Performance degradation after upgrade to 3.0.0
Matthew Knepley
knepley at gmail.com
Sun Feb 1 15:29:11 CST 2009
Can you send the matrix and rhs as PETSc binary output, and I will find out
what the difference is. It looks to me like the default ICC ordering
has changed.
Matt
On Sun, Feb 1, 2009 at 3:01 PM, Billy Araújo <billy at dem.uminho.pt> wrote:
> Hi,
>
> Here are the files that contain all the information below. You can see that the matrices are the same, unless I am missing something here. :)
>
> (I am resending them in compressed format).
>
> Regards,
>
> Billy.
>
>
> -----Original Message-----
> From: petsc-users-bounces at mcs.anl.gov on behalf of Matthew Knepley
> Sent: Sun 2/1/2009 6:07 PM
> To: PETSc users list
> Subject: Re: Performance degradation after upgrade to 3.0.0
>
> In order to determine what is happening you first should:
>
> 1) Confirm that the solver setup is identical using -ksp_view for
> both versions
>
> 2) Determine that the matrices are identical. Output both matrices using
> MatView() with a PetscBinaryViewer. You can diff the files, and
> you can also
> solver both matrices using KSP ex10.
>
> 3) Look at the residuals using -ksp_monitor. If they are different, something
> else has changed.
>
> Matt
>
> On Sun, Feb 1, 2009 at 6:32 AM, Billy Araújo <billy at dem.uminho.pt> wrote:
>>
>> Hi,
>>
>> I have also verified that there has been a degradation of performance using
>> the new 3.0 version:
>>
>> This is my function calling PETSc:
>>
>> KSP ksp;
>> PC pc;
>>
>> KSPCreate (PETSC_COMM_WORLD, &ksp);
>>
>> KSPSetOperators (ksp, *A, *A, DIFFERENT_NONZERO_PATTERN);
>>
>> KSPSetType (ksp, KSPFGMRES);
>>
>> KSPGetPC (ksp, &pc);
>>
>> PCSetType (pc, PrecondProc);
>>
>> KSPSetInitialGuessNonzero (ksp, PETSC_TRUE);
>>
>> KSPSetTolerances (ksp, 1E-50, maxtol, PETSC_DEFAULT, maxiter);
>>
>> KSPSetFromOptions (ksp);
>>
>> KSPSolve (ksp, *b, *x);
>>
>> KSPGetIterationNumber (ksp, iter);
>>
>> KSPGetResidualNorm (ksp, res);
>>
>> KSPDestroy (ksp);
>>
>>
>> with previous version 2.3.3-p6:
>>
>> Number of iterations: 42 Residual: +7.073781E-13 Time: +8.615024E-03
>>
>> now:
>>
>> Number of iterations: 500 Residual: +2.746161E-05 Time: +1.026870E-01
>>
>> It is reaching maximum number of iterations. The only thing I changed was:
>>
>> MatSetOption (*A, MAT_SYMMETRIC);
>> to
>> MatSetOption (*A, MAT_SYMMETRIC, PETSC_TRUE);
>>
>> I think I didn't change anything else.
>>
>>
>> Regards,
>>
>> Billy.
>>
>
>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which
> their experiments lead.
> -- Norbert Wiener
>
>
>
--
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which
their experiments lead.
-- Norbert Wiener
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