[petsc-dev] pipeline failure

Mark Adams mfadams at lbl.gov
Mon Jul 13 15:11:40 CDT 2020


THis error was in this one also, plus warnings:

https://gitlab.com/petsc/petsc/-/jobs/636537354

"/export/home/glci/builds/zxfiRCGf/0/petsc/petsc/include/petsc/private/sectionimpl.h",
line 21: warning: operands have incompatible types:
struct  {pointer to long long perm, pointer to long long invPerm} ":" const
struct  {pointer to long long perm, pointer to long long invPerm}
"/export/home/glci/builds/zxfiRCGf/0/petsc/petsc/include/petsc/private/sectionimpl.h",
line 21: warning: operands have incompatible types:
struct  {pointer to long long perm, pointer to long long invPerm} ":" const
struct  {pointer to long long perm, pointer to long long invPerm}
"/export/home/glci/builds/zxfiRCGf/0/petsc/petsc/include/petsc/private/petscfeimpl.h",
line 19: warning: linker scope was specified more than once: "PETSCFE_SetUp"

On Mon, Jul 13, 2020 at 4:08 PM Mark Adams <mfadams at lbl.gov> wrote:

>
> On Mon, Jul 13, 2020 at 4:01 PM Matthew Knepley <knepley at gmail.com> wrote:
>
>> Do these have -single-library ?
>>
>
> This was in a single configuration, but it also happened in this one:
>
> /scratch/svcpetsc/glci-builds/qanz_veh/0/petsc/petsc/arch-ci-linux-pkgs-cxx-mlib/lib/libpetscdm.so:
> undefined reference to `TSGetDM'
> /scratch/svcpetsc/glci-builds/qanz_veh/0/petsc/petsc/arch-ci-linux-pkgs-cxx-mlib/lib/libpetscdm.so:
> undefined reference to `DMPlexSNESComputeJacobianFEM'
> collect2: error: ld returned 1 exit status
> gmakefile.test:185: recipe for target
> 'arch-ci-linux-pkgs-cxx-mlib/tests/mat/tests/ex96' failed
> make[2]: *** [arch-ci-linux-pkgs-cxx-mlib/tests/mat/tests/ex96] Error 1
> make[2]: *** Waiting for unfinished jobs....
> /scratch/svcpetsc/glci-builds/qanz_veh/0/petsc/petsc/lib/petsc/conf/test.common:26:
> recipe for target 'allgtest-tap' failed
> make[1]: *** [allgtest-tap] Error 2
> GNUmakefile:17: recipe for target 'allgtests-tap' failed
> make: *** [allgtests-tap] Error 2
> Running after_script
>
>
>>
>>   Thanks,
>>
>>      Matt
>>
>> On Mon, Jul 13, 2020 at 3:51 PM Mark Adams <mfadams at lbl.gov> wrote:
>>
>>> I am getting this error on two pipeline tests. They don't seem to have
>>> anything to do with my branch. I have gotten these several times today.
>>>
>>> /home/petsc/builds/KFnbdjNX/0/petsc/petsc/arch-ci-linux-cuda-single-cxx/lib/libpetscdm.so:
>>> undefined reference to `DMPlexSNESComputeJacobianFEM'
>>> /home/petsc/builds/KFnbdjNX/0/petsc/petsc/arch-ci-linux-cuda-single-cxx/lib/libpetscdm.so:
>>> undefined reference to `TSGetDM'
>>> collect2: error: ld returned 1 exit status
>>> make[2]: *** [arch-ci-linux-cuda-single-cxx/tests/mat/tests/ex240] Error
>>> 1
>>> make[2]: *** Waiting for unfinished jobs....
>>> gmakefile.test:185: recipe for target
>>> 'arch-ci-linux-cuda-single-cxx/tests/mat/tests/ex240' failed
>>> make[1]: *** [allgtest-tap] Error 2
>>> /home/petsc/builds/KFnbdjNX/0/petsc/petsc/lib/petsc/conf/test.common:26:
>>> recipe for target 'allgtest-tap' failed
>>> GNUmakefile:17: recipe for target 'allgtests-tap' failed
>>> make: *** [allgtests-tap] Error 2
>>>
>>
>>
>> --
>> What most experimenters take for granted before they begin their
>> experiments is infinitely more interesting than any results to which their
>> experiments lead.
>> -- Norbert Wiener
>>
>> https://www.cse.buffalo.edu/~knepley/
>> <http://www.cse.buffalo.edu/~knepley/>
>>
>
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