[petsc-users] make all check error

Satish Balay balay at mcs.anl.gov
Tue Oct 11 08:17:47 CDT 2022


Alternative: build/use mpich without hwloc. i.e:

--download-mpich=1 --with-hwloc=0

Satish

On Tue, 11 Oct 2022, Matthew Knepley wrote:

> On Tue, Oct 11, 2022 at 8:52 AM Barry Smith <bsmith at petsc.dev> wrote:
> 
> >
> >
> > https://petsc.org/release/faq/#what-does-the-message-hwloc-linux-ignoring-pci-device-with-non-16bit-domain-mean
> 
> 
> Ah. Obscure environment variables, not present in the error message, are
> always the best way to deal with this. Stay classy, hwloc!
> 
>    Matt
> 
> 
> >
> > > On Oct 10, 2022, at 11:54 PM, Sijie Zhang <zhan2355 at purdue.edu> wrote:
> > >
> > > Hi,
> > >
> > > When I try to install petsc on my PC and run the make all check commend
> > it has the following error. Can you help me to troubleshoot that?
> > >
> > > Thanks.
> > >
> > > Sijie
> > >
> > > ++++++++++++++++++++++++++++++++++++++++++++++++
> > > Running check examples to verify correct installation
> > > Using PETSC_DIR=/home/zhangsijie1995/Documents/Packages/petsc-3.18.0 and
> > PETSC_ARCH=arch-linux-c-debug
> > > Possible error running C/C++ src/snes/tutorials/ex19 with 1 MPI process
> > > See https://petsc.org/release/faq/
> > > hwloc/linux: Ignoring PCI device with non-16bit domain.
> > > Pass --enable-32bits-pci-domain to configure to support such devices
> > > (warning: it would break the library ABI, don't enable unless really
> > needed).
> > > lid velocity = 0.0016, prandtl # = 1., grashof # = 1.
> > > Number of SNES iterations = 2
> > > Possible error running C/C++ src/snes/tutorials/ex19 with 2 MPI processes
> > > See https://petsc.org/release/faq/
> > > hwloc/linux: Ignoring PCI device with non-16bit domain.
> > > Pass --enable-32bits-pci-domain to configure to support such devices
> > > (warning: it would break the library ABI, don't enable unless really
> > needed).
> > > hwloc/linux: Ignoring PCI device with non-16bit domain.
> > > Pass --enable-32bits-pci-domain to configure to support such devices
> > > (warning: it would break the library ABI, don't enable unless really
> > needed).
> > > lid velocity = 0.0016, prandtl # = 1., grashof # = 1.
> > > Number of SNES iterations = 2
> > > Possible error running Fortran example src/snes/tutorials/ex5f with 1
> > MPI process
> > > See https://petsc.org/release/faq/
> > > hwloc/linux: Ignoring PCI device with non-16bit domain.
> > > Pass --enable-32bits-pci-domain to configure to support such devices
> > > (warning: it would break the library ABI, don't enable unless really
> > needed).
> > > Number of SNES iterations =     3
> > > Completed test examples
> > > Error while running make check
> > > gmake[1]: *** [makefile:149: check] Error 1
> > > make: *** [GNUmakefile:17: check] Error 2
> > > ++++++++++++++++++++++++++++++++++++++++++++++++
> > > <configure.log><make.log>
> >
> >
> 
> 



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