[petsc-dev] Hypre error on updated Perlmutter

Thu Dec 9 12:59:34 CST 2021

Well I found, accidentally, that turning CUDA aware MPI on with export
CRAY_ACCEL_TARGET=nvidia80
 seems to have fixed this.
Not sure what is going on.

On Thu, Dec 9, 2021 at 11:21 AM Mark Adams <mfadams at lbl.gov> wrote:

> I am getting this error. I have built this w/o hypre and the test are
> fine, including the CUDA tests.
> Any ideas?
>
> I notice that the tests use -dm_mat_type aijcusparse with hypre.
>
> Thanks,
> Mark
>
> 08:13 nid003929 adams/fix_mat_ex5k= perlmutter:~/petsc$ make
> PETSC_DIR=/global/homes/m/madams/petsc
> PETSC_ARCH=arch-perlmutter-opt-nvidia-cuda check
> Running check examples to verify correct installation
> Using PETSC_DIR=/global/homes/m/madams/petsc and
> PETSC_ARCH=arch-perlmutter-opt-nvidia-cuda
> C/C++ example src/snes/tutorials/ex19 run successfully with 1 MPI process
> C/C++ example src/snes/tutorials/ex19 run successfully with 2 MPI processes
> 1,5c1,70
> < lid velocity = 0.0016, prandtl # = 1., grashof # = 1.
> <   0 SNES Function norm 0.0406612
> <   1 SNES Function norm 4.12227e-06
> <   2 SNES Function norm 6.098e-11
> < Number of SNES iterations = 2
> ---
> > [0]PETSC ERROR: --------------------- Error Message
> --------------------------------------------------------------
> > [0]PETSC ERROR: GPU error
> > [0]PETSC ERROR: cuda error 46 (cudaErrorDevicesUnavailable) : all
> CUDA-capable devices are busy or unavailable
> > [0]PETSC ERROR: See https://petsc.org/release/faq/ for trouble shooting.
> > [0]PETSC ERROR: Petsc Development GIT revision: v3.16.1-442-gebb4a459f5
>  GIT Date: 2021-12-08 08:59:23 -0500
> > [0]PETSC ERROR: /global/u2/m/madams/petsc/src/snes/tutorials/./ex19 on a
>  named nid003929 by madams Thu Dec  9 08:13:49 2021
> > [0]PETSC ERROR: Configure options --CFLAGS="   -g -DLANDAU_DIM=2
> -DLANDAU_MAX_SPECIES=10 -DLANDAU_MAX_Q=4 -mp=gpu" --CXXFLAGS=" -g
> -DLANDAU_DIM=2 -DLANDAU_MAX_SPECIES=10 -DLANDAU_MAX_Q=4 -mp=gpu" --FFLAGS="
>   -g -mp=gpu" --with-cc=cc --with-cxx=CC --with-fc=ftn
> --with-cudac=/opt/nvidia/hpc_sdk/Linux_x86_64/21.9/compilers/bin/nvcc
> --with-debugging=0 --download-hypre=1 --with-cuda=1 --with-cuda-arch=80
> --with-mpiexec=srun --with-batch=0 --download-p4est=1 --with-zlib=1
> --with-make-np=8
> --prefix=/global/cfs/projectdirs/m3904/petsc/current/perlmutter-opt-nvidia21.9
> PETSC_ARCH=arch-perlmutter-opt-nvidia-cuda
> > [0]PETSC ERROR: #1 initialize() at
> /global/u2/m/madams/petsc/src/sys/objects/device/impls/cupm/cupmdevice.cxx:70
> > [0]PETSC ERROR: #2 getDevice() at
> /global/u2/m/madams/petsc/src/sys/objects/device/impls/cupm/cupmdevice.cxx:360
> > [0]PETSC ERROR: #3 PetscDeviceCreate() at
> /global/u2/m/madams/petsc/src/sys/objects/device/interface/device.cxx:102
> > [0]PETSC ERROR: #4 PetscDeviceInitializeDefaultDevice_Internal() at
> /global/u2/m/madams/petsc/src/sys/objects/device/interface/device.cxx:266
> > [1]PETSC ERROR: --------------------- Error Message
> --------------------------------------------------------------
> > [1]PETSC ERROR: GPU error
> > [1]PETSC ERROR: cuda error 46 (cudaErrorDevicesUnavailable) : all
> CUDA-capable devices are busy or unavailable
> > [1]PETSC ERROR: See https://petsc.org/release/faq/ for trouble shooting.
> > [1]PETSC ERROR: Petsc Development GIT revision: v3.16.1-442-gebb4a459f5
>  GIT Date: 2021-12-08 08:59:23 -0500
> > [1]PETSC ERROR: /global/u2/m/madams/petsc/src/snes/tutorials/./ex19 on a
>  named nid003929 by madams Thu Dec  9 08:13:49 2021
> > [1]PETSC ERROR: Configure options --CFLAGS="   -g -DLANDAU_DIM=2
> -DLANDAU_MAX_SPECIES=10 -DLANDAU_MAX_Q=4 -mp=gpu" --CXXFLAGS=" -g
> -DLANDAU_DIM=2 -DLANDAU_MAX_SPECIES=10 -DLANDAU_MAX_Q=4 -mp=gpu" --FFLAGS="
>   -g -mp=gpu" --with-cc=cc --with-cxx=CC --with-fc=ftn
> --with-cudac=/opt/nvidia/hpc_sdk/Linux_x86_64/21.9/compilers/bin/nvcc
> --with-debugging=0 --download-hypre=1 --with-cuda=1 --with-cuda-arch=80
> --with-mpiexec=srun --with-batch=0 --download-p4est=1 --with-zlib=1
> --with-make-np=8
> --prefix=/global/cfs/projectdirs/m3904/petsc/current/perlmutter-opt-nvidia21.9
> PETSC_ARCH=arch-perlmutter-opt-nvidia-cuda
> > [1]PETSC ERROR: #1 initialize() at
> /global/u2/m/madams/petsc/src/sys/objects/device/impls/cupm/cupmdevice.cxx:70
> > [1]PETSC ERROR: #2 getDevice() at
> /global/u2/m/madams/petsc/src/sys/objects/device/impls/cupm/cupmdevice.cxx:360
> > [1]PETSC ERROR: #3 PetscDeviceCreate() at
> /global/u2/m/madams/petsc/src/sys/objects/device/interface/device.cxx:102
> > [1]PETSC ERROR: #4 PetscDeviceInitializeDefaultDevice_Internal() at
> /global/u2/m/madams/petsc/src/sys/objects/device/interface/device.cxx:266
> > [1]PETSC ERROR: #5 PetscDeviceInitialize() at
> /global/u2/m/madams/petsc/src/sys/objects/device/interface/device.cxx:227
> > [1]PETSC ERROR: #6 PCCreate_HYPRE() at
> /global/u2/m/madams/petsc/src/ksp/pc/impls/hypre/hypre.c:2224
> > [1]PETSC ERROR: #7 PCSetType() at
> /global/u2/m/madams/petsc/src/ksp/pc/interface/pcset.c:84
> > [1]PETSC ERROR: #8 PCSetFromOptions() at
> /global/u2/m/madams/petsc/src/ksp/pc/interface/pcset.c:154
> > [1]PETSC ERROR: #9 KSPSetFromOptions() at
> /global/u2/m/madams/petsc/src/ksp/ksp/interface/itcl.c:356
> > [1]PETSC ERROR: #10 SNESSetFromOptions() at
> /global/u2/m/madams/petsc/src/snes/interface/snes.c:1113
> > [1]PETSC ERROR: #11 main() at ex19.c:150
> > [1]PETSC ERROR: PETSc Option Table entries:
> > [1]PETSC ERROR: -da_refine 3
> > [1]PETSC ERROR: -dm_mat_type aijcusparse
> > [1]PETSC ERROR: -dm_vec_type cuda
> > [0]PETSC ERROR: #5 PetscDeviceInitialize() at
> /global/u2/m/madams/petsc/src/sys/objects/device/interface/device.cxx:227
> > [0]PETSC ERROR: #6 PCCreate_HYPRE() at
> /global/u2/m/madams/petsc/src/ksp/pc/impls/hypre/hypre.c:2224
> > [0]PETSC ERROR: #7 PCSetType() at
> /global/u2/m/madams/petsc/src/ksp/pc/interface/pcset.c:84
> > [0]PETSC ERROR: #8 PCSetFromOptions() at
> /global/u2/m/madams/petsc/src/ksp/pc/interface/pcset.c:154
> > [0]PETSC ERROR: #9 KSPSetFromOptions() at
> /global/u2/m/madams/petsc/src/ksp/ksp/interface/itcl.c:356
> > [0]PETSC ERROR: #10 SNESSetFromOptions() at
> /global/u2/m/madams/petsc/src/snes/interface/snes.c:1113
> > [0]PETSC ERROR: #11 main() at ex19.c:150
> > [0]PETSC ERROR: PETSc Option Table entries:
> > [0]PETSC ERROR: -da_refine 3
> > [0]PETSC ERROR: -dm_mat_type aijcusparse
> > [0]PETSC ERROR: -dm_vec_type cuda
> > [0]PETSC ERROR: -ksp_norm_type unpreconditioned
> > [0]PETSC ERROR: -nox
> > [0]PETSC ERROR: -nox_warning
> > [0]PETSC ERROR: -pc_type hypre
> > [0]PETSC ERROR: -snes_monitor_short
> > [0]PETSC ERROR: -use_gpu_aware_mpi 0
> > [0]PETSC ERROR: ----------------End of Error Message -------send entire
> error message to petsc-maint at mcs.anl.gov----------
> > [1]PETSC ERROR: -ksp_norm_type unpreconditioned
> > [1]PETSC ERROR: -nox
> > [1]PETSC ERROR: -nox_warning
> > [1]PETSC ERROR: -pc_type hypre
> > [1]PETSC ERROR: -snes_monitor_short
> > [1]PETSC ERROR: -use_gpu_aware_mpi 0
> > [1]PETSC ERROR: ----------------End of Error Message -------send entire
> error message to petsc-maint at mcs.anl.gov----------
> > MPICH Notice [Rank 0] [job id 832277.2] [Thu Dec  9 08:13:50 2021]
> [nid003929] - Abort(97) (rank 0 in comm 0): application called
> MPI_Abort(MPI_COMM_WORLD, 97) - process 0
> >
> > aborting job:
> > application called MPI_Abort(MPI_COMM_WORLD, 97) - process 0
> > MPICH Notice [Rank 1] [job id 832277.2] [Thu Dec  9 08:13:50 2021]
> [nid003929] - Abort(97) (rank 1 in comm 0): application called
> MPI_Abort(MPI_COMM_WORLD, 97) - process 1
> >
> > aborting job:
> > application called MPI_Abort(MPI_COMM_WORLD, 97) - process 1
> > srun: error: nid003929: task 1: Exited with exit code 255
> > srun: launch/slurm: _step_signal: Terminating StepId=832277.2
> > slurmstepd: error: *** STEP 832277.2 ON nid003929 CANCELLED AT
> 2021-12-09T16:13:50 ***
> > srun: error: nid003929: task 0: Exited with exit code 255
> /global/homes/m/madams/petsc/src/snes/tutorials
> Possible problem with ex19 running with hypre, diffs above
> =========================================
> C/C++ example src/snes/tutorials/ex19 run successfully with cuda
> Fortran example src/snes/tutorials/ex5f run successfully with 1 MPI process
>
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