[petsc-users] Problem with PETSc-3.2 configuration

Barry Smith bsmith at mcs.anl.gov
Tue Sep 13 19:48:46 CDT 2011


  Also that gfortran compiler is terribly old, you really should install the 4.6 version of the Gnu compiler suite instead of living with that old stuff.

   Barry

On Sep 13, 2011, at 6:13 PM, Satish Balay wrote:

> Ok - this is on a RHEL5  box. And I'm able to reproduce the internal compiler error.
> 
>> mumps_static_mapping.F:333: internal compiler error: in modified_type_die, at dwarf2out.c:8495
> 
> The error is in debug symbol handler in the compiler. Looks like you
> can workarround this by using optized build. i.e
> 
> --with-debugging=0
> 
> or debug build with:
> 
> [default --with-debugging=1 ] FOPTFLAGS='-g -O'
> 
> Satish
> 
> On Tue, 13 Sep 2011, Rongliang Chen wrote:
> 
>> Hi Jed and Satish,
>> 
>> Thank you for your reply.
>> 
>> Following is the information of the compilers.
>> mpicc -show
>> 
>> gcc -I/curc/tools/free/redhat_5_x86_64/openmpi-1.4.3_ib/include -pthread
>> -L/curc/tools/free/redhat_5_x86_64/openmpi-1.4.3_ib/lib -lmpi -lopen-rte
>> -lopen-pal -ldl -Wl,--export-dynamic -lnsl -lutil -lm -ldl
>> 
>> mpif90 -show
>> 
>> gfortran -I/curc/tools/free/redhat_5_x86_64/openmpi-1.4.3_ib/include
>> -pthread -I/curc/tools/free/redhat_5_x86_64/openmpi-1.4.3_ib/lib
>> -L/curc/tools/free/redhat_5_x86_64/openmpi-1.4.3_ib/lib -lmpi_f90 -lmpi_f77
>> -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl -lutil -lm -ldl
>> 
>> mpicc --version
>> 
>> gcc (GCC) 4.1.2 20080704 (Red Hat 4.1.2-50)
>> Copyright (C) 2006 Free Software Foundation, Inc.
>> This is free software; see the source for copying conditions.  There is NO
>> warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
>> 
>> mpif90 --version
>> 
>> GNU Fortran (GCC) 4.1.2 20080704 (Red Hat 4.1.2-50)
>> Copyright (C) 2007 Free Software Foundation, Inc.
>> 
>> GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
>> You may redistribute copies of GNU Fortran
>> under the terms of the GNU General Public License.
>> For more information about these matters, see the file named COPYING
>> 
>> 
>> Best,
>> Rongliang
>> 
>> 
>> ------------------------------
>>> 
>>> Message: 5
>>> Date: Tue, 13 Sep 2011 23:29:56 +0200
>>> From: Jed Brown <jedbrown at mcs.anl.gov>
>>> Subject: Re: [petsc-users] Problem with PETSc-3.2 configuration
>>> To: PETSc users list <petsc-users at mcs.anl.gov>
>>> Message-ID:
>>>       <CAM9tzSmy4q3u2kqNp_gVj3BQ8S65Zc79v3M4ddFoL5f0BHwZ+g at mail.gmail.com
>>>> 
>>> Content-Type: text/plain; charset="utf-8"
>>> 
>>> On Tue, Sep 13, 2011 at 23:26, Rongliang Chen <rongliang.chan at gmail.com
>>>> wrote:
>>> 
>>>> mumps_static_mapping.F: In function ?mumps_369?:
>>>> mumps_static_mapping.F:333: internal compiler error: in
>>> modified_type_die,
>>>> at dwarf2out.c:8495
>>>> Please submit a full bug report,
>>>> with preprocessed source if appropriate.
>>>> See <URL:http://bugzilla.redhat.com/bugzilla> for instructions.
>>>> 
>>> 
>>> Um, internal compiler error. File a bug report with your vendor and/or
>>> upgrade your compilers?
>>> -------------- next part --------------
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>>>> 
>>> 
>>> ------------------------------
>>> 
>>> Message: 6
>>> Date: Tue, 13 Sep 2011 16:43:04 -0500 (CDT)
>>> From: Satish Balay <balay at mcs.anl.gov>
>>> Subject: Re: [petsc-users] Problem with PETSc-3.2 configuration
>>> To: PETSc users list <petsc-users at mcs.anl.gov>
>>> Message-ID: <alpine.LFD.2.02.1109131641320.2462 at asterix>
>>> Content-Type: text/plain; charset="iso-8859-7"
>>> 
>>> On Tue, 13 Sep 2011, Jed Brown wrote:
>>> 
>>>> On Tue, Sep 13, 2011 at 23:26, Rongliang Chen <rongliang.chan at gmail.com
>>>> wrote:
>>>> 
>>>>> mumps_static_mapping.F: In function ?mumps_369?:
>>>>> mumps_static_mapping.F:333: internal compiler error: in
>>> modified_type_die,
>>>>> at dwarf2out.c:8495
>>>>> Please submit a full bug report,
>>>>> with preprocessed source if appropriate.
>>>>> See <URL:http://bugzilla.redhat.com/bugzilla> for instructions.
>>>>> 
>>>> 
>>>> Um, internal compiler error. File a bug report with your vendor and/or
>>>> upgrade your compilers?
>>> 
>>> What version of compilers are you using?
>>> 
>>> mpicc -show
>>> mpif90 -show
>>> mpicc --version
>>> mpif90 --version
>>> 
>>> Satish
>>> 
>>> ------------------------------
>>> 
>>> _______________________________________________
>>> petsc-users mailing list
>>> petsc-users at mcs.anl.gov
>>> https://lists.mcs.anl.gov/mailman/listinfo/petsc-users
>>> 
>>> 
>>> End of petsc-users Digest, Vol 33, Issue 36
>>> *******************************************
>>> 
>> 
> 



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