[petsc-users] valgrind

[paul zhang]

I did use the PETSc makefiles. Should I include the valgrind path in my own
make file again?

[hzh225 at dlxlogin2-2 petsc-3.5.2]$ pwd
/home/hzh225/LIB_CFD/nP/petsc-3.5.2
[hzh225 at dlxlogin2-2 petsc-3.5.2]$ make getincludedirs
-I/home/hzh225/LIB_CFD/nP/petsc-3.5.2/include
-I/home/hzh225/LIB_CFD/nP/petsc-3.5.2/linux-gnu-intel/include
-I/share/cluster/RHEL6.2/x86_64/apps/valgrind/3.9.0/include

Huaibao (Paul) Zhang
*Gas Surface Interactions Lab*
Department of Mechanical Engineering
University of Kentucky,
Lexington,
KY, 40506-0503
*Office*: 216 Ralph G. Anderson Building
*Web*:gsil.engineering.uky.edu

On Mon, Dec 1, 2014 at 11:55 AM, Matthew Knepley <knepley at gmail.com> wrote:

> On Mon, Dec 1, 2014 at 10:43 AM, paul zhang <paulhuaizhang at gmail.com>
> wrote:
>
>> Matt,
>>
>> Thanks for your reply. I am able to compile PETSc. And I went through the
>> default tests. Now when I go to my code, I got problems.
>>
>
> I am assuming that you put flags in your makefiles rather than using the
> PETSc makefiles. You need all the includes you get from
>
>    make getincludedirs
>
>     Matt
>
>
>> [hzh225 at dlxlogin2-1 petsc-3.5]$ make all
>> [100%] Building CXX object CMakeFiles/kats.dir/main.cc.o
>> /home/hzh225/LIB_CFD/nP/petsc-3.5.2/include/petscsys.h(1760):
>> catastrophic error: cannot open source file "valgrind/valgrind.h"
>>   #  include <valgrind/valgrind.h>
>>                                   ^
>>
>> compilation aborted for /home/hzh225/CMake/petsc/petsc-3.5/main.cc (code
>> 4)
>> make[2]: *** [CMakeFiles/kats.dir/main.cc.o] Error 4
>> make[1]: *** [CMakeFiles/kats.dir/all] Error 2
>> make: *** [all] Error 2
>>
>>
>> Huaibao (Paul) Zhang
>> *Gas Surface Interactions Lab*
>> Department of Mechanical Engineering
>> University of Kentucky,
>> Lexington,
>> KY, 40506-0503
>> *Office*: 216 Ralph G. Anderson Building
>> *Web*:gsil.engineering.uky.edu
>>
>> On Mon, Dec 1, 2014 at 11:28 AM, Matthew Knepley <knepley at gmail.com>
>> wrote:
>>
>>> On Mon, Dec 1, 2014 at 10:21 AM, paul zhang <paulhuaizhang at gmail.com>
>>> wrote:
>>>
>>>> Hi All,
>>>>
>>>> How to enable the valgrind flag? I installed that by myself locally.
>>>>
>>>>       It appears you do not have valgrind installed on your system.
>>>>
>>>>
>>>>                    We HIGHLY recommend you install it from
>>>> www.valgrind.org
>>>>
>>>>                                                   Or install valgrind-devel
>>>> or equivalent using your package manager.
>>>>
>>>>                                                            Then rerun
>>>> ./configure
>>>>
>>>>
>>>>
>>>
>>> We could not find the valgrind header (valgrind.h). You can use
>>>
>>>   --with-valgrind-dir=<path>
>>>
>>> so that it can find the path/include/valgrind/valgrind.h
>>>
>>>   Thanks,
>>>
>>>     Matt
>>>
>>>
>>>> Thanks,
>>>> Paul
>>>>
>>>>
>>>> Huaibao (Paul) Zhang
>>>>
>>>>
>>>
>>>
>>> --
>>> What most experimenters take for granted before they begin their
>>> experiments is infinitely more interesting than any results to which their
>>> experiments lead.
>>> -- Norbert Wiener
>>>
>>
>>
>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which their
> experiments lead.
> -- Norbert Wiener
>
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