[Swift-user] Block task failed on Tukey/Cobalt

Ketan Maheshwari ketan at mcs.anl.gov
Tue Feb 11 10:12:16 CST 2014


Swift Tutorial scripts worked on Tukey as of last August during the ATPESC
tutorials.

I find that empty Cobalt submit script files are created.


On Tue, Feb 11, 2014 at 9:27 AM, Justin M Wozniak <wozniak at mcs.anl.gov>wrote:

>
> Has anyone else run successfully on Tukey?
>
> Can you inspect/post the Swift-generated Cobalt submit script? You may
> also want to inspect/post the Cobalt-generated
> *.submit.stdout/*.submit.stderr logs.
>
> On 02/10/2014 08:23 PM, Ketan Maheshwari wrote:
>
> Hi,
>
>  Trying some Swift test for Swift-Galaxy demo on Tukey. Using
> local:cobalt coaster provider. I am getting the following error:
>
>  $ swift -sites.file sites.xml -tc.file tc -config cf script.swift
> Swift 0.94 swift-r6637 cog-r3742
>
>  RunID: 20140211-0216-ryo7slj7
> Progress:  time: Tue, 11 Feb 2014 02:16:53 +0000
> Progress:  time: Tue, 11 Feb 2014 02:17:23 +0000  Submitted:3
> Progress:  time: Tue, 11 Feb 2014 02:17:53 +0000  Submitted:3
> Progress:  time: Tue, 11 Feb 2014 02:17:58 +0000  Submitted:2  Active:1
> Execution failed:
>  Exception in sh:
>     Arguments:
> [gpfs/mira-home/ketan/galaxy-dist/database/files/000/dataset_1.dat, 0]
>     Host: tukey
>     Directory: script-20140211-0216-ryo7slj7/jobs/u/sh-uv25u9ml
> Caused by:
>  Block task failed:
>
>
>  anapp, script.swift, line 13
>
>  Tried many different options in swift.properties to no avail.
>
>  Also tried the ATPESC 2013 tutorial setup but scripts fail with same
> pattern/error messages.
>
>  Attaching the tarball with config, sites file.
>
>  Thanks for any suggestions.
>
>  Ketan
>
>
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>
>
>
> --
> Justin M Wozniak
>
>
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