[Swift-devel] Re: latest attempt with GRAM4

joseph insley insley at mcs.anl.gov
Tue Feb 12 14:45:29 CST 2008


Mike K,

looks like you have the wrong value in your .tg_default_project file:

insley at tg-viz-login1:~> more ~kubal/.tg_default_project
TG-MCA01S018

you should be using: TG-MCB010025N

insley at tg-viz-login1:~> tgusage -i -u kubal

[snip]

Account: TG-MCA01S018
Title: Computational Studies of Complex Processes in Biological  
Macromolecular Systems
Resource: teragrid

****
Local project name on dtf.anl.teragrid is TG-MCB010025N
****

Allocation Period: 2007-08-03 to 2008-03-31

Name (Last First) or Account       Total      Remaining        Usage
----------------------------     ----------  ------------   ----------
    Kubal  Michael                101880 SU     99358 SU       296 SU
----------------------------------------------------------------------
    TG-MCA01S018                  101880 SU     99358 SU      2522 SU



On Feb 12, 2008, at 2:37 PM, Mihael Hategan wrote:

> You should probably remove the line completely.
>
> Did you chose a default project on the login node with tgprojects?
>
> On Tue, 2008-02-12 at 12:34 -0800, Mike Kubal wrote:
>> I tried running with the account id removed from the
>> sites.file as in the following line:
>>
>> <profile namespace="globus" key=""></profile>
>>
>> but received the same error.
>>
>>
>>
>> --- Mihael Hategan <hategan at mcs.anl.gov> wrote:
>>
>>> Is this the same for pre-WS GRAM?
>>>
>>> On Tue, 2008-02-12 at 14:20 -0600, Stuart Martin
>>> wrote:
>>>> that's right, qsub is used for PBS (and some
>>> others too)
>>>> bsub is LSF
>>>> condor_q for condor
>>>> ...
>>>>
>>>> -Stu
>>>>
>>>> On Feb 12, 2008, at Feb 12, 2:15 PM, Mihael
>>> Hategan wrote:
>>>>
>>>>>
>>>>> On Tue, 2008-02-12 at 12:09 -0800, Mike Kubal
>>> wrote:
>>>>>> I'll give it a try.
>>>>>>
>>>>>> When using GRAM4, is qsub the method used to
>>>>>> ultimately put the job in the queue?
>>>>>
>>>>> Looks like it. I also believe it's the case with
>>> pre-ws gram. Stu
>>>>> may be
>>>>> able to clarify.
>>>>>
>>>>>>
>>>>>> MikeK
>>>>>> --- Mihael Hategan <hategan at mcs.anl.gov> wrote:
>>>>>>
>>>>>>> While this doesn't solve the underlying
>>> problem, it
>>>>>>> may help you get
>>>>>>> this to work: log into tg-login1.uc..., set
>>> this
>>>>>>> project as default,
>>>>>>> then remove the project spec from the sites
>>> file and
>>>>>>> try again.
>>>>>>>
>>>>>>> Mihael
>>>>>>>
>>>>>>> On Tue, 2008-02-12 at 11:36 -0800, Mike Kubal
>>> wrote:
>>>>>>>> Yes, I believe you are right. The kickstart
>>>>>>> message
>>>>>>>> may be only a warning. After digging a little
>>>>>>> deeper
>>>>>>>> it appears the job is failing due to a
>>>>>>> project/account
>>>>>>>> id problem. I get the following error:
>>>>>>>>
>>>>>>>> Caused by:
>>>>>>>>        The executable could not be started.,
>>>>>>> qsub:
>>>>>>>> Invalid Account MSG=invalid account
>>>>>>>>
>>>>>>>> I am specifying the same TG-account in my
>>>>>>> site-file
>>>>>>>> for the gram4 run that fails, as in the
>>> site-file
>>>>>>> for
>>>>>>>> the pre-ws job that suceeds. This is the same
>>>>>>> project,
>>>>>>>> TG-MCA01S018, that is set in my
>>>>>>> .tg_default_project
>>>>>>>> file in ~kubal/ on the UC teragrid.
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>> --- Ben Clifford <benc at hawaga.org.uk> wrote:
>>>>>>>>
>>>>>>>>> yeah, run that same without kickstart. the
>>> error
>>>>>>>>> reported is that
>>>>>>>>> kickstart didn't work right - but there's
>>>>>>> perhaps
>>>>>>>>> some underlying error.
>>>>>>>>> -- 
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>
>>>
>> _____________________________________________________________________ 
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>>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>
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>>>
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>

===================================================
joseph a. insley                                                       
insley at mcs.anl.gov
mathematics & computer science division       (630) 252-5649
argonne national laboratory                               (630)  
252-5986 (fax)


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