[Swift-user] mixing gram execution and local filesystem providers

Allan Espinosa aespinosa at cs.uchicago.edu
Tue Feb 3 17:57:38 CST 2009


This is weird, I was successful in submitting over 250 jobs but then
got the errors again after a while:
log:
http://www.ci.uchicago.edu/~aespinosa/swift/blast-20090203-1709-8dc38njb.log

...
Progress:  Selecting site:377 Active:1 Finished successfully:253
Failed but can retry:69
Failed to transfer wrapper log from
blast-20090203-1709-8dc38njb/info/r on TERAPORT
Progress:  Selecting site:377 Finished successfully:253 Failed but can retry:70
Progress:  Selecting site:377 Finished successfully:253 Failed but can retry:70
Progress:  Selecting site:377 Finished successfully:253 Failed but can retry:70
Progress:  Selecting site:376 Stage in:1 Finished successfully:253
Failed but can retry:70
Progress:  Selecting site:376 Active:1 Finished successfully:253
Failed but can retry:70
Failed to transfer wrapper log from
blast-20090203-1709-8dc38njb/info/t on TERAPORT

sites.xml:
  <pool handle="TERAPORT" sysinfo="INTEL32::LINUX">
    <profile namespace="globus" key="queue">fast</profile>
    <profile namespace="globus"
key="coasterWorkerMaxwalltime">00:30:00</profile>
    <gridftp url="local://localhost" />
    <execution provider="coaster" url="tp-grid1.uchicago.edu"
jobmanager="gt2:gt2:pbs" />
    <workdirectory >/disks/tp-gpfs/scratch/aespinosa</workdirectory>
  </pool>

Does this mean that the "cp" calls fail after a while?

-Allan

On Tue, Feb 3, 2009 at 12:20 PM, Allan Espinosa
<aespinosa at cs.uchicago.edu> wrote:
> Hi mike
> yes it gives a different java environment (but the same for both
> submission hosts communicado and tp-login1:
> globus-job-run tp-grid1.ci.uchicago.edu /bin/bash -l -c "which java"
> SoftEnv 1.6.0: updating your software environment, one moment...
> /autonfs/software/linux-rhel4-x86_64/osg-client-1.0.0-r1/jdk1.5/bin/java



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