[Swift-devel] coasters and java on queen bee

[Sarah Kenny]

pre-pending the path via .bashrc,tc.data or sites.xml seems to have no
effect...i was under the impression that others were successfully
running coasters on queen bee, so thought someone might've dealt with
this already...but perhaps i should try poking the loni admins to see
if they can shed some light.

thanks
~sk

On Tue, Jun 29, 2010 at 10:39 AM, Michael Wilde <wilde at mcs.anl.gov> wrote:
> It seems like some interaction between coaster bootstrap, softenv (or lack thereof) and site conventions is causing gcj to be used. That seems to be in your PATH and you can try to explicitly put the correct JAVA in your PATH in .bashrc and/or .profile. Setting JAVA_HOME alone wont cause the correct Java to be run.
>
> - Mike
>
> ----- "Sarah Kenny" <skenny at uchicago.edu> wrote:
>
>> nope :(
>>
>> On Mon, Jun 28, 2010 at 2:40 PM, Mihael Hategan <hategan at mcs.anl.gov>
>> wrote:
>> > Ok. That might not work either.
>> >
>> > However, you may try to add the proper java executable to the PATH.
>> I
>> > think that might work better.
>> >
>> > On Mon, 2010-06-28 at 14:34 -0500, Sarah Kenny wrote:
>> >> tc.data had no effect...will try sites
>> >>
>> >> On Mon, Jun 28, 2010 at 2:30 PM, Mihael Hategan
>> <hategan at mcs.anl.gov> wrote:
>> >> > Have you tried setting JAVA_HOME in tc.data or sites.xml? I have
>> a
>> >> > suspicion that might work.
>> >> >
>> >> > On Mon, 2010-06-28 at 14:11 -0500, Sarah Kenny wrote:
>> >> >> anyone else get this using coasters on queen bee?
>> >> >>
>> >> >> STDOUT: Warning: -jar not understood. Ignoring.
>> >> >> Exception in thread "main" java.lang.NoClassDefFoundError:
>> .tmp.bootstrap.Z29712
>> >> >>    at gnu.gcj.runtime.FirstThread.run()
>> (/usr/lib64/libgcj.so.5.0.0)
>> >> >>    at _Jv_ThreadRun(java.lang.Thread)
>> (/usr/lib64/libgcj.so.5.0.0)
>> >> >>    at _Jv_RunMain(java.lang.Class, byte const, int, byte const,
>> >> >> boolean) (/usr/lib64/libgcj.so.5.0.0)
>> >> >>    at __gcj_personality_v0 (/home/skenny/java.version=1.4.2)
>> >> >>    at __libc_start_main (/lib64/tls/libc-2.3.4.so)
>> >> >>    at _Jv_RegisterClasses (/home/skenny/java.version=1.4.2)
>> >> >>
>> >> >> not sure why it's showing my java version as 1.4.2...when i'm
>> logged
>> >> >> into the headnode (or a worker node) my java version is much
>> newer:
>> >> >>
>> >> >> [skenny at qb1 ~]$ java -version
>> >> >> java version "1.6.0_20"
>> >> >> Java(TM) SE Runtime Environment (build 1.6.0_20-b02)
>> >> >> Java HotSpot(TM) 64-Bit Server VM (build 16.3-b01, mixed mode)
>> >> >>
>> >> >> i also tried adding JAVA_HOME to my .bashrc on the site which
>> had no effect.
>> >> >>
>> >> >> any idea how i can get swift to use the right java?
>> >> >>
>> >> >> using a slightly older swift (swift-r3116 cog-r2482)...don't
>> know if
>> >> >> this has maybe been fixed in a later version (?)
>> >> >>
>> >> >>
>> >> >> thanks
>> >> >> ~sk
>> >> >> _______________________________________________
>> >> >> Swift-devel mailing list
>> >> >> Swift-devel at ci.uchicago.edu
>> >> >> http://mail.ci.uchicago.edu/mailman/listinfo/swift-devel
>> >> >
>> >> >
>> >> >
>> >
>> >
>> >
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>
> --
> Michael Wilde
> Computation Institute, University of Chicago
> Mathematics and Computer Science Division
> Argonne National Laboratory
>
>