<div dir="ltr"><div>Matt,</div><div><br></div>I'm using a particular changeset of petsc-dev (<span style="font-family:arial,sans-serif;font-size:13px">git checkout 0c8c14c5) because PFLOTRAN is relying on that particular changeset. Can you point to the changset that this was fixed in petsc-dev? Btw, is this issue fixed in petsc release 3.5.1?</span><div>
<span style="font-family:arial,sans-serif;font-size:13px"><br></span></div><div><font face="arial, sans-serif">-Gautam.</font></div></div><div class="gmail_extra"><br><br><div class="gmail_quote">On Fri, Aug 1, 2014 at 2:13 PM, Matthew Knepley <span dir="ltr"><<a href="mailto:knepley@gmail.com" target="_blank">knepley@gmail.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div class="gmail_extra"><div class="gmail_quote"><div class="">On Fri, Aug 1, 2014 at 4:06 PM, Gautam Bisht <span dir="ltr"><<a href="mailto:gbisht@lbl.gov" target="_blank">gbisht@lbl.gov</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div dir="ltr"><div>Hi,</div><div><br></div><div>I'm getting an error while trying to install petsc-dev on Edison with GUN compilers. Attached below is configure.log and additional command line outputs.</div></div></blockquote>
<div><br></div></div><div>Satish fixed this. Did you pull?</div><div><br></div><div> Thanks,</div><div><br></div><div> Matt</div><div><div class="h5"><div> </div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div dir="ltr">
<div><br></div><div>> module list -t</div><div>Currently Loaded Modulefiles:</div><div>modules/<a href="http://3.2.6.7" target="_blank">3.2.6.7</a></div><div>nsg/1.2.0</div><div>eswrap/1.1.0-1.020200.1130.0</div><div>
switch/1.0-1.0502.51632.2.84.ari</div>
<div>craype-network-aries</div><div>craype/2.1.2</div><div>craype-ivybridge</div><div>cray-shmem/7.0.0</div><div>cray-mpich/7.0.0</div><div>torque/4.2.7</div><div>moab/7.2.7-e7c070d1-b3-SUSE11</div><div>altd/1.0</div><div>
darshan/2.3.0</div><div>usg-default-modules/1.1</div><div>gcc/4.9.0</div><div>cray-libsci/13.0.0</div><div>udreg/2.3.2-1.0502.8763.1.11.ari</div><div>ugni/5.0-1.0502.9037.7.26.ari</div><div>pmi/5.0.4-1.0000.10161.132.4.ari</div>
<div>dmapp/7.0.1-1.0502.9080.9.32.ari</div><div>gni-headers/3.0-1.0502.9038.7.4.ari</div><div>xpmem/0.1-2.0502.51169.1.11.ari</div><div>job/1.5.5-0.1_2.0502.52111.3.39.ari</div><div>csa/3.0.0-1_2.0502.51200.1.108.ari</div>
<div>alps/5.2.1-2.0502.8712.10.32.ari</div><div>rca/1.0.0-2.0502.51491.3.92.ari</div><div>atp/1.7.3</div><div>PrgEnv-gnu/5.2.25</div><div>cmake/<a href="http://2.8.11.2" target="_blank">2.8.11.2</a></div><div>cray-hdf5-parallel/1.8.13</div>
<div>mercurial/2.7.1</div><div><br></div><div>>git clone <a href="https://bitbucket.org/petsc/petsc" target="_blank">https://bitbucket.org/petsc/petsc</a> petsc.0c8c14c5</div><div>cd petsc.0c8c14c5</div><div>git checkout 0c8c14c5</div>
<div><br></div><div><br></div><div>>cat config/<a href="http://configure-edison-gnu-4.9.0-debug.py" target="_blank">configure-edison-gnu-4.9.0-debug.py</a> </div><div>#!/usr/bin/env python</div><div>if __name__ == '__main__':</div>
<div> import sys</div><div> import os</div><div> sys.path.insert(0, os.path.abspath('config'))</div><div> import configure</div><div> configure_options = [</div><div> '--with-cc=cc',</div><div> '--with-cxx=CC',</div>
<div> '--with-fc=ftn',</div><div> '--with-ld=cc',</div><div> '--with-cpp=cpp',</div><div> '--with-shared-libraries=0',</div><div> '--with-gnu-compilers=0',</div>
<div> '--with-debugging=0',</div><div> '--with-clanguage=c',</div><div> '--with-x=0',</div><div> '--with-clib-autodetect=0',</div><div> '--with-fortranlib-autodetect=0',</div>
<div> '--with-cxxlib-autodetect=0',</div><div> '--COPTFLAGS="-O3 -msse3 -fPIC"',</div><div> '--FOPTFLAGS="-O3 -msse3 -fPIC"',</div><div> '--download-parmetis=1',</div>
<div> '--download-metis=1',</div><div> '--with-hdf5=1',</div><div> '--with-hdf5-dir=/opt/cray/hdf5-parallel/1.8.13/GNU/49',</div><div> '--with-mpi-dir=/opt/cray/mpt/7.0.0/gni/mpich2-gnu/49',</div>
<div> '--with-c2html=0',</div><div> '--PETSC_ARCH=edison-gnu-4.9.0-debug',</div><div> ]</div><div> configure.petsc_configure(configure_options)</div><div><br></div><div><div> Any ideas what is wrong?<br>
</div><div><br></div><div>Thanks</div><span><font color="#888888"><div>-Gautam.</div></font></span></div><div><br></div></div>
</blockquote></div></div></div><span class="HOEnZb"><font color="#888888"><br><br clear="all"><div><br></div>-- <br>What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead.<br>
-- Norbert Wiener
</font></span></div></div>
</blockquote></div><br></div>