[Swift-devel] exit code 254, manual passive coasters on bionimbus cloud

[Ketan Maheshwari]

Hi,

I am trying the modftdock application on the Bionimbus cloud with the following manual coasters setup:

- A Manual coaster service is running on a cloud head node:

coaster-service -nosec
Local contacts: [http://10.101.13.200:53513, http://10.101.12.200:53513, http://10.101.9.200:53513, http://10.101.11.200:53513, http://10.101.10.200:53513, http://10.101.8.200:53513, http://10.101.7.200:53513, http://10.101.6.200:53513, http://10.101.5.200:53513, http://172.31.0.36:53513, http://131.193.181.210:53513]
Started local service: http://131.193.181.210:53513
Started coaster service: http://131.193.181.210:1984
Started coaster service: http://131.193.181.210:1984


- Swift on the same above mentioned cloud head node
Here is my commandline:

swift -config cf -tc.file tc -sites.file  bionimbus-coaster-with-provider-staging.xml ftdock.swift -n=1 -list=pdb.list.1 -grid=10

worker.pl is running on one VM accessible via ssh

Swift Provider staging enabled as staging has to be done from a non-shared filesystem.

-- I tested a simple catsn example on this setup and it works so the setup seems fine.

However on running the modftdock I get the following 254 message:

Swift svn swift-r4157 cog-r3056

RunID: 20110408-2235-en2fi70c
Progress:
SwiftScript trace: 3bg0-1
Find: http://localhost:1984
Find:  keepalive(120), reconnect - http://localhost:1984
Progress:  Active:1
Exception in modftdock:
Arguments: [32, -modulo, 0:100, -root, 3bg0-1, -static, input/3bg0-1.pdb, -mobile, input/4TRA.pdb, -calculate_grid, 10, -angle_step, 10, -keep, 10, -noelec]
Host: localhost
Directory: ftdock-20110408-2235-en2fi70c/jobs/i/modftdock-idyrqf8kTODO: outs
----

Caused by: Job failed with an exit code of 254
Caused by: org.globus.cog.abstraction.impl.common.execution.JobException: Job failed with an exit code of 254
Final status:  Failed:1
The following errors have occurred:
1. Job failed with an exit code of 254

I did some find + grep and 
** I found the string "TODO: outs" on my SWIFT_HOME/libexec/vdl-int-staging.k

In addition, I noticed that workdirectory was not created in my directory.


Attached are the cf, tc, bionimbus...xml files

Also attached is the log for this run.

Thanks for any clues on this.

Regards,
Ketan
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