[Swift-user] queue problem?

[Justin M Wozniak]

That's probably a perms thing, I just reapplied the permissions, please 
try again.

On Mon, 16 May 2011, Sheri Mickelson wrote:

> Hi Justin,
>
> I'm getting this error when swift tries to run:
>
> Exception in thread "main" java.lang.NoClassDefFoundError: 
> org/griphyn/vdl/karajan/Loader
> Caused by: java.lang.ClassNotFoundException: org.griphyn.vdl.karajan.Loader
> 	at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
> 	at java.security.AccessController.doPrivileged(Native Method)
> 	at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
> 	at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
> 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
> 	at java.lang.ClassLoader.loadClass(ClassLoader.java:248)
> Could not find the main class: org.griphyn.vdl.karajan.Loader.  Program will 
> exit.
>
> -Sheri
>
> Justin M Wozniak wrote:
>> 
>> Let's go with my trunk-based installation in the location below for now. I 
>> tried testing this again over the weekend but did not get through the 
>> queue.  I have already set up the additional logging in this installation.
>> 
>> /homes/wozniak/Public/cog/modules/swift/dist/swift-svn/bin/swift
>>
>>     Justin
>> 
>> On Fri, 13 May 2011, Sheri Mickelson wrote:
>> 
>>> Here's the log file.
>>> This is the first time I'm running this version of swift on fusion.  I had 
>>> done my development work with this swift version on an mcs compute 
>>> machine.
>>> 
>>> -Sheri
>>> 
>>> Justin M Wozniak wrote:
>>>> Hello
>>>>     Can you send the log for this run?
>>>>     Is this a new issue that appeared after an update?
>>>>     Also, in any future runs regarding this issue, please add
>>>> 
>>>> log4j.logger.org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor 
>>>> = DEBUG
>>>> 
>>>> (one line) to your etc/log4j.properties file.
>>>>
>>>>     Thanks
>>>>     Justin
>>>> 
>>>> On Fri, 13 May 2011, Sheri Mickelson wrote:
>>>> 
>>>>> I'm running into a problem running swift version 0.92.1 on fusion with 
>>>>> coasters.
>>>>> This is the error I'm seeing:
>>>>> 
>>>>>
>>>>> 
>>>>> ----------------------------------------------------------------------------- 
>>>>> Progress:  Selecting site:168  Submitted:23  Active:2
>>>>> Progress:  Selecting site:168  Submitted:23  Active:1  Checking status:1
>>>>> Progress:  Selecting site:167  Stage in:1  Submitted:22  Active:2 
>>>>> Finished successfully:1
>>>>> queuedsize > 0 but no job dequeued. Queued: {}
>>>>> java.lang.Throwable
>>>>>     at 
>>>>> org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.requeueNonFitting(BlockQueueProcessor.java:252)
>>>>>     at 
>>>>> org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.updatePlan(BlockQueueProcessor.java:520)
>>>>>     at 
>>>>> org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.run(BlockQueueProcessor.java:109) 
>>>>> queuedsize > 0 but no job dequeued. Queued: {}
>>>>> java.lang.Throwable
>>>>>     at 
>>>>> org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.requeueNonFitting(BlockQueueProcessor.java:252)
>>>>>     at 
>>>>> org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.updatePlan(BlockQueueProcessor.java:520)
>>>>>     at 
>>>>> org.globus.cog.abstraction.coaster.service.job.manager.BlockQueueProcessor.run(BlockQueueProcessor.java:109) 
>>>>> Shutting down worker
>>>>> 
>>>>> Shutting down worker
>>>>> 
>>>>> Shutting down worker
>>>>>
>>>>> 
>>>>> ----------------------------------------------------------------------------- 
>>>>> And here's my sites file:
>>>>> 
>>>>>
>>>>> 
>>>>> ----------------------------------------------------------------------------- 
>>>>> <config>
>>>>> <pool handle="fusion">
>>>>>  <execution jobmanager="local:pbs" provider="coaster" url="none"/>
>>>>>  <profile namespace="globus" key="maxtime">3600</profile>
>>>>>  <profile namespace="globus" key="workersPerNode">1</profile>
>>>>>  <profile namespace="globus" key="slots">1</profile>
>>>>>  <profile namespace="globus"  key="nodeGranularity">4</profile>
>>>>>  <profile namespace="globus" key="maxNodes">2</profile>
>>>>>  <profile namespace="globus" key="queue">batch</profile>
>>>>>  <profile namespace="karajan" key="jobThrottle">0.23</profile>
>>>>>  <profile namespace="karajan" key="initialScore">10000</profile>
>>>>>  <profile namespace="globus" key="project">parvis</profile>
>>>>>  <profile namespace="globus"  key="lowOverAllocation">100</profile>
>>>>>  <profile namespace="globus"  key="highOverAllocation">100</profile>
>>>>>  <filesystem provider="local"/>
>>>>>  <workdirectory>/fusion/gpfs/home/mickelso/amwg-swift/swift/</workdirectory> 
>>>>> </pool>
>>>>> </config>
>>>>>
>>>>> 
>>>>> ----------------------------------------------------------------------------- 
>>>>> Do you know what might be causing this?
>>>>> 
>>>>> Thanks, Sheri
>>>>> _______________________________________________
>>>>> Swift-user mailing list
>>>>> Swift-user at ci.uchicago.edu
>>>>> http://mail.ci.uchicago.edu/mailman/listinfo/swift-user
>>>>> 
>>>> 
>>> 
>> 
>

-- 
Justin M Wozniak