[petsc-dev] petsc-dev installation error on Edison

[Gautam Bisht]

Matt,

I'm using a particular changeset of petsc-dev (git checkout 0c8c14c5)
because PFLOTRAN is relying on that particular changeset. Can you point to
the changset that this was fixed in petsc-dev? Btw, is this issue fixed in
petsc release 3.5.1?

-Gautam.


On Fri, Aug 1, 2014 at 2:13 PM, Matthew Knepley <knepley at gmail.com> wrote:

> On Fri, Aug 1, 2014 at 4:06 PM, Gautam Bisht <gbisht at lbl.gov> wrote:
>
>> Hi,
>>
>> I'm getting an error while trying to install petsc-dev on Edison with GUN
>> compilers. Attached below is configure.log and additional command line
>> outputs.
>>
>
> Satish fixed this. Did you pull?
>
>   Thanks,
>
>     Matt
>
>
>>
>> > module list -t
>> Currently Loaded Modulefiles:
>> modules/3.2.6.7
>> nsg/1.2.0
>> eswrap/1.1.0-1.020200.1130.0
>> switch/1.0-1.0502.51632.2.84.ari
>> craype-network-aries
>> craype/2.1.2
>> craype-ivybridge
>> cray-shmem/7.0.0
>> cray-mpich/7.0.0
>> torque/4.2.7
>> moab/7.2.7-e7c070d1-b3-SUSE11
>> altd/1.0
>> darshan/2.3.0
>> usg-default-modules/1.1
>> gcc/4.9.0
>> cray-libsci/13.0.0
>> udreg/2.3.2-1.0502.8763.1.11.ari
>> ugni/5.0-1.0502.9037.7.26.ari
>> pmi/5.0.4-1.0000.10161.132.4.ari
>> dmapp/7.0.1-1.0502.9080.9.32.ari
>> gni-headers/3.0-1.0502.9038.7.4.ari
>> xpmem/0.1-2.0502.51169.1.11.ari
>> job/1.5.5-0.1_2.0502.52111.3.39.ari
>> csa/3.0.0-1_2.0502.51200.1.108.ari
>> alps/5.2.1-2.0502.8712.10.32.ari
>> rca/1.0.0-2.0502.51491.3.92.ari
>> atp/1.7.3
>> PrgEnv-gnu/5.2.25
>> cmake/2.8.11.2
>> cray-hdf5-parallel/1.8.13
>> mercurial/2.7.1
>>
>> >git clone https://bitbucket.org/petsc/petsc petsc.0c8c14c5
>> cd petsc.0c8c14c5
>> git checkout 0c8c14c5
>>
>>
>> >cat config/configure-edison-gnu-4.9.0-debug.py
>> #!/usr/bin/env python
>> if __name__ == '__main__':
>>   import sys
>>   import os
>>   sys.path.insert(0, os.path.abspath('config'))
>>   import configure
>>   configure_options = [
>>      '--with-cc=cc',
>>      '--with-cxx=CC',
>>      '--with-fc=ftn',
>>      '--with-ld=cc',
>>      '--with-cpp=cpp',
>>      '--with-shared-libraries=0',
>>      '--with-gnu-compilers=0',
>>      '--with-debugging=0',
>>      '--with-clanguage=c',
>>      '--with-x=0',
>>      '--with-clib-autodetect=0',
>>      '--with-fortranlib-autodetect=0',
>>      '--with-cxxlib-autodetect=0',
>>      '--COPTFLAGS="-O3 -msse3 -fPIC"',
>>      '--FOPTFLAGS="-O3 -msse3 -fPIC"',
>>      '--download-parmetis=1',
>>      '--download-metis=1',
>>      '--with-hdf5=1',
>>      '--with-hdf5-dir=/opt/cray/hdf5-parallel/1.8.13/GNU/49',
>>      '--with-mpi-dir=/opt/cray/mpt/7.0.0/gni/mpich2-gnu/49',
>>      '--with-c2html=0',
>>      '--PETSC_ARCH=edison-gnu-4.9.0-debug',
>>   ]
>>   configure.petsc_configure(configure_options)
>>
>>  Any ideas what is wrong?
>>
>> Thanks
>> -Gautam.
>>
>>
>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which their
> experiments lead.
> -- Norbert Wiener
>
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