error with --enable-shared
Laura Fowler
ldfowler58 at icloud.com
Sat Oct 5 08:46:52 CDT 2019
Hi Wei-Keng:
Many thanks for replying so quickly to my e-mail. I really appreciate it as I have a few deadlines coming up this month. I rebuilt pnetcdf using the debug mode from scratch, following your suggestions. I am attaching to the config.log file and the output from running large_files. I do see an error in the output large_files.out (line 455).
Regard,
Laura
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> On Oct 4, 2019, at 11:08 AM, Wei-keng Liao <wkliao at eecs.northwestern.edu> wrote:
>
> Hi Laura
>
> I tried the failed test program ?large_files? on a Mac, but
> could not reproduce the error you encountered.
>
> In order to get more information about the error, could you
> rebuild PnetCDF in debug mode, by adding the configure
> option '--enable-debug?. For example,
>
> make -s distclean
> ./../pnetcdf-1.11.2/configure \
> --prefix=/Users/LauraLaptop/InstalledSoftwares/pnetcdf-1.11.2.gfortran-8.3 \
> --enable-shared --enable-large-file-test --enable-debug
> make -s -j4
> cd test/largefile
> make large_files
>
> setenv PNETCDF_VERBOSE_DEBUG_MODE 1
> ./large_files
>
> This should print the location of the error.
> Please send me the output. Thanks.
>
> Wei-keng
>
>> On Oct 3, 2019, at 5:38 PM, Laura Fowler via parallel-netcdf <parallel-netcdf at lists.mcs.anl.gov> wrote:
>>
>> Hello:
>>
>> I would like to compile pnetcdf-1.11.2 on my MacBook Pro (macOS Mojave 10.14.6) with the following options:
>>
>> setenv CC mpicc
>> setenv CXX mpic++
>> setenv F77 mpif77
>> setenv FC mpif90
>>
>> From my ?install? directory, I used the following configure options:
>> ./../pnetcdf-1.11.2/configure --prefix=/Users/LauraLaptop/InstalledSoftwares/pnetcdf-1.11.2.gfortran-8.3 --enable-shared --enable-large-file-test
>>
>> (see attached config.log).
>>
>> <config.log>
>>
>> I got the following error message with ?make check?:
>>
>> /Applications/Xcode.app/Contents/Developer/usr/bin/make check-TESTS
>> FAIL: large_files
>> PASS: large_var
>> PASS: large_dims_vars_attrs
>> PASS: high_dim_var
>> PASS: tst_cdf5_begin
>> PASS: large_coalesce
>> PASS: bigrecords
>> PASS: tst_flarge
>> ============================================================================
>> Testsuite summary for PnetCDF 1.11.2
>> ============================================================================
>> # TOTAL: 8
>> # PASS: 7
>> # SKIP: 0
>> # XFAIL: 0
>> # FAIL: 1
>> # XPASS: 0
>> # ERROR: 0
>> ============================================================================
>> See test/largefile/test-suite.log
>> Please report to parallel-netcdf at mcs.anl.gov
>> ============================================================================
>>
>>
>> (see attached test-suite.log).
>>
>> <test-suite.log>
>>
>> I would really appreciate if you were able to help solve this issue. Thank you.
>>
>>
>> Regards,
>> Laura Fowler
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>
>>
>
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