[Swift-commit] r8366 - SwiftApps/ematter/galaxy

[ketan at ci.uchicago.edu]

Author: ketan
Date: 2015-01-20 10:34:53 -0600 (Tue, 20 Jan 2015)
New Revision: 8366

Removed:
   SwiftApps/ematter/galaxy/lastlammpsdump2xyz.py
Modified:
   SwiftApps/ematter/galaxy/workflow.full.swift
Log:
remove dup

Deleted: SwiftApps/ematter/galaxy/lastlammpsdump2xyz.py
===================================================================
--- SwiftApps/ematter/galaxy/lastlammpsdump2xyz.py	2015-01-20 15:13:56 UTC (rev 8365)
+++ SwiftApps/ematter/galaxy/lastlammpsdump2xyz.py	2015-01-20 16:34:53 UTC (rev 8366)
@@ -1,22 +0,0 @@
-#!/usr/bin/env python
-
-# Set the import path to find the Pizza tools.
-# Warning! Nonportable.
-
-import sys
-sys.path.append('/home/ketan/pizza-2Jul14/src')
-import dump, xyz
-
-if __name__ == '__main__':
-	# read the dump file (the first cl arg)
-	d = dump.dump(sys.argv[1])
-	# Get array of times
-	t = d.time()
-	# Convert the list of dumped states to xyz (in memory)
-	x = xyz.xyz(d)
-	# Dump just the last time instance to a file (the second cl arg)
-	# This can be easily changed to use any other time slice between 0 
-	# and len(t)-1 inclusive.  This will require additional validation
-	# of the additional input parameter, though.
-	x.single(t[-1],sys.argv[2])	
-

Modified: SwiftApps/ematter/galaxy/workflow.full.swift
===================================================================
--- SwiftApps/ematter/galaxy/workflow.full.swift	2015-01-20 15:13:56 UTC (rev 8365)
+++ SwiftApps/ematter/galaxy/workflow.full.swift	2015-01-20 16:34:53 UTC (rev 8366)
@@ -48,6 +48,7 @@
    mpiexec "/home/heinonen/smeagol-1.2-Feb-2014/smeagol-1.2_blues/Src/smeagol-1.2_csg" stdin=@_inputfdf stdout=@_out; 
 }
 
+
 /* == 
 smeagol transport V0 inputs
 Au3.DM Au3.HST Au.psf
@@ -188,8 +189,6 @@
                                             fdf_proc_vn, opsf,
                                             osicpsf, tipsf,
                                             tisicpsf);
-
-
 }