[petsc-users] Running example problem

[Fazlul Huq]

I think it's okay to have a separate version of hypre for PETSc.
So, what I understand is I have to do,

./configure --with-cc=gcc --with-cxx=g++ --with-fc=gfortran
--download-mpich --download-fblaslapack --download-hypre
make all test

Is that all?
Am I missing something?

Thank you.
Sincerely,
Huq


On Thu, Jun 4, 2020 at 11:04 AM Satish Balay <balay at mcs.anl.gov> wrote:

> Its best to use --download-hypre with PETSc configure - it installs a
> compatible version of hypre.
>
> If you have a pre-installed hypre, you'l have to:
> - make sure its compatible version
> - its built with the same MPI, compilers etc as PETSc
> - you can use --with-hypre-dir option with PETSc configure
>
> Satish
>
> On Thu, 4 Jun 2020, Fazlul Huq wrote:
>
> > I have HYPRE installed in my machine.
> > Ithink, I need to compile PETSc with HYPRE.
> > I'm not clear about how to do that?
> >
> > Thank you.
> > Sincerely,
> > Huq
> >
> > On Thu, Jun 4, 2020 at 10:13 AM Matthew Knepley <knepley at gmail.com>
> wrote:
> >
> > > On Thu, Jun 4, 2020 at 10:28 AM Fazlul Huq <huq2090 at gmail.com> wrote:
> > >
> > >> Thank you.
> > >> Working now.
> > >>
> > >> I think to run the following command I need to configure PETSc with
> HYPRE.
> > >> mpiexec -np 1 ./poisson_m -n 100000 -pc_type hypre -pc_hypre_type
> > >> boomerang
> > >>
> > >> If I am right, can you please guide me how to configure with HYPRE and
> > >> run the above command?
> > >>
> > >
> > > --download-hypre
> > >
> > >   Thanks,
> > >
> > >      Matt
> > >
> > >
> > >> Thank you.
> > >> Sincerely,
> > >> Huq
> > >>
> > >> On Thu, Jun 4, 2020 at 8:34 AM Matthew Knepley <knepley at gmail.com>
> wrote:
> > >>
> > >>>
> > >>> On Thu, Jun 4, 2020 at 9:19 AM Dave May <dave.mayhem23 at gmail.com>
> wrote:
> > >>>
> > >>>>
> > >>>>
> > >>>> On Thu, 4 Jun 2020 at 14:17, Dave May <dave.mayhem23 at gmail.com>
> wrote:
> > >>>>
> > >>>>>
> > >>>>>
> > >>>>> On Thu, 4 Jun 2020 at 14:15, Matthew Knepley <knepley at gmail.com>
> > >>>>> wrote:
> > >>>>>
> > >>>>>> On Thu, Jun 4, 2020 at 9:12 AM Fazlul Huq <huq2090 at gmail.com>
> wrote:
> > >>>>>>
> > >>>>>>> Somehow, make is not working.
> > >>>>>>> Please find the attachment herewith for the terminal readout.
> > >>>>>>>
> > >>>>>>
> > >>>>>> Since you built with PETSC_ARCH=linux-gnu, you need that in your
> > >>>>>> environment.
> > >>>>>>
> > >>>>>
> > >>>>> Or just do
> > >>>>>
> > >>>>> make ex5 PETSC_ARCH=linux-gnu
> > >>>>>
> > >>>>
> > >>>> sorry I hit send without checking your png)
> > >>>> The command should be
> > >>>>
> > >>>> make ex5 PETSC_ARCH=arch-linux2-c-debug
> > >>>>
> > >>>
> > >>> No, your first one was right.
> > >>>
> > >>>    Matt
> > >>>
> > >>>
> > >>>>
> > >>>>>
> > >>>>>
> > >>>>>>
> > >>>>>>   Thanks,
> > >>>>>>
> > >>>>>>      Matt
> > >>>>>>
> > >>>>>>
> > >>>>>>> Thank you.
> > >>>>>>>
> > >>>>>>> Sincerely,
> > >>>>>>> Huq
> > >>>>>>>
> > >>>>>>> On Thu, Jun 4, 2020 at 7:57 AM Matthew Knepley <
> knepley at gmail.com>
> > >>>>>>> wrote:
> > >>>>>>>
> > >>>>>>>> On Thu, Jun 4, 2020 at 8:53 AM Fazlul Huq <huq2090 at gmail.com>
> > >>>>>>>> wrote:
> > >>>>>>>>
> > >>>>>>>>> Hello,
> > >>>>>>>>>
> > >>>>>>>>> I have a very preliminary question!
> > >>>>>>>>> I think I have installed PETSc correctly cause I got following
> on
> > >>>>>>>>> the terminal:
> > >>>>>>>>>
> > >>>>>>>>> Command:
> > >>>>>>>>> make PETSC_DIR=/home/huq2090/petsc-3.10.2 PETSC_ARCH=linux-gnu
> > >>>>>>>>> check
> > >>>>>>>>> Response:
> > >>>>>>>>> Running check examples to verify correct installation
> > >>>>>>>>> Using PETSC_DIR=/home/huq2090/petsc-3.10.2 and
> PETSC_ARCH=linux-gnu
> > >>>>>>>>> C/C++ example src/snes/tutorials/ex19 run successfully with 1
> MPI
> > >>>>>>>>> process
> > >>>>>>>>> C/C++ example src/snes/tutorials/ex19 run successfully with 2
> MPI
> > >>>>>>>>> processes
> > >>>>>>>>> Fortran example src/snes/tutorials/ex5f run successfully with 1
> > >>>>>>>>> MPI process
> > >>>>>>>>> Completed test examples
> > >>>>>>>>>
> > >>>>>>>>> Now, I am trying to run an example from the list of provided
> > >>>>>>>>> examples.
> > >>>>>>>>> Can you please help me out, how to run an example problem from
> the
> > >>>>>>>>> list of examples?
> > >>>>>>>>> I mean, how to make executable and run the executable?
> > >>>>>>>>>
> > >>>>>>>>
> > >>>>>>>> cd $PETSC_DIR
> > >>>>>>>> cd src/snes/tutorials
> > >>>>>>>> make ex5
> > >>>>>>>> ./ex5 -snes_monitor
> > >>>>>>>>
> > >>>>>>>>   Thanks,
> > >>>>>>>>
> > >>>>>>>>      Matt
> > >>>>>>>>
> > >>>>>>>>
> > >>>>>>>>> Thank you.
> > >>>>>>>>> Sincerely,
> > >>>>>>>>> Huq
> > >>>>>>>>> --
> > >>>>>>>>>
> > >>>>>>>>> Fazlul Huq
> > >>>>>>>>> Graduate Research Assistant
> > >>>>>>>>> Department of Nuclear, Plasma & Radiological Engineering (NPRE)
> > >>>>>>>>> University of Illinois at Urbana-Champaign (UIUC)
> > >>>>>>>>> E-mail: huq2090 at gmail.com
> > >>>>>>>>>
> > >>>>>>>>
> > >>>>>>>>
> > >>>>>>>> --
> > >>>>>>>> What most experimenters take for granted before they begin their
> > >>>>>>>> experiments is infinitely more interesting than any results to
> which their
> > >>>>>>>> experiments lead.
> > >>>>>>>> -- Norbert Wiener
> > >>>>>>>>
> > >>>>>>>> https://www.cse.buffalo.edu/~knepley/
> > >>>>>>>> <http://www.cse.buffalo.edu/~knepley/>
> > >>>>>>>>
> > >>>>>>>
> > >>>>>>>
> > >>>>>>> --
> > >>>>>>>
> > >>>>>>> Fazlul Huq
> > >>>>>>> Graduate Research Assistant
> > >>>>>>> Department of Nuclear, Plasma & Radiological Engineering (NPRE)
> > >>>>>>> University of Illinois at Urbana-Champaign (UIUC)
> > >>>>>>> E-mail: huq2090 at gmail.com
> > >>>>>>>
> > >>>>>>
> > >>>>>>
> > >>>>>> --
> > >>>>>> What most experimenters take for granted before they begin their
> > >>>>>> experiments is infinitely more interesting than any results to
> which their
> > >>>>>> experiments lead.
> > >>>>>> -- Norbert Wiener
> > >>>>>>
> > >>>>>> https://www.cse.buffalo.edu/~knepley/
> > >>>>>> <http://www.cse.buffalo.edu/~knepley/>
> > >>>>>>
> > >>>>>
> > >>>
> > >>> --
> > >>> What most experimenters take for granted before they begin their
> > >>> experiments is infinitely more interesting than any results to which
> their
> > >>> experiments lead.
> > >>> -- Norbert Wiener
> > >>>
> > >>> https://www.cse.buffalo.edu/~knepley/
> > >>> <http://www.cse.buffalo.edu/~knepley/>
> > >>>
> > >>
> > >>
> > >> --
> > >>
> > >> Fazlul Huq
> > >> Graduate Research Assistant
> > >> Department of Nuclear, Plasma & Radiological Engineering (NPRE)
> > >> University of Illinois at Urbana-Champaign (UIUC)
> > >> E-mail: huq2090 at gmail.com
> > >>
> > >
> > >
> > > --
> > > What most experimenters take for granted before they begin their
> > > experiments is infinitely more interesting than any results to which
> their
> > > experiments lead.
> > > -- Norbert Wiener
> > >
> > > https://www.cse.buffalo.edu/~knepley/
> > > <http://www.cse.buffalo.edu/~knepley/>
> > >
> >
> >
> >
>
>

-- 

Fazlul Huq
Graduate Research Assistant
Department of Nuclear, Plasma & Radiological Engineering (NPRE)
University of Illinois at Urbana-Champaign (UIUC)
E-mail: huq2090 at gmail.com
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