[Swift-user] Exception in getFile

[Mihael Hategan]

Not much we can do if the filesystem is broken.
Did you check to confirm that the file is not there?

Mihael

On Mon, 2007-08-20 at 12:07 -0500, Jing Tie wrote:
> Hi,
> 
> Here is another problem. It seems like something wrong with GFS
> system.
> 
> site: MIT_CMS
> gatekeeper: ce01.cmsaf.mit.edu
> app_dir: /osg/app
> data_dir: /osg/data
> condor_dir: /usr/local/condor/bin
> R_dir: /osg/app/R-2.5.1/bin/R
> 
> output:
> Application exception: Exception in getFile 
>         task:transfer @ vdl-int.k, line: 235
>         vdl:dostageout @ vdl-int.k, line: 378
>         vdl:execute2 @ execute-default.k, line: 22
>         vdl:execute @ sid-wf1.kml, line: 20
>         wavelettransf @ sid-wf1.kml, line: 362
>         batchtrials @ sid-wf1.kml, line: 402
>         vdl:mains @ sid-wf1.kml, line: 399
> Caused by: org.globus.cog.abstraction.impl.file.FileResourceException:
> Exception in getFile
> Caused by: org.globus.ftp.exception.ServerException: Server refused
> performing the request. Custom message:  (error code 1)  cwtsmall
> failed
> Provenance graph saved in sid-wf1-7thy5mbfh09e1.dot
> The following errors have occurred: 
> 1. Application "cwtsmall" failed (Exception in getFile
> Caused by:
> Server refused performing the request. Custom message:  (error code
> 1) 
> [Nested exception message:  Nested exception is
> org.globus.ftp.exception.UnexpectedReplyCodeException :
> Custom message: Unexpected reply: 
> 500-Command failed. :
> globus_gridftp_server_file.c:globus_l_gfs_file_send:2190:
> 500-globus_l_gfs_file_open failed.
> 500-globus_gridftp_server_file.c:globus_l_gfs_file_open:1694: 
> 500-globus_xio_register_open failed.
> 500-globus_xio_file_driver.c:globus_l_xio_file_open:438:
> 500-Unable to open
> file /osgfs/data/sid-wf1-7thy5mbfh09e1/shared//101-FBchannel16_cwt-avgResults.Rdata
> 500-globus_xio_file_driver.c:globus_l_xio_file_open:381: 
> 500-System error in open: No such file or directory
> 500-globus_xio: A system call failed: No such file or directory
> 500 End.])
>         Arguments: "scripts/runWaveletsAvg.R, 101, FB"
>         Host: UCSDT2 
>         Directory: sid-wf1-7thy5mbfh09e1/cwtsmall-mb3l3rfi
>         STDERR: 
>         STDOUT:
> Errors detected. Cleanup not done.
> Execution completed with errors
>         sys:throw @ vdl.k, line: 140
>         vdl:mains @ sid-wf1.kml, line: 399
>         at
> org.globus.cog.karajan.workflow.nodes.FlowNode.fail(FlowNode.java:413)
>         at
> org.globus.cog.karajan.workflow.nodes.FlowNode.fail(FlowNode.java:417)
>         at
> org.globus.cog.karajan.workflow.nodes.GenerateErrorNode.post
> (GenerateErrorNode.java:28)
>         at
> org.globus.cog.karajan.workflow.nodes.AbstractSequentialWithArguments.childCompleted
>         at
> org.globus.cog.karajan.workflow.nodes.Sequential.notificationEvent(Sequential.java :33)
>         at
> org.globus.cog.karajan.workflow.nodes.FlowNode.event(FlowNode.java:334)
>         at
> org.globus.cog.karajan.workflow.events.EventBus.send(EventBus.java:123)
>         at org.globus.cog.karajan.workflow.events.EventBus.sendHooked
> (EventBus.java:97)
>         at
> org.globus.cog.karajan.workflow.nodes.FlowNode.fireNotificationEvent(FlowNode.java:172)
>         at
> org.globus.cog.karajan.workflow.nodes.FlowNode.complete(FlowNode.java:298)
>         at
> org.globus.cog.karajan.workflow.nodes.functions.AbstractFunction.executeChildren(AbstractFunction.java:37)
>         at
> org.globus.cog.karajan.workflow.nodes.FlowContainer.execute(FlowContainer.java:63)
>         at org.globus.cog.karajan.workflow.nodes.FlowNode.restart
> (FlowNode.java:239)
>         at
> org.globus.cog.karajan.workflow.nodes.FlowNode.start(FlowNode.java:280)
>         at
> org.globus.cog.karajan.workflow.nodes.FlowNode.controlEvent(FlowNode.java:392)
>         at org.globus.cog.karajan.workflow.nodes.FlowNode.event
> (FlowNode.java:331)
>         at
> org.globus.cog.karajan.workflow.FlowElementWrapper.event(FlowElementWrapper.java:227)
>         at
> org.globus.cog.karajan.workflow.events.EventBus.send(EventBus.java:123)
>         at org.globus.cog.karajan.workflow.events.EventBus.sendHooked
> (EventBus.java:97)
>         at
> org.globus.cog.karajan.workflow.events.EventWorker.run(EventWorker.java:69)
> 
> Many thanks,
> Jing
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