[petsc-users] DMGlobalToLocal acting weird
Smith, Barry F.
bsmith at mcs.anl.gov
Mon Jul 2 18:20:48 CDT 2018
> On Jul 2, 2018, at 5:42 PM, Manuel Valera <mvalera-w at sdsu.edu> wrote:
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> On Mon, Jul 2, 2018 at 3:04 PM, Smith, Barry F. <bsmith at mcs.anl.gov> wrote:
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> First make sure that getCenterInfo(daScalars, xstart, ystart, zstart, xend, yend, zend) returns what it should.
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> It does, i am also working in one processor only for now.
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> remove the 99 business and print out the arrtemp() and TO() values. Are they correct?
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> They are not, i'm using maximum and minimum as probes to print into, but the minimum of T0 is 1 and is 0 for arrtemp,
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> What is DimTemperature? Shouldn't it be LocTempature?
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> Yes, sorry about that,
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> Print out the values in tdim().
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> Yes, the same as with arrtemp/T0
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> Sorry i didn't mention i was debugging by printing the extremas of the arrays,
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> From your answer you seem to think the problem is in my code's side and it may very well be, but from the DMGlobalToLocalBegin there is a warning saying INSERT_VALUES doesn't work with DMDAs, is this still an issue or have been fixed?
The warning is for DMLocalToGlobalBegin/End() not GlobalToLocal()
> i understand it looks like these are two different problems in my code,
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> Thanks,
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> Barry
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> > On Jul 2, 2018, at 2:58 PM, Manuel Valera <mvalera-w at sdsu.edu> wrote:
> >
> > Hi guys,
> >
> > I've noticed a bug in my code that seems to happen right after a call to DMGlobalToLocalBegin/End and i can't seem to find a reason, it goes like this:
> >
> > I create the DMDA (daScalars) with the following:
> >
> > bx = DM_BOUNDARY_GHOSTED
> > by = DM_BOUNDARY_PERIODIC
> > bz = DM_BOUNDARY_GHOSTED
> > dof = 1
> > stw = 3
> > call DMDACreate3d(PETSC_COMM_WORLD,bx,by,bz,DMDA_STENCIL_BOX,gridx,gridy,gridz,PETSC_DECIDE,PETSC_DECIDE,PETSC_DECIDE, & dof,stw,PETSC_NULL_INTEGER,PETSC_NULL_INTEGER,PETSC_NULL_INTEGER,daScalars,ierr)
> > call DMSetFromOptions(daScalars,ierr)
> > call DMSetUp(daScalars,ierr)
> >
> > Then i read from a file the temperature and salinity fields of my problems, those two are giving the trouble, i do it with this template:
> >
> > call DMCreateGlobalVector(daScalars,gTemperature,ierr)
> > call DMDAVecGetArrayF90(daScalars,gTemperature,arrtemp,ierr)
> > arrtemp = 99.0d0 !no idea why this fixes the problem -mv 62518
> > call getCenterInfo(daScalars, xstart, ystart, zstart, xend, yend, zend)
> > do k=zstart,zend-1
> > do j=ystart,yend-1
> > do i=xstart,xend-1
> > arrtemp(i,j,k) = T0(i+1,j+1,k+1)
> > enddo
> > enddo
> > enddo
> > call DMDAVecRestoreArrayF90(daScalars,gTemperature,arrtemp,ierr)
> > call DMCreateLocalVector(daScalars,LocTemperature,ierr)
> > call DMGlobalToLocalBegin(daScalars,gTemperature,INSERT_VALUES,LocTemperature,ierr)
> > call DMGlobalToLocalEnd(daScalars,gTemperature,INSERT_VALUES,LocTemperature,ierr)
> >
> >
> > Now here is the first weirdness, if i assign a number to my array it does behave as it should for the global quantity, but it must be a greater number than the maximum of the field for this to happen, so i assign 99.0 arbitrarily, otherwise it doesn't read the array correctly, but it does as of now,
> >
> > Next, the last two lines communicate the array to the local counterparts, but when i read LocTemperature with:
> >
> > call DMDAVecGetArrayReadF90(daScalars,DimTemperature,tdim,ierr)
> > print*,'Copied MinT0: ', minval(tdim)
> > call DMDAVecRestoreArrayReadF90(daScalars,DimTemperature,tdim,ierr)
> >
> > That array minimum doesn't coincide with the global minimum, it should be 1.000 but it is just 0.000, the same happens with the Salinity following an identical approach,
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> > Any ideas on where to start looking? i have last month's PETSc build,
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> > I'm running in 1 processor for now,
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> > Thanks,
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> > Manuel
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