[petsc-users] Compiling 3.21.5 version on a Grace Hopper node failed

Qiyue Lu qiyuelu1 at gmail.com
Fri Sep 20 14:22:14 CDT 2024


Sure, here it is. Thanks.

On Fri, Sep 20, 2024 at 2:07 PM Junchao Zhang <junchao.zhang at gmail.com>
wrote:

> Could you send the configure.log file?
> --Junchao Zhang
>
>
> On Fri, Sep 20, 2024 at 1:33 PM Qiyue Lu <qiyuelu1 at gmail.com> wrote:
>
>> Thanks for your response.
>> Here is my module loaded:
>>
>>
>>
>> *Currently Loaded Modules:  1) craype-arm-grace     4)
>> perftools-base/24.03.0                 7) craype/2.7.31      10)
>> cray-libsci/24.03.0     13) default  2) libfabric/1.15.2.0
>> <https://urldefense.us/v3/__http://1.15.2.0__;!!G_uCfscf7eWS!di5ROii4Qgz4qgyBROdUnJ1NBVTCNBStzEzi9Tt6bqLQiEbLgo7udOTPOSzIutj0Rqp6ULyZtTJNMqCQDU0bpw$ >   5) xpmem/2.8.4-1.0_7.1__ga37cbd9.shasta   8)
>> cray-dsmml/0.3.0   11) PrgEnv-gnu/8.5.0  3) craype-network-ofi   6)
>> gcc-native/13.2                        9) cray-mpich/8.1.29  12)
>> cudatoolkit/23.11_12.3*
>> And here is the configuration option now:
>>
>> *--with-cc=cc --with-cxx=CC --with-fc=ftn --download-f2cblaslapack=1
>> --with-cuda=1 *
>>
>> That error is still there.
>>
>> Best,
>> Qiyue Lu
>>
>> On Fri, Sep 20, 2024 at 11:58 AM Junchao Zhang <junchao.zhang at gmail.com>
>> wrote:
>>
>>> /u/qiyuelu1/petsc/src/vec/vec/impls/seq/cupm/cuda/../vecseqcupm_impl.hpp:1313:150:
>>> *internal compiler error*: in maybe_undo_parenthesized_ref, at
>>> cp/semantics.c:1740
>>>
>>> Did you use nvidia compilers, e.g. nvc, nvc++?  If yes, you may want to
>>> change to other compilers by loading other cray PrgEnvs
>>>
>>> --Junchao Zhang
>>>
>>>
>>> On Fri, Sep 20, 2024 at 11:42 AM Qiyue Lu <qiyuelu1 at gmail.com> wrote:
>>>
>>>> Hello,
>>>> I am trying to build the PETSc version 3.21.5 (the latest, cloned from
>>>> git) version on a Grace Hopper node with this configuration options:
>>>> *--with-cc=cc --with-cxx=CC --with-fc=ftn --download-f2cblaslapack=1
>>>> --with-cudac=nvcc --with-cuda=1 --with-threadsafety=1*
>>>> with module cudatoolkit/23.11_12.3.
>>>>
>>>> And I got this error:
>>>> ===============
>>>> /u/qiyuelu1/petsc/src/vec/vec/impls/seq/cupm/cuda/../vecseqcupm_impl.hpp:
>>>> In instantiation of ‘Petsc::vec::cupm::impl::VecSeq_CUPM<<anonymous>
>>>> >::SetAsync(Vec, PetscScalar, PetscDeviceContext)::<lambda()> [with
>>>> Petsc::device::cupm::DeviceType T = (Petsc::device::cupm::DeviceType)0]’:
>>>> /u/qiyuelu1/petsc/src/vec/vec/impls/seq/cupm/cuda/../vecseqcupm_impl.hpp:1313:157:
>>>>   required from ‘struct Petsc::vec::cupm::impl::VecSeq_CUPM<<anonymous>
>>>> >::SetAsync(Vec, PetscScalar, PetscDeviceContext) [with
>>>> Petsc::device::cupm::DeviceType T = (Petsc::device::cupm::DeviceType)0;
>>>> PetscErrorCode = int; Vec = _p_Vec*; PetscScalar = double;
>>>> PetscDeviceContext = _p_PetscDeviceContext*]::<lambda()>’
>>>> /u/qiyuelu1/petsc/src/vec/vec/impls/seq/cupm/cuda/../vecseqcupm_impl.hpp:1313:167:
>>>>   required from ‘static PetscErrorCode
>>>> Petsc::vec::cupm::impl::VecSeq_CUPM<<anonymous> >::SetAsync(Vec,
>>>> PetscScalar, PetscDeviceContext) [with Petsc::device::cupm::DeviceType T =
>>>> (Petsc::device::cupm::DeviceType)0; PetscErrorCode = int; Vec = _p_Vec*;
>>>> PetscScalar = double; PetscDeviceContext = _p_PetscDeviceContext*]’
>>>> /u/qiyuelu1/petsc/src/vec/vec/impls/seq/cupm/cuda/vecseqcupm.cu:7:40:
>>>>   required from here
>>>> /u/qiyuelu1/petsc/src/vec/vec/impls/seq/cupm/cuda/../vecseqcupm_impl.hpp:1313:150:
>>>> internal compiler error: in maybe_undo_parenthesized_ref, at
>>>> cp/semantics.c:1740
>>>>        PetscCallThrust(THRUST_CALL(thrust::fill, stream, dptr, dptr +
>>>> n, alpha));
>>>>
>>>> ===============
>>>>
>>>> Could you please show some hints on this issue?
>>>>
>>>> Thanks,
>>>> Qiyue Lu
>>>>
>>>
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