make test

Sun Jul 5 12:57:28 CDT 2009

Looks like some issue with your MPI. You might want to talk with your
sysadmin about it.

Also send us some compile logs - so we know whats hapenning. For eg:

cd src/ksp/ksp/examples/tutorials/
make ex2
mpiexec -n 2 ./ex2 [or however you are supporsed to run MPI binaries on this cluster]

BTW: If you are currently doing development - don't bother with a
cluster MPI - and just use --download-mpich=1

Satish

On Sun, 5 Jul 2009, Yixun Liu wrote:

> Hi,
> After making test, I received a lot of warnings and lib load failures.
> 
> Running test examples to verify correct installation
> Possible error running C/C++ src/snes/examples/tutorials/ex19 with 1 MPI
> process
> See http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-cma"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-cma-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mthca0-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mthca0-2"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mlx4_0-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mlx4_0-2"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-iwarp"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> --------------------------------------------------------------------------
> [0,1,0]: uDAPL on host md was unable to find any NICs.
> Another transport will be used instead, although this may result in
> lower performance.
> --------------------------------------------------------------------------
> lid velocity = 0.0016, prandtl # = 1, grashof # = 1
> Number of Newton iterations = 2
> lid velocity = 0.0016, prandtl # = 1, grashof # = 1
> Number of Newton iterations = 2
> Possible error running C/C++ src/snes/examples/tutorials/ex19 with 2 MPI
> processes
> See http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-cma"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-cma-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mthca0-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mthca0-2"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mlx4_0-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mlx4_0-2"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-iwarp"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> --------------------------------------------------------------------------
> [0,1,1]: uDAPL on host md was unable to find any NICs.
> Another transport will be used instead, although this may result in
> lower performance.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-cma"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-cma-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mthca0-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mthca0-2"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mlx4_0-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mlx4_0-2"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-iwarp"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> --------------------------------------------------------------------------
> [0,1,0]: uDAPL on host md was unable to find any NICs.
> Another transport will be used instead, although this may result in
> lower performance.
> --------------------------------------------------------------------------
> lid velocity = 0.0016, prandtl # = 1, grashof # = 1
> Number of Newton iterations = 2
> lid velocity = 0.0016, prandtl # = 1, grashof # = 1
> Number of Newton iterations = 2
> Possible error running Graphics examples
> src/snes/examples/tutorials/ex19 1 MPI process
> See http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-cma"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-cma-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mthca0-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mthca0-2"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mlx4_0-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mlx4_0-2"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-iwarp"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> --------------------------------------------------------------------------
> [0,1,0]: uDAPL on host md was unable to find any NICs.
> Another transport will be used instead, although this may result in
> lower performance.
> --------------------------------------------------------------------------
> lid velocity = 0.0016, prandtl # = 1, grashof # = 1
> Number of Newton iterations = 2
> lid velocity = 0.0016, prandtl # = 1, grashof # = 1
> Number of Newton iterations = 2
> Error running Fortran example src/snes/examples/tutorials/ex5f with 1
> MPI process
> See http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-cma"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-cma-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mthca0-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mthca0-2"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mlx4_0-1"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplscm.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-mlx4_0-2"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> DAT: library load failure: /usr/lib64/libdaplcma.so.1: undefined symbol:
> dat_registry_add_provider
> --------------------------------------------------------------------------
> 
> WARNING: Failed to open "OpenIB-iwarp"
> [DAT_PROVIDER_NOT_FOUND:DAT_NAME_NOT_REGISTERED].
> This may be a real error or it may be an invalid entry in the uDAPL
> Registry which is contained in the dat.conf file. Contact your local
> System Administrator to confirm the availability of the interfaces in
> the dat.conf file.
> --------------------------------------------------------------------------
> --------------------------------------------------------------------------
> [0,1,0]: uDAPL on host md was unable to find any NICs.
> Another transport will be used instead, although this may result in
> lower performance.
> --------------------------------------------------------------------------
> Number of Newton iterations =     4
> Completed test examples
> 
> 
> Thanks.
> 
> Yixun
> 