a><br>
> ><br>
> _______________________________________________<br>
> Swift-user mailing list<br>
> <a href="mailto:Swift-user@ci.uchicago.edu">Swift-user@ci.uchicago.edu</a><br>
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</div></div></blockquote></div><br></div>