[petsc-users] Problem with PETSc-3.2 configuration

Satish Balay balay at mcs.anl.gov
Tue Sep 13 18:13:31 CDT 2011


Ok - this is on a RHEL5  box. And I'm able to reproduce the internal compiler error.

> mumps_static_mapping.F:333: internal compiler error: in modified_type_die, at dwarf2out.c:8495

The error is in debug symbol handler in the compiler. Looks like you
can workarround this by using optized build. i.e

--with-debugging=0

or debug build with:

[default --with-debugging=1 ] FOPTFLAGS='-g -O'

Satish

On Tue, 13 Sep 2011, Rongliang Chen wrote:

> Hi Jed and Satish,
> 
> Thank you for your reply.
> 
> Following is the information of the compilers.
> mpicc -show
> 
> gcc -I/curc/tools/free/redhat_5_x86_64/openmpi-1.4.3_ib/include -pthread
> -L/curc/tools/free/redhat_5_x86_64/openmpi-1.4.3_ib/lib -lmpi -lopen-rte
> -lopen-pal -ldl -Wl,--export-dynamic -lnsl -lutil -lm -ldl
> 
> mpif90 -show
> 
> gfortran -I/curc/tools/free/redhat_5_x86_64/openmpi-1.4.3_ib/include
> -pthread -I/curc/tools/free/redhat_5_x86_64/openmpi-1.4.3_ib/lib
> -L/curc/tools/free/redhat_5_x86_64/openmpi-1.4.3_ib/lib -lmpi_f90 -lmpi_f77
> -lmpi -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl -lutil -lm -ldl
> 
> mpicc --version
> 
> gcc (GCC) 4.1.2 20080704 (Red Hat 4.1.2-50)
> Copyright (C) 2006 Free Software Foundation, Inc.
> This is free software; see the source for copying conditions.  There is NO
> warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
> 
> mpif90 --version
> 
> GNU Fortran (GCC) 4.1.2 20080704 (Red Hat 4.1.2-50)
> Copyright (C) 2007 Free Software Foundation, Inc.
> 
> GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
> You may redistribute copies of GNU Fortran
> under the terms of the GNU General Public License.
> For more information about these matters, see the file named COPYING
> 
> 
> Best,
> Rongliang
> 
> 
> ------------------------------
> >
> > Message: 5
> > Date: Tue, 13 Sep 2011 23:29:56 +0200
> > From: Jed Brown <jedbrown at mcs.anl.gov>
> > Subject: Re: [petsc-users] Problem with PETSc-3.2 configuration
> > To: PETSc users list <petsc-users at mcs.anl.gov>
> > Message-ID:
> >        <CAM9tzSmy4q3u2kqNp_gVj3BQ8S65Zc79v3M4ddFoL5f0BHwZ+g at mail.gmail.com
> > >
> > Content-Type: text/plain; charset="utf-8"
> >
> > On Tue, Sep 13, 2011 at 23:26, Rongliang Chen <rongliang.chan at gmail.com
> > >wrote:
> >
> > > mumps_static_mapping.F: In function ?mumps_369?:
> > > mumps_static_mapping.F:333: internal compiler error: in
> > modified_type_die,
> > > at dwarf2out.c:8495
> > > Please submit a full bug report,
> > > with preprocessed source if appropriate.
> > > See <URL:http://bugzilla.redhat.com/bugzilla> for instructions.
> > >
> >
> > Um, internal compiler error. File a bug report with your vendor and/or
> > upgrade your compilers?
> > -------------- next part --------------
> > An HTML attachment was scrubbed...
> > URL: <
> > http://lists.mcs.anl.gov/pipermail/petsc-users/attachments/20110913/eced13ed/attachment-0001.htm
> > >
> >
> > ------------------------------
> >
> > Message: 6
> > Date: Tue, 13 Sep 2011 16:43:04 -0500 (CDT)
> > From: Satish Balay <balay at mcs.anl.gov>
> > Subject: Re: [petsc-users] Problem with PETSc-3.2 configuration
> > To: PETSc users list <petsc-users at mcs.anl.gov>
> > Message-ID: <alpine.LFD.2.02.1109131641320.2462 at asterix>
> > Content-Type: text/plain; charset="iso-8859-7"
> >
> > On Tue, 13 Sep 2011, Jed Brown wrote:
> >
> > > On Tue, Sep 13, 2011 at 23:26, Rongliang Chen <rongliang.chan at gmail.com
> > >wrote:
> > >
> > > > mumps_static_mapping.F: In function ?mumps_369?:
> > > > mumps_static_mapping.F:333: internal compiler error: in
> > modified_type_die,
> > > > at dwarf2out.c:8495
> > > > Please submit a full bug report,
> > > > with preprocessed source if appropriate.
> > > > See <URL:http://bugzilla.redhat.com/bugzilla> for instructions.
> > > >
> > >
> > > Um, internal compiler error. File a bug report with your vendor and/or
> > > upgrade your compilers?
> >
> > What version of compilers are you using?
> >
> > mpicc -show
> > mpif90 -show
> > mpicc --version
> > mpif90 --version
> >
> > Satish
> >
> > ------------------------------
> >
> > _______________________________________________
> > petsc-users mailing list
> > petsc-users at mcs.anl.gov
> > https://lists.mcs.anl.gov/mailman/listinfo/petsc-users
> >
> >
> > End of petsc-users Digest, Vol 33, Issue 36
> > *******************************************
> >
> 



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