[petsc-users] Error configuring external packages

Barry Smith bsmith at petsc.dev
Mon Nov 7 12:19:27 CST 2022


   The cmake in your path is broken

TESTING: locateCMake from config.packages.cmake(/gpfs/fs1/home/h/hngharti/hngharti/lsoft/petsc-gnu/config/BuildSystem/config/packages/cmake.py:53)
Looking for default CMake executable
    Checking for program /scinet/niagara/software/2019b/opt/gcc-9.4.0/openmpi/4.1.1/bin/cmake...not found
    Checking for program /scinet/niagara/software/2019b/opt/base/gcc/9.4.0/bin/cmake...not found
    Checking for program /home/h/hngharti/hngharti/lsoft/cmake-3.23.1/bin/cmake...found
              Defined make macro "CMAKE" to "/home/h/hngharti/hngharti/lsoft/cmake-3.23.1/bin/cmake"
Looking for default CTest executable
    Checking for program /scinet/niagara/software/2019b/opt/gcc-9.4.0/openmpi/4.1.1/bin/ctest...not found
    Checking for program /scinet/niagara/software/2019b/opt/base/gcc/9.4.0/bin/ctest...not found
    Checking for program /home/h/hngharti/hngharti/lsoft/cmake-3.23.1/bin/ctest...found
              Defined make macro "CTEST" to "/home/h/hngharti/hngharti/lsoft/cmake-3.23.1/bin/ctest"
Executing: /home/h/hngharti/hngharti/lsoft/cmake-3.23.1/bin/cmake --version
cmake --version failed: Could not execute "['/home/h/hngharti/hngharti/lsoft/cmake-3.23.1/bin/cmake --version']":
/home/h/hngharti/hngharti/lsoft/cmake-3.23.1/bin/cmake: error while loading shared libraries: libfabric.so.1: cannot open shared object file: No such file or directory

you need to either install a better cmake or have PETSc install one using --download-cmake



> On Nov 7, 2022, at 12:48 PM, Hom Nath Gharti <hng.email at gmail.com> wrote:
> 
> Dear all,
> 
> I am trying to compile the latest version, but I am getting the following error:
> *******************************************************************************
>          UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for details):
> -------------------------------------------------------------------------------
> Error configuring METIS with CMake
> *******************************************************************************
> 
> When I remove this package from the configure option, I get the same error for other packages. Is there something wrong with my configure command or compilers?
> 
> Attached is the configure log file.
> 
> Best,
> Hom Nath
> <configure.log>



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