[Swift-devel] swift not working

[Ben Clifford]

Please can you send the sites.xml files for the below two sites. They both 
look like network errors of some kind.

On Tue, 21 Apr 2009, Michael Andric wrote:

> Normally, I would hit up Sarah for a fix on this, but since she's on
> vacation I'm hoping someone else out there could help with this.  I'm unable
> to get swift jobs submitted.  I've tried submitting to both the ucanl64 and
> bsd clusters.  The run dir (with log files) is here:
> /disks/ci-gpfs/fmri/cnari/swift/projects/andric/SNR/RFL2
> 
> 
> Here's what I get from ucanl:
> 
> [...]Progress:  Submitting:1  Submitted:1 Failed but can retry:1
> Failed to transfer wrapper log from AFNIsnr-20090421-0930-q403bn99/info/e on
> ANLUCTERAGRID64
> Progress:  Submitting:1 Failed but can retry:2
> Progress:  Submitting:1 Failed but can retry:2
> Progress:  Submitting:1 Failed but can retry:2
> Progress:  Stage in:1  Submitting:1 Failed but can retry:1
> Progress:  Submitting:2 Failed but can retry:1
> Progress:  Submitting:1  Submitted:1 Failed but can retry:1
> Failed to transfer wrapper log from AFNIsnr-20090421-0930-q403bn99/info/g on
> ANLUCTERAGRID64
> Progress:  Submitting:1  Failed:1 Failed but can retry:1
> Execution failed:
>         Exception in AFNI_3dvolreg:
> Arguments: [-twopass, -twodup, -dfile, mot_RFL2.run6_trim, -base,
> ts.6_trim+orig[92], -prefix, volreg.RFL2.run6_trim, ts.6_trim+orig.BRIK]
> Host: ANLUCTERAGRID64
> Directory: AFNIsnr-20090421-0930-q403bn99/jobs/g/AFNI_3dvolreg-gxefdp9j
> stderr.txt:
> 
> stdout.txt:
> 
> ----
> 
> Caused by:
>         Cannot submit job: ; nested exception is:
>         java.net.SocketTimeoutException: Read timed out
> gwynn 5%
> 
> 
> 
> and this is what I get on bsd:
> 
> RunID: 20090421-0943-o1bb0081
> Progress:
> Progress:  Selecting site:1  Initializing site shared directory:1  Stage
> in:1
> Progress:  Stage in:2  Submitting:1
> 2009.04.21 09:44:04.848 CDT: [ERROR] Parsing profiles on line 1800 Illegal
> character ':'at position 60 :Illegal character ':'
> Progress:  Submitted:1 Failed but can retry:2
> Failed to transfer wrapper log from AFNIsnr-20090421-0943-o1bb0081/info/f on
> BSD
> Failed to transfer wrapper log from AFNIsnr-20090421-0943-o1bb0081/info/g on
> BSD
> Failed to transfer wrapper log from AFNIsnr-20090421-0943-o1bb0081/info/e on
> BSD
> Failed to transfer wrapper log from AFNIsnr-20090421-0943-o1bb0081/info/i on
> BSD
> Progress: Failed but can retry:3
> Progress:  Stage in:1 Failed but can retry:2
> Failed to transfer wrapper log from AFNIsnr-20090421-0943-o1bb0081/info/m on
> BSD
> Progress: Failed but can retry:3
> Progress: Failed but can retry:3
> Progress: Failed but can retry:3
> Progress:  Stage in:1 Failed but can retry:2
> Failed to transfer wrapper log from AFNIsnr-20090421-0943-o1bb0081/info/o on
> BSD
> Progress: Failed but can retry:3
> Progress: Failed but can retry:3
> Progress: Failed but can retry:3
> Progress: Failed but can retry:3
> Progress:  Stage in:1 Failed but can retry:2
> Failed to transfer wrapper log from AFNIsnr-20090421-0943-o1bb0081/info/q on
> BSD
> Progress:  Failed:1 Failed but can retry:2
> Execution failed:
>         Exception in AFNI_3dvolreg:
> Arguments: [-twopass, -twodup, -dfile, mot_RFL2.run5_trim, -base,
> ts.5_trim+orig[92], -prefix, volreg.RFL2.run5_trim, ts.5_trim+orig.BRIK]
> Host: BSD
> Directory: AFNIsnr-20090421-0943-o1bb0081/jobs/q/AFNI_3dvolreg-q0rydp9j
> stderr.txt:
> 
> stdout.txt:
> 
> ----
> 
> Caused by:
>         Cannot submit job
> Caused by:
>         Data transfer to the server failed [Caused by: Token length
> 1248813600 > 33554432]
>