[mpich-discuss] make fails with undefined reference VALGRIND_CHECK_MEM_IS_ADDRESSABLE

[Dave Goodell]

That sounds like an unrelated issue.  Can you slap strace on there and see what file open is failing to open?

-Dave

On May 18, 2010, at 1:40 PM, Wei-keng Liao wrote:

> Hi, Dave,
> 
> I tried your approach by removing "meminit" from "--enable-g" and deleting lines 25-35 of "src/include/mpiu_valgrind.h", but got the following errors when ran a simple hello program.
> 
> I am using "--enable-g=dbg".
> 
> % mpiexec -l -n 4 hello
> 3: Fatal error in MPI_Init: Other MPI error, error stack:
> 3: MPIR_Init_thread(394).................: Initialization failed
> 3: MPID_Init(135)........................: channel initialization failed
> 3: MPIDI_CH3_Init(43)....................:
> 3: MPID_nem_init(202)....................:
> 3: MPIDI_CH3I_Seg_commit(366)............:
> 3: MPIU_SHMW_Hnd_deserialize(358)........:
> 3: MPIU_SHMW_Seg_open(897)...............:
> 3: MPIU_SHMW_Seg_create_attach_templ(671): open failed - No such file or directory
> rank 3 in job 9  aum0.cse.psu.edu_33436   caused collective abort of all ranks
>  exit status of rank 3: return code 1
> 
> 
> 
> Wei-keng
> 
> On May 18, 2010, at 12:31 PM, Dave Goodell wrote:
> 
>> Yeah, that's the reason.  I'll make some adjustments to the build system to handle this.
>> 
>> -Dave
>> 
>> On May 18, 2010, at 11:50 AM, Wei-keng Liao wrote:
>> 
>>> It is valgrind-2.4.0
>>> 
>>> Wei-keng
>>> 
>>> On May 18, 2010, at 11:45 AM, Anthony Chan wrote:
>>> 
>>>> 
>>>> How about "valgrind --version" ?
>>>> 
>>>> ----- "Wei-keng Liao" <wkliao at ece.northwestern.edu> wrote:
>>>> 
>>>>> I checked valgrind.h on my system, but do not know how to tell the
>>>>> valgrind version. Let me know if you have an idea.
>>>>> 
>>>>> 
>>>>> Wei-keng
>>>>> 
>>>>> On May 18, 2010, at 10:51 AM, Dave Goodell wrote:
>>>>> 
>>>>>> What version of valgrind do you have installed?
>>>>>> 
>>>>>> I suspect that your version of valgrind is older than anything that
>>>>> 
>>>>>> we've tested with and is slipping between the gap of "is valgrind.h
>>>>> 
>>>>>> available" and "does valgrind.h work".  I can strengthen the
>>>>>> configure test if I have an idea of what version of valgrind you
>>>>> have.
>>>>>> 
>>>>>> In the interim, the best workaround for you is probably to either
>>>>>> remove "meminit" from your "--enable-g" arg, hack up the configure
>>>>> 
>>>>>> tests for valgrind so that they always fail, or delete lines 25-35
>>>>> 
>>>>>> of "src/include/mpiu_valgrind.h".
>>>>>> 
>>>>>> -Dave
>>>>>> 
>>>>>> On May 18, 2010, at 10:38 AM, Wei-keng Liao wrote:
>>>>>> 
>>>>>>> 
>>>>>>> When running make of mpich2-1.2.1p1, I got an error complaining
>>>>>>> undefined reference to VALGRIND_CHECK_MEM_IS_ADDRESSABLE. Please
>>>>>>> see the attached standard outputs from configure and make.
>>>>>>> The configure command and environment variables used are also given
>>>>> 
>>>>>>> in out.configure file.
>>>>>>> 
>>>>>>> I am using GNU compilers, gcc and gfortran, to build MPICH2.
>>>>>>> 
>>>>>>> gcc version 4.0.2 20051125 (Red Hat 4.0.2-8)
>>>>>>> 
>>>>>>> % rpm -q glibc
>>>>>>> glibc-2.3.6-3
>>>>>>> 
>>>>>>> % uname -a
>>>>>>> Linux 2.6.17-1.2142_FC4smp #1 SMP Tue Jul 11 22:57:02 EDT 2006 i686
>>>>> 
>>>>>>> athlon i386 GNU/Linux
>>>>>>> 
>>>>>>> 
>>>>>>> Wei-keng
>>>>>>> 
>>>>>>> <out.configure><out.make>
>>>>>>> 
>>>>>>> 
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>>>>> 
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