[MOAB-dev] failing configure (netcdf++ and hdf5)
Lukasz Kaczmarczyk
likask at civil.gla.ac.uk
Thu Jul 23 14:13:20 CDT 2009
Hello
I spotted problem with netcdf++ and hdf5 configure. My version netcdf+
+ has to be linked with hdf5 libraries. I have temporary solution, I
set LDFLAGS="-L/Users/likask/MyBuild/hdf5-1.8.3_darwin/lib -lhdf5_hl -
lhdf5 -lz"
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by MOAB configure 3.99, which was
generated by GNU Autoconf 2.63. Invocation command line was
$ ./configure CFLAGS=-g -O0 CXXFLAGS=-g -O0 CC=mpicc CXX=mpicxx
F77=mpif77 FC=mpif77 --prefix=/Users/likask/MyBuild/moab-svn_darwin --
with-hdf5=/Users/likask/MyBuild/hdf5-1.8.3_darwin --with-netcdf=/Users/
likask/MyBuild/netcdf-4.0.1_darwin --with-zoltan=/Users/likask/MyBuild/
Zoltan_v3.1_darwin --with-parmetis=/Users/likask/MyBuild/src/
ParMetis-3.1.1 --with-mpi=/Users/likask/MyBuild/openmpi-1.3.2_darwin --
enable-mbzoltan --enable-imesh=nofortran --no-create
## --------- ##
## Platform. ##
## --------- ##
hostname = mackiss
uname -m = i386
uname -r = 9.7.0
uname -s = Darwin
uname -v = Darwin Kernel Version 9.7.0: Tue Mar 31 22:52:17 PDT 2009;
root:xnu-1228.12.14~1/RELEASE_I386
/usr/bin/uname -p = i386
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = Mach kernel version:
Darwin Kernel Version 9.7.0: Tue Mar 31 22:52:17 PDT 2009;
root:xnu-1228.12.14~1/RELEASE_I386
Kernel configured for up to 2 processors.
2 processors are physically available.
2 processors are logically available.
Processor type: i486 (Intel 80486)
Processors active: 0 1
Primary memory available: 2.00 gigabytes
Default processor set: 66 tasks, 329 threads, 2 processors
Load average: 0.98, Mach factor: 1.30
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /Library/Frameworks/Python.framework/Versions/Current/bin
PATH: /Users/likask/MyBuild/openmpi-1.3.2_darwin/bin
PATH: /opt/toolworks/totalview.8.6.0-3/bin
PATH: /opt/intel/idbe/10.1.017/bin
PATH: /opt/intel/fc/10.1.017/bin
PATH: /opt/intel/cc/10.1.015/bin
PATH: /Users/likask/MyBuild/src/YaFFEMS/bin
PATH: /Users/likask/MyBuild/bin
PATH: /opt/local/dx/bin
PATH: /opt/local/dx/bin_macos
PATH: /opt/local/bin
PATH: /opt/local/sbin
PATH: /usr/bin
PATH: /bin
PATH: /usr/sbin
PATH: /sbin
PATH: /usr/local/bin
PATH: /usr/texbin
PATH: /usr/X11/bin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:2324: checking build system type
configure:2342: result: i386-apple-darwin9.7.0
configure:2364: checking host system type
configure:2379: result: i386-apple-darwin9.7.0
configure:2401: checking target system type
configure:2416: result: i386-apple-darwin9.7.0
configure:2460: checking for a BSD-compatible install
configure:2528: result: /opt/local/bin/ginstall -c
configure:2539: checking whether build environment is sane
configure:2582: result: yes
configure:2607: checking for a thread-safe mkdir -p
configure:2646: result: /opt/local/bin/gmkdir -p
configure:2659: checking for gawk
configure:2675: found /opt/local/bin/gawk
configure:2686: result: gawk
configure:2697: checking whether make sets $(MAKE)
configure:2719: result: yes
configure:2906: checking for sed
configure:2922: found /usr/bin/sed
configure:2934: result: sed
configure:2973: checking if iMesh support is to be built
configure:2975: result: yes
configure:3004: checking for style of include used by make
configure:3032: result: GNU
configure:3258: checking for C compiler version
configure:3266: mpicc --version >&5
i686-apple-darwin9-gcc-4.0.1 (GCC) 4.0.1 (Apple Inc. build 5493)
Copyright (C) 2005 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There
is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE.
configure:3270: $? = 0
configure:3277: mpicc -v >&5
Using built-in specs.
Target: i686-apple-darwin9
Configured with: /var/tmp/gcc/gcc-5493~1/src/configure --disable-
checking -enable-werror --prefix=/usr --mandir=/share/man --enable-
languages=c,objc,c++,obj-c++ --program-transform-name=/^[cg][^.-]*$/s/
$/-4.0/ --with-gxx-include-dir=/include/c++/4.0.0 --with-slibdir=/usr/
lib --build=i686-apple-darwin9 --with-arch=apple --with-tune=generic --
host=i686-apple-darwin9 --target=i686-apple-darwin9
Thread model: posix
gcc version 4.0.1 (Apple Inc. build 5493)
configure:3281: $? = 0
configure:3288: mpicc -V >&5
gcc-4.0: argument to `-V' is missing
configure:3292: $? = 1
configure:3315: checking for C compiler default output file name
configure:3337: mpicc -g -O0 conftest.c >&5
configure:3341: $? = 0
configure:3379: result: a.out
configure:3398: checking whether the C compiler works
configure:3408: ./a.out
configure:3412: $? = 0
configure:3431: result: yes
configure:3438: checking whether we are cross compiling
configure:3440: result: no
configure:3443: checking for suffix of executables
configure:3450: mpicc -o conftest -g -O0 conftest.c >&5
configure:3454: $? = 0
configure:3480: result:
configure:3486: checking for suffix of object files
configure:3512: mpicc -c -g -O0 conftest.c >&5
configure:3516: $? = 0
configure:3541: result: o
configure:3545: checking whether we are using the GNU C compiler
configure:3574: mpicc -c -g -O0 conftest.c >&5
configure:3581: $? = 0
configure:3598: result: yes
configure:3607: checking whether mpicc accepts -g
configure:3637: mpicc -c -g conftest.c >&5
configure:3644: $? = 0
configure:3745: result: yes
configure:3762: checking for mpicc option to accept ISO C89
configure:3836: mpicc -c -g -O0 conftest.c >&5
configure:3843: $? = 0
configure:3866: result: none needed
configure:3886: checking dependency style of mpicc
configure:3977: result: gcc3
configure:3997: checking for known C compilers
configure:4822: result: GNU
configure:4830: checking for known compiler/OS combinations
configure:4891: result: GNU:i386
configure:4900: checking how to run the C preprocessor
configure:4940: mpicc -E conftest.c
configure:4947: $? = 0
configure:4978: mpicc -E conftest.c
conftest.c:10:28: error: ac_nonexistent.h: No such file or directory
configure:4985: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:5018: result: mpicc -E
configure:5047: mpicc -E conftest.c
configure:5054: $? = 0
configure:5085: mpicc -E conftest.c
conftest.c:10:28: error: ac_nonexistent.h: No such file or directory
configure:5092: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:5244: checking for C++ compiler version
configure:5252: mpicxx --version >&5
i686-apple-darwin9-g++-4.0.1 (GCC) 4.0.1 (Apple Inc. build 5493)
Copyright (C) 2005 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There
is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE.
configure:5256: $? = 0
configure:5263: mpicxx -v >&5
Using built-in specs.
Target: i686-apple-darwin9
Configured with: /var/tmp/gcc/gcc-5493~1/src/configure --disable-
checking -enable-werror --prefix=/usr --mandir=/share/man --enable-
languages=c,objc,c++,obj-c++ --program-transform-name=/^[cg][^.-]*$/s/
$/-4.0/ --with-gxx-include-dir=/include/c++/4.0.0 --with-slibdir=/usr/
lib --build=i686-apple-darwin9 --with-arch=apple --with-tune=generic --
host=i686-apple-darwin9 --target=i686-apple-darwin9
Thread model: posix
gcc version 4.0.1 (Apple Inc. build 5493)
configure:5267: $? = 0
configure:5274: mpicxx -V >&5
g++-4.0: argument to `-V' is missing
configure:5278: $? = 1
configure:5281: checking whether we are using the GNU C++ compiler
configure:5310: mpicxx -c -g -O0 conftest.cpp >&5
configure:5317: $? = 0
configure:5334: result: yes
configure:5343: checking whether mpicxx accepts -g
configure:5373: mpicxx -c -g conftest.cpp >&5
configure:5380: $? = 0
configure:5481: result: yes
configure:5506: checking dependency style of mpicxx
configure:5597: result: gcc3
configure:5617: checking how to run the C++ preprocessor
configure:5653: mpicxx -E conftest.cpp
configure:5660: $? = 0
configure:5691: mpicxx -E conftest.cpp
conftest.cpp:10:28: error: ac_nonexistent.h: No such file or directory
configure:5698: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:5731: result: mpicxx -E
configure:5760: mpicxx -E conftest.cpp
configure:5767: $? = 0
configure:5798: mpicxx -E conftest.cpp
conftest.cpp:10:28: error: ac_nonexistent.h: No such file or directory
configure:5805: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:5848: checking for known c++ compilers
configure:6639: result: GNU
configure:6647: checking for known compiler/OS combinations
configure:6709: result: GNU:i386
configure:7374: checking whether ln -s works
configure:7378: result: yes
configure:7385: checking whether make sets $(MAKE)
configure:7407: result: yes
configure:7472: checking for a sed that does not truncate output
configure:7538: result: sed
configure:7556: checking for grep that handles long lines and -e
configure:7616: result: /usr/bin/grep
configure:7621: checking for egrep
configure:7685: result: /usr/bin/grep -E
configure:7690: checking for fgrep
configure:7754: result: /usr/bin/grep -F
configure:7789: checking for ld used by mpicc
configure:7856: result: /usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld
configure:7865: checking if the linker (/usr/libexec/gcc/i686-apple-
darwin9/4.0.1/ld) is GNU ld
configure:7880: result: no
configure:7892: checking for BSD- or MS-compatible name lister (nm)
configure:7941: result: /usr/bin/nm -p
configure:8059: checking the name lister (/usr/bin/nm -p) interface
configure:8066: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:8069: /usr/bin/nm -p "conftest.o"
configure:8072: output
0000016c D _some_variable
configure:8079: result: BSD nm
configure:8083: checking the maximum length of command line arguments
configure:8203: result: 196608
configure:8220: checking whether the shell understands some XSI
constructs
configure:8230: result: yes
configure:8234: checking whether the shell understands "+="
configure:8240: result: yes
configure:8275: checking for /usr/libexec/gcc/i686-apple-darwin9/4.0.1/
ld option to reload object files
configure:8282: result: -r
configure:8351: checking for objdump
configure:8381: result: no
configure:8410: checking how to recognize dependent libraries
configure:8606: result: pass_all
configure:8666: checking for ar
configure:8682: found /usr/bin/ar
configure:8693: result: ar
configure:8771: checking for strip
configure:8787: found /usr/bin/strip
configure:8798: result: strip
configure:8870: checking for ranlib
configure:8886: found /usr/bin/ranlib
configure:8897: result: ranlib
configure:8987: checking command to parse /usr/bin/nm -p output from
mpicc object
configure:9105: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:9108: $? = 0
configure:9112: /usr/bin/nm -p conftest.o \| sed -n -e 's/^.*[ ]\
([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/
p' \> conftest.nm
configure:9115: $? = 0
cannot find nm_test_var in conftest.nm
configure:9105: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:9108: $? = 0
configure:9112: /usr/bin/nm -p conftest.o \| sed -n -e 's/^.*[ ]\
([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2
\2/p' \> conftest.nm
configure:9115: $? = 0
configure:9169: mpicc -o conftest -g -O0 -Wall -pipe conftest.c
conftstm.o >&5
configure:9172: $? = 0
configure:9210: result: ok
configure:9503: checking for dsymutil
configure:9519: found /usr/bin/dsymutil
configure:9530: result: dsymutil
configure:9595: checking for nmedit
configure:9611: found /usr/bin/nmedit
configure:9622: result: nmedit
configure:9687: checking for lipo
configure:9703: found /usr/bin/lipo
configure:9714: result: lipo
configure:9779: checking for otool
configure:9795: found /usr/bin/otool
configure:9806: result: otool
configure:9871: checking for otool64
configure:9901: result: no
configure:9946: checking for -single_module linker flag
mpicc -g -O0 -Wall -pipe -o libconftest.dylib -dynamiclib -Wl,-
single_module conftest.c
configure:9973: result: yes
configure:9975: checking for -exported_symbols_list linker flag
configure:10005: mpicc -o conftest -g -O0 -Wall -pipe -Wl,-
exported_symbols_list,conftest.sym conftest.c -lm >&5
configure:10012: $? = 0
configure:10034: result: yes
configure:10072: checking for ANSI C header files
configure:10102: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:10109: $? = 0
configure:10208: mpicc -o conftest -g -O0 -Wall -pipe conftest.c -lm
>&5
configure:10212: $? = 0
configure:10218: ./conftest
configure:10222: $? = 0
configure:10240: result: yes
configure:10264: checking for sys/types.h
configure:10285: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:10292: $? = 0
configure:10309: result: yes
configure:10264: checking for sys/stat.h
configure:10285: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:10292: $? = 0
configure:10309: result: yes
configure:10264: checking for stdlib.h
configure:10285: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:10292: $? = 0
configure:10309: result: yes
configure:10264: checking for string.h
configure:10285: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:10292: $? = 0
configure:10309: result: yes
configure:10264: checking for memory.h
configure:10285: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:10292: $? = 0
configure:10309: result: yes
configure:10264: checking for strings.h
configure:10285: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:10292: $? = 0
configure:10309: result: yes
configure:10264: checking for inttypes.h
configure:10285: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:10292: $? = 0
configure:10309: result: yes
configure:10264: checking for stdint.h
configure:10285: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:10292: $? = 0
configure:10309: result: yes
configure:10264: checking for unistd.h
configure:10285: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:10292: $? = 0
configure:10309: result: yes
configure:10327: checking for dlfcn.h
configure:10348: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:10355: $? = 0
configure:10372: result: yes
configure:10499: checking for C++ compiler version
configure:10507: mpicxx --version >&5
i686-apple-darwin9-g++-4.0.1 (GCC) 4.0.1 (Apple Inc. build 5493)
Copyright (C) 2005 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There
is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE.
configure:10511: $? = 0
configure:10518: mpicxx -v >&5
Using built-in specs.
Target: i686-apple-darwin9
Configured with: /var/tmp/gcc/gcc-5493~1/src/configure --disable-
checking -enable-werror --prefix=/usr --mandir=/share/man --enable-
languages=c,objc,c++,obj-c++ --program-transform-name=/^[cg][^.-]*$/s/
$/-4.0/ --with-gxx-include-dir=/include/c++/4.0.0 --with-slibdir=/usr/
lib --build=i686-apple-darwin9 --with-arch=apple --with-tune=generic --
host=i686-apple-darwin9 --target=i686-apple-darwin9
Thread model: posix
gcc version 4.0.1 (Apple Inc. build 5493)
configure:10522: $? = 0
configure:10529: mpicxx -V >&5
g++-4.0: argument to `-V' is missing
configure:10533: $? = 1
configure:10536: checking whether we are using the GNU C++ compiler
configure:10589: result: yes
configure:10598: checking whether mpicxx accepts -g
configure:10736: result: yes
configure:10761: checking dependency style of mpicxx
configure:10852: result: gcc3
configure:10875: checking how to run the C++ preprocessor
configure:10989: result: mpicxx -E
configure:11018: mpicxx -E conftest.cpp
configure:11025: $? = 0
configure:11056: mpicxx -E conftest.cpp
conftest.cpp:21:28: error: ac_nonexistent.h: No such file or directory
configure:11063: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:11211: checking for Fortran 77 compiler version
configure:11219: mpif77 --version >&5
GNU Fortran (GCC) 4.3.0 20070810 (experimental)
Copyright (C) 2007 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:11223: $? = 0
configure:11230: mpif77 -v >&5
Using built-in specs.
Target: i386-apple-darwin8.10.1
Configured with: ../gcc-4.3-20070810/configure --enable-threads=posix
--enable-languages=fortran
Thread model: posix
gcc version 4.3.0 20070810 (experimental)
configure:11234: $? = 0
configure:11241: mpif77 -V >&5
gfortran: '-V' option must have argument
configure:11245: $? = 1
configure:11253: checking whether we are using the GNU Fortran 77
compiler
configure:11272: mpif77 -c conftest.F >&5
configure:11279: $? = 0
configure:11296: result: yes
configure:11302: checking whether mpif77 accepts -g
configure:11319: mpif77 -c -g conftest.f >&5
configure:11326: $? = 0
configure:11342: result: yes
configure:11485: checking for Fortran compiler version
configure:11493: mpif77 --version >&5
GNU Fortran (GCC) 4.3.0 20070810 (experimental)
Copyright (C) 2007 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:11497: $? = 0
configure:11504: mpif77 -v >&5
Using built-in specs.
Target: i386-apple-darwin8.10.1
Configured with: ../gcc-4.3-20070810/configure --enable-threads=posix
--enable-languages=fortran
Thread model: posix
gcc version 4.3.0 20070810 (experimental)
configure:11508: $? = 0
configure:11515: mpif77 -V >&5
gfortran: '-V' option must have argument
configure:11519: $? = 1
configure:11527: checking whether we are using the GNU Fortran compiler
configure:11546: mpif77 -c -O2 -DNDEBUG conftest.F >&5
configure:11553: $? = 0
configure:11570: result: yes
configure:11576: checking whether mpif77 accepts -g
configure:11593: mpif77 -c -g conftest.f >&5
configure:11600: $? = 0
configure:11616: result: yes
configure:11789: checking for objdir
configure:11804: result: .libs
configure:12100: checking if mpicc supports -fno-rtti -fno-exceptions
configure:12118: mpicc -c -g -O0 -Wall -pipe -fno-rtti -fno-
exceptions conftest.c >&5
cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++
but not for C
configure:12122: $? = 0
configure:12135: result: no
configure:12155: checking for mpicc option to produce PIC
configure:12427: result: -fno-common -DPIC
configure:12439: checking if mpicc PIC flag -fno-common -DPIC works
configure:12457: mpicc -c -g -O0 -Wall -pipe -fno-common -DPIC -DPIC
conftest.c >&5
configure:12461: $? = 0
configure:12474: result: yes
configure:12498: checking if mpicc static flag -static works
configure:12526: result: no
configure:12541: checking if mpicc supports -c -o file.o
configure:12562: mpicc -c -g -O0 -Wall -pipe -o out/conftest2.o
conftest.c >&5
configure:12566: $? = 0
configure:12588: result: yes
configure:12596: checking if mpicc supports -c -o file.o
configure:12643: result: yes
configure:12676: checking whether the mpicc linker (/usr/libexec/gcc/
i686-apple-darwin9/4.0.1/ld) supports shared libraries
configure:13750: result: yes
configure:13989: checking dynamic linker characteristics
configure:14672: result: darwin9.7.0 dyld
configure:14774: checking how to hardcode library paths into programs
configure:14799: result: immediate
configure:15632: checking whether stripping libraries is possible
configure:15646: result: yes
configure:15672: checking if libtool supports shared libraries
configure:15674: result: yes
configure:15677: checking whether to build shared libraries
configure:15698: result: no
configure:15701: checking whether to build static libraries
configure:15705: result: yes
configure:15855: checking for ld used by mpicxx
configure:15922: result: /usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld
configure:15931: checking if the linker (/usr/libexec/gcc/i686-apple-
darwin9/4.0.1/ld) is GNU ld
configure:15946: result: no
configure:16001: checking whether the mpicxx linker (/usr/libexec/gcc/
i686-apple-darwin9/4.0.1/ld) supports shared libraries
configure:16976: result: yes
configure:17004: mpicxx -c -g -O0 -Wall -pipe conftest.cpp >&5
configure:17007: $? = 0
configure:17189: checking for mpicxx option to produce PIC
configure:17506: result: -fno-common -DPIC
configure:17515: checking if mpicxx PIC flag -fno-common -DPIC works
configure:17533: mpicxx -c -g -O0 -Wall -pipe -fno-common -DPIC -DPIC
conftest.cpp >&5
configure:17537: $? = 0
configure:17550: result: yes
configure:17571: checking if mpicxx static flag -static works
configure:17599: result: no
configure:17611: checking if mpicxx supports -c -o file.o
configure:17632: mpicxx -c -g -O0 -Wall -pipe -o out/conftest2.o
conftest.cpp >&5
configure:17636: $? = 0
configure:17658: result: yes
configure:17663: checking if mpicxx supports -c -o file.o
configure:17710: result: yes
configure:17740: checking whether the mpicxx linker (/usr/libexec/gcc/
i686-apple-darwin9/4.0.1/ld) supports shared libraries
configure:17766: result: yes
configure:17903: checking dynamic linker characteristics
configure:18534: result: darwin9.7.0 dyld
configure:18585: checking how to hardcode library paths into programs
configure:18610: result: immediate
configure:18751: checking if libtool supports shared libraries
configure:18753: result: yes
configure:18756: checking whether to build shared libraries
configure:18776: result: no
configure:18779: checking whether to build static libraries
configure:18783: result: yes
configure:18797: checking for mpif77 option to produce PIC
configure:19069: result: -fno-common
configure:19078: checking if mpif77 PIC flag -fno-common works
configure:19096: mpif77 -c -g -O2 -fno-common conftest.f >&5
configure:19100: $? = 0
configure:19113: result: yes
configure:19134: checking if mpif77 static flag -static works
configure:19162: result: no
configure:19174: checking if mpif77 supports -c -o file.o
configure:19195: mpif77 -c -g -O2 -o out/conftest2.o conftest.f >&5
configure:19199: $? = 0
configure:19221: result: yes
configure:19226: checking if mpif77 supports -c -o file.o
configure:19273: result: yes
configure:19303: checking whether the mpif77 linker (/usr/libexec/gcc/
i686-apple-darwin9/4.0.1/ld) supports shared libraries
configure:20357: result: yes
configure:20494: checking dynamic linker characteristics
configure:21115: result: darwin9.7.0 dyld
configure:21166: checking how to hardcode library paths into programs
configure:21191: result: immediate
configure:21327: checking if libtool supports shared libraries
configure:21329: result: yes
configure:21332: checking whether to build shared libraries
configure:21352: result: no
configure:21355: checking whether to build static libraries
configure:21359: result: yes
configure:21385: mpif77 -c -O2 -DNDEBUG conftest.f >&5
configure:21388: $? = 0
configure:21498: checking for mpif77 option to produce PIC
configure:21770: result: -fno-common
configure:21779: checking if mpif77 PIC flag -fno-common works
configure:21797: mpif77 -c -O2 -DNDEBUG -fno-common conftest.f >&5
configure:21801: $? = 0
configure:21814: result: yes
configure:21835: checking if mpif77 static flag -static works
configure:21863: result: no
configure:21875: checking if mpif77 supports -c -o file.o
configure:21896: mpif77 -c -O2 -DNDEBUG -o out/conftest2.o
conftest.f >&5
configure:21900: $? = 0
configure:21922: result: yes
configure:21927: checking if mpif77 supports -c -o file.o
configure:21974: result: yes
configure:22004: checking whether the mpif77 linker (/usr/libexec/gcc/
i686-apple-darwin9/4.0.1/ld) supports shared libraries
configure:23058: result: yes
configure:23195: checking dynamic linker characteristics
configure:23816: result: darwin9.7.0 dyld
configure:23867: checking how to hardcode library paths into programs
configure:23892: result: immediate
configure:23942: checking for gunzip
configure:23958: found /usr/bin/gunzip
configure:23969: result: gunzip -c
configure:23979: checking for gzip
configure:24006: result: gunzip -c
configure:24016: checking for zcat
configure:24043: result: gunzip -c
configure:24066: checking if C++ compiler supports template class
specialization
configure:24100: mpicxx -c -g -O0 -Wall -pipe conftest.cpp >&5
configure:24107: $? = 0
configure:24128: result: yes
configure:24138: checking if C++ compiler supports template function
specialization
configure:24173: mpicxx -c -g -O0 -Wall -pipe conftest.cpp >&5
configure:24180: $? = 0
configure:24201: result: yes
configure:25142: checking for inttypes.h
configure:25147: result: yes
configure:25278: checking for stdint.h
configure:25283: result: yes
configure:25414: checking for sys/types.h
configure:25419: result: yes
configure:25559: checking stddef.h usability
configure:25576: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:25583: $? = 0
configure:25597: result: yes
configure:25601: checking stddef.h presence
configure:25616: mpicc -E conftest.c
configure:25623: $? = 0
configure:25637: result: yes
configure:25665: checking for stddef.h
configure:25672: result: yes
configure:25686: checking for stdlib.h
configure:25691: result: yes
configure:26078: checking for size_t
configure:26114: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:26121: $? = 0
configure:26156: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
conftest.c: In function 'main':
conftest.c:75: error: syntax error before ')' token
conftest.c:79: warning: control reaches end of non-void function
configure:26163: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| if (sizeof ((size_t)))
| return 0;
| ;
| return 0;
| }
configure:26186: result: yes
configure:26200: checking for ptrdiff_t
configure:26236: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
configure:26243: $? = 0
configure:26278: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
conftest.c: In function 'main':
conftest.c:76: error: syntax error before ')' token
conftest.c:80: warning: control reaches end of non-void function
configure:26285: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| #define MOAB_HAVE_SIZE_T /**/
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| if (sizeof ((ptrdiff_t)))
| return 0;
| ;
| return 0;
| }
configure:26308: result: yes
configure:26337: checking ieeefp.h usability
configure:26354: mpicc -c -g -O0 -Wall -pipe conftest.c >&5
conftest.c:66:20: error: ieeefp.h: No such file or directory
configure:26361: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| #define MOAB_HAVE_SIZE_T /**/
| #define MOAB_HAVE_PTRDIFF_T /**/
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <ieeefp.h>
configure:26375: result: no
configure:26379: checking ieeefp.h presence
configure:26394: mpicc -E conftest.c
conftest.c:33:20: error: ieeefp.h: No such file or directory
configure:26401: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| #define MOAB_HAVE_SIZE_T /**/
| #define MOAB_HAVE_PTRDIFF_T /**/
| /* end confdefs.h. */
| #include <ieeefp.h>
configure:26415: result: no
configure:26443: checking for ieeefp.h
configure:26450: result: no
configure:26600: checking for C++ unordered_map
configure:26641: mpicxx -c -g -O0 -Wall -pipe conftest.cpp >&5
conftest.cpp:33:25: error: unordered_map: No such file or directory
conftest.cpp: In function 'int main()':
conftest.cpp:45: error: 'unordered_map' is not a member of 'std'
conftest.cpp:45: error: expected primary-expression before 'int'
conftest.cpp:45: error: expected `;' before 'int'
configure:26648: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| #define MOAB_HAVE_SIZE_T /**/
| #define MOAB_HAVE_PTRDIFF_T /**/
| /* end confdefs.h. */
| #include <unordered_map>
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| std::unordered_map<int,int> map
| ;
| return 0;
| }
configure:26692: mpicxx -c -g -O0 -Wall -pipe conftest.cpp >&5
configure:26699: $? = 0
configure:26773: result: std::tr1
configure:26803: checking mpi.h usability
configure:26820: mpicc -c -g -O0 -Wall -pipe -
DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map
conftest.c >&5
configure:26827: $? = 0
configure:26841: result: yes
configure:26845: checking mpi.h presence
configure:26860: mpicc -E -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map conftest.c
configure:26867: $? = 0
configure:26881: result: yes
configure:26909: checking for mpi.h
configure:26916: result: yes
configure:26929: checking If -DMPICH_IGNORE_CXX_SEEK is necessary
configure:26968: mpicxx -E -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map conftest.cpp
configure:26975: $? = 0
configure:26980: result: no
configure:27102: checking for mpiexec
configure:27118: found /Users/likask/MyBuild/openmpi-1.3.2_darwin/bin/
mpiexec
configure:27129: result: mpiexec
configure:27174: checking for python
configure:27190: found /Library/Frameworks/Python.framework/Versions/
Current/bin/python
configure:27201: result: python
configure:27211: checking if python works
configure:27216: result: yes
configure:27238: checking for location of python headers
configure:27244: result: /Library/Frameworks/Python.framework/Versions/
4.3.0/include/python2.5
configure:27276: checking pyconfig.h usability
configure:27293: mpicc -c -g -O0 -Wall -pipe -
DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -
IPYCONFIG_DIR -I/Library/Frameworks/Python.framework/Versions/4.3.0/
include/python2.5 conftest.c >&5
configure:27300: $? = 0
configure:27314: result: yes
configure:27318: checking pyconfig.h presence
configure:27333: mpicc -E -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map -IPYCONFIG_DIR -I/Library/
Frameworks/Python.framework/Versions/4.3.0/include/python2.5 conftest.c
configure:27340: $? = 0
configure:27354: result: yes
configure:27382: checking for pyconfig.h
configure:27389: result: yes
configure:27411: checking Python.h usability
configure:27428: mpicc -c -g -O0 -Wall -pipe -
DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -
IPYCONFIG_DIR -I/Library/Frameworks/Python.framework/Versions/4.3.0/
include/python2.5 conftest.c >&5
configure:27435: $? = 0
configure:27449: result: yes
configure:27453: checking Python.h presence
configure:27468: mpicc -E -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map -IPYCONFIG_DIR -I/Library/
Frameworks/Python.framework/Versions/4.3.0/include/python2.5 conftest.c
configure:27475: $? = 0
configure:27489: result: yes
configure:27517: checking for Python.h
configure:27524: result: yes
configure:27540: checking for NumPy module
configure:27545: result: yes
configure:27562: checking for location of NumPy includes
configure:27570: result: /Library/Frameworks/Python.framework/Versions/
4.3.0/lib/python2.5/site-packages/numpy-1.3.0n1-py2.5-macosx-10.3-
fat.egg/numpy/core/include
configure:27578: checking for numpy/arrayobject.h
configure:27599: mpicc -c -g -O0 -Wall -pipe -
DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -I/
Library/Frameworks/Python.framework/Versions/4.3.0/lib/python2.5/site-
packages/numpy-1.3.0n1-py2.5-macosx-10.3-fat.egg/numpy/core/include -
IPYCONFIG_DIR -I/Library/Frameworks/Python.framework/Versions/4.3.0/
include/python2.5 conftest.c >&5
/Library/Frameworks/Python.framework/Versions/4.3.0/lib/python2.5/site-
packages/numpy-1.3.0n1-py2.5-macosx-10.3-fat.egg/numpy/core/include/
numpy/__multiarray_api.h:969: warning: '_import_array' defined but not
used
configure:27606: $? = 0
configure:27621: result: yes
configure:27681: checking if Python support is to be built
configure:27683: result: no
configure:27727: checking for deflate in -lz
configure:27770: mpicc -o conftest -g -O0 -Wall -pipe -
DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map
conftest.c -lz -lm >&5
configure:27777: $? = 0
configure:27798: result: yes
configure:27838: checking for SZ_Decompress in -lsz
configure:27881: mpicc -o conftest -g -O0 -Wall -pipe -
DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map
conftest.c -lsz -lm >&5
ld: library not found for -lsz
collect2: ld returned 1 exit status
configure:27888: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| #define MOAB_HAVE_SIZE_T /**/
| #define MOAB_HAVE_PTRDIFF_T /**/
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char SZ_Decompress ();
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return SZ_Decompress ();
| ;
| return 0;
| }
configure:27909: result: no
configure:27951: checking if HDF5 support is enabled
configure:27967: result: yes
configure:27977: checking for gpfs_stat in -lgpfs
configure:28020: mpicc -o conftest -g -O0 -Wall -pipe -
DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map
conftest.c -lgpfs -lm >&5
ld: library not found for -lgpfs
collect2: ld returned 1 exit status
configure:28027: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| #define MOAB_HAVE_SIZE_T /**/
| #define MOAB_HAVE_PTRDIFF_T /**/
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char gpfs_stat ();
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return gpfs_stat ();
| ;
| return 0;
| }
configure:28048: result: no
configure:28108: checking hdf5.h usability
configure:28125: mpicc -c -g -O0 -Wall -pipe -I/Users/likask/MyBuild/
hdf5-1.8.3_darwin/include -isystem /Users/likask/MyBuild/
hdf5-1.8.3_darwin/include -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map conftest.c >&5
configure:28132: $? = 0
configure:28146: result: yes
configure:28150: checking hdf5.h presence
configure:28165: mpicc -E -I/Users/likask/MyBuild/hdf5-1.8.3_darwin/
include -isystem /Users/likask/MyBuild/hdf5-1.8.3_darwin/include -
DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map
conftest.c
configure:28172: $? = 0
configure:28186: result: yes
configure:28214: checking for hdf5.h
configure:28223: result: yes
configure:28243: checking for H5Fopen in -lhdf5
configure:28286: mpicc -o conftest -g -O0 -Wall -pipe -I/Users/likask/
MyBuild/hdf5-1.8.3_darwin/include -isystem /Users/likask/MyBuild/
hdf5-1.8.3_darwin/include -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map -L/Users/likask/MyBuild/
hdf5-1.8.3_darwin/lib conftest.c -lhdf5 -lm >&5
Undefined symbols:
"_inflateEnd", referenced from:
_H5Z_filter_deflate in libhdf5.a(H5Zdeflate.o)
_H5Z_filter_deflate in libhdf5.a(H5Zdeflate.o)
_H5Z_filter_deflate in libhdf5.a(H5Zdeflate.o)
"_inflateInit_", referenced from:
_H5Z_filter_deflate in libhdf5.a(H5Zdeflate.o)
"_compress2", referenced from:
_H5Z_filter_deflate in libhdf5.a(H5Zdeflate.o)
"_inflate", referenced from:
_H5Z_filter_deflate in libhdf5.a(H5Zdeflate.o)
ld: symbol(s) not found
collect2: ld returned 1 exit status
configure:28293: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| #define MOAB_HAVE_SIZE_T /**/
| #define MOAB_HAVE_PTRDIFF_T /**/
| #define HAVE_HDF5_H 1
| /* end confdefs.h. */
|
| /* Override any GCC internal prototype to avoid an error.
| Use char because int might match the return type of a GCC
| builtin and then its argument prototype would still apply. */
| #ifdef __cplusplus
| extern "C"
| #endif
| char H5Fopen ();
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| return H5Fopen ();
| ;
| return 0;
| }
configure:28316: result: no
configure:28329: checking for H5Fopen in -lhdf5
configure:28372: mpicc -o conftest -g -O0 -Wall -pipe -I/Users/likask/
MyBuild/hdf5-1.8.3_darwin/include -isystem /Users/likask/MyBuild/
hdf5-1.8.3_darwin/include -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map -L/Users/likask/MyBuild/
hdf5-1.8.3_darwin/lib conftest.c -lhdf5 -lz -lm >&5
configure:28379: $? = 0
configure:28402: result: yes
configure:28640: checking for H5Pset_fapl_mpio in -lhdf5
configure:28684: mpicc -o conftest -g -O0 -Wall -pipe -
DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -
L/Users/likask/MyBuild/hdf5-1.8.3_darwin/lib conftest.c -lhdf5 -lz -
lhdf5
-lm >&5
configure:28691: $? = 0
configure:28712: result: yes
configure:28742: checking if NetCDF support is enabled
configure:28759: result: yes
configure:28786: checking strstream.h usability
configure:28803: mpicxx -c -g -O0 -Wall -pipe -
DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map
conftest.cpp >&5
conftest.cpp:67:23: error: strstream.h: No such file or directory
configure:28810: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| #define MOAB_HAVE_SIZE_T /**/
| #define MOAB_HAVE_PTRDIFF_T /**/
| #define HAVE_HDF5_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <strstream.h>
configure:28824: result: no
configure:28828: checking strstream.h presence
configure:28843: mpicxx -E -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map conftest.cpp
conftest.cpp:34:23: error: strstream.h: No such file or directory
configure:28850: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| #define MOAB_HAVE_SIZE_T /**/
| #define MOAB_HAVE_PTRDIFF_T /**/
| #define HAVE_HDF5_H 1
| /* end confdefs.h. */
| #include <strstream.h>
configure:28864: result: no
configure:28892: checking for strstream.h
configure:28899: result: no
configure:28917: checking sstream.h usability
configure:28934: mpicxx -c -g -O0 -Wall -pipe -
DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map
conftest.cpp >&5
conftest.cpp:67:21: error: sstream.h: No such file or directory
configure:28941: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| #define MOAB_HAVE_SIZE_T /**/
| #define MOAB_HAVE_PTRDIFF_T /**/
| #define HAVE_HDF5_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <sstream.h>
configure:28955: result: no
configure:28959: checking sstream.h presence
configure:28974: mpicxx -E -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map conftest.cpp
conftest.cpp:34:21: error: sstream.h: No such file or directory
configure:28981: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| #define MOAB_HAVE_SIZE_T /**/
| #define MOAB_HAVE_PTRDIFF_T /**/
| #define HAVE_HDF5_H 1
| /* end confdefs.h. */
| #include <sstream.h>
configure:28995: result: no
configure:29023: checking for sstream.h
configure:29030: result: no
configure:29048: checking strstream usability
configure:29065: mpicxx -c -g -O0 -Wall -pipe -
DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map
conftest.cpp >&5
In file included from /usr/include/c++/4.0.0/backward/strstream:51,
from conftest.cpp:67:
/usr/include/c++/4.0.0/backward/backward_warning.h:32:2: warning:
#warning This file includes at least one deprecated or antiquated
header. Please consider using one of the 32 headers found in section
17.4.1.2 of the C++ standard. Examples include substituting the <X>
header for the <X.h> header for C++ includes, or <iostream> instead of
the deprecated header <iostream.h>. To disable this warning use -Wno-
deprecated.
configure:29072: $? = 0
configure:29086: result: yes
configure:29090: checking strstream presence
configure:29105: mpicxx -E -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map conftest.cpp
In file included from /usr/include/c++/4.0.0/backward/strstream:51,
from conftest.cpp:34:
/usr/include/c++/4.0.0/backward/backward_warning.h:32:2: warning:
#warning This file includes at least one deprecated or antiquated
header. Please consider using one of the 32 headers found in section
17.4.1.2 of the C++ standard. Examples include substituting the <X>
header for the <X.h> header for C++ includes, or <iostream> instead of
the deprecated header <iostream.h>. To disable this warning use -Wno-
deprecated.
configure:29112: $? = 0
configure:29126: result: yes
configure:29154: checking for strstream
configure:29161: result: yes
configure:29360: checking netcdf.h usability
configure:29377: mpicc -c -g -O0 -Wall -pipe -I/Users/likask/MyBuild/
netcdf-4.0.1_darwin/include -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map conftest.c >&5
configure:29384: $? = 0
configure:29398: result: yes
configure:29402: checking netcdf.h presence
configure:29417: mpicc -E -I/Users/likask/MyBuild/netcdf-4.0.1_darwin/
include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/
unordered_map conftest.c
configure:29424: $? = 0
configure:29438: result: yes
configure:29466: checking for netcdf.h
configure:29475: result: yes
configure:29493: checking for netcdf.hh
configure:29532: mpicxx -c -g -O0 -Wall -pipe -I/Users/likask/MyBuild/
netcdf-4.0.1_darwin/include -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map conftest.cpp >&5
configure:29539: $? = 0
configure:29604: result: yes
configure:29615: checking for netcdf_c++ library
configure:29648: mpicxx -o conftest -g -O0 -Wall -pipe -I/Users/likask/
MyBuild/netcdf-4.0.1_darwin/include -DUNORDERED_MAP_NS=std::tr1 -
DHAVE_UNORDERED_MAP=tr1/unordered_map -L/Users/likask/MyBuild/
netcdf-4.0.1_darwin/lib conftest.cpp -lm -lnetcdf_c++ -lnetcdf >&5
Undefined symbols:
"_H5Gget_objinfo", referenced from:
_dimscale_visitor in libnetcdf.a(nc4hdf.o)
_nc4_rec_match_dimscales in libnetcdf.a(nc4hdf.o)
"_H5Lget_name_by_idx", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_STD_I8LE_g", referenced from:
_H5T_STD_I8LE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5T_STD_I32BE_g", referenced from:
_H5T_STD_I32BE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Pcreate", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_open_file in libnetcdf.a(nc4file.o)
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pget_nfilters", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pclose", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_open_file in libnetcdf.a(nc4file.o)
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Awrite", referenced from:
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Gmove2", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Dread", referenced from:
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
"_H5T_IEEE_F32LE_g", referenced from:
_H5T_IEEE_F32LE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5T_STD_U16LE_g", referenced from:
_H5T_STD_U16LE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5P_CLS_GROUP_CREATE_g", referenced from:
_H5P_CLS_GROUP_CREATE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Sclose", referenced from:
_nc4_find_dim_len in libnetcdf.a(nc4internal.o)
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tclose", referenced from:
_type_list_del in libnetcdf.a(nc4internal.o)
_nc4_rec_grp_del in libnetcdf.a(nc4internal.o)
_nc4_rec_grp_del in libnetcdf.a(nc4internal.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_nc4_free_global_hdf_string_typeid in libnetcdf.a(nc4hdf.o)
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tget_array_dims1", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tvlen_create", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Dwrite", referenced from:
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
"_H5Tset_size", referenced from:
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
"_H5T_IEEE_F64BE_g", referenced from:
_H5T_IEEE_F64BE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Pget_filter2", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Gunlink", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Sget_simple_extent_type", referenced from:
_nc4_find_dim_len in libnetcdf.a(nc4internal.o)
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
"_H5T_NATIVE_INT_g", referenced from:
_H5T_NATIVE_INT_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Pset_fletcher32", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Sselect_hyperslab", referenced from:
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
"_H5T_NATIVE_ULLONG_g", referenced from:
_H5T_NATIVE_ULLONG_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Aget_space", referenced from:
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
"_H5T_STD_U8LE_g", referenced from:
_H5T_STD_U8LE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Tinsert", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pset_fclose_degree", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_open_file in libnetcdf.a(nc4file.o)
"_H5Dget_space", referenced from:
_nc4_find_dim_len in libnetcdf.a(nc4internal.o)
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_STD_I16LE_g", referenced from:
_H5T_STD_I16LE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Aopen_name", referenced from:
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tget_class", referenced from:
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Screate", referenced from:
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5close", referenced from:
_nc_close in libnetcdf.a(nc4file.o)
"_H5Fcreate", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
"_H5Pset_chunk", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_C_S1_g", referenced from:
_H5T_C_S1_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Pset_fill_value", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pset_link_creation_order", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tcreate", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_STD_U32LE_g", referenced from:
_H5T_STD_U32LE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Aget_type", referenced from:
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tget_member_type", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5P_CLS_FILE_ACCESS_g", referenced from:
_H5P_CLS_FILE_ACCESS_g$non_lazy_ptr in libnetcdf.a(nc4file.o)
"_H5T_NATIVE_SCHAR_g", referenced from:
_H5T_NATIVE_SCHAR_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Sget_simple_extent_dims", referenced from:
_nc4_find_dim_len in libnetcdf.a(nc4internal.o)
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_STD_U64BE_g", referenced from:
_H5T_STD_U64BE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5P_CLS_FILE_CREATE_g", referenced from:
_H5P_CLS_FILE_CREATE_g$non_lazy_ptr in libnetcdf.a(nc4file.o)
"_H5Dopen1", referenced from:
_nc4_open_var_grp in libnetcdf.a(nc4hdf.o)
_nc4_open_var_grp2 in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Gopen2", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_STD_I32LE_g", referenced from:
_H5T_STD_I32LE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5DSdetach_scale", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5DSattach_scale", referenced from:
_rec_reattach_scales in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pget_layout", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pset_dxpl_mpio", referenced from:
_set_par_access in libnetcdf.a(nc4hdf.o)
"_H5Tget_native_type", referenced from:
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_NATIVE_DOUBLE_g", referenced from:
_H5T_NATIVE_DOUBLE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5T_STD_I64BE_g", referenced from:
_H5T_STD_I64BE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Fopen", referenced from:
_nc_open_file in libnetcdf.a(nc4file.o)
"_H5Pset_attr_creation_order", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Aread", referenced from:
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pset_layout", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Acreate1", referenced from:
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tenum_insert", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_NATIVE_UCHAR_g", referenced from:
_H5T_NATIVE_UCHAR_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Tarray_create1", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Gget_num_objs", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5check_version", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_open_file in libnetcdf.a(nc4file.o)
_nc_open_file in libnetcdf.a(nc4file.o)
"_H5open", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_open_file in libnetcdf.a(nc4file.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_IEEE_F64LE_g", referenced from:
_H5T_IEEE_F64LE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5T_NATIVE_SHORT_g", referenced from:
_H5T_NATIVE_SHORT_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Fflush", referenced from:
_sync_netcdf4_file in libnetcdf.a(nc4file.o)
"_H5Aget_num_attrs", referenced from:
_nc4_delete_hdf5_att in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pset_fapl_mpio", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_open_file in libnetcdf.a(nc4file.o)
"_H5Adelete", referenced from:
_nc_del_att in libnetcdf.a(nc4attr.o)
_nc4_delete_hdf5_att in libnetcdf.a(nc4hdf.o)
"_H5Tcommit1", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_STD_I8BE_g", referenced from:
_H5T_STD_I8BE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Topen2", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Gmove", referenced from:
_nc_rename_var in libnetcdf.a(nc4var.o)
"_H5Pset_shuffle", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Dcreate1", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pset_deflate", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pset_fapl_mpiposix", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_open_file in libnetcdf.a(nc4file.o)
"_H5Tenum_create", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Sget_simple_extent_npoints", referenced from:
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
"_H5Tget_member_value", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Sget_simple_extent_ndims", referenced from:
_nc4_find_dim_len in libnetcdf.a(nc4internal.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5DSget_scale_name", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Eset_auto1", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_open_file in libnetcdf.a(nc4file.o)
"_H5Tget_size", referenced from:
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5DSiterate_scales", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5DSget_num_scales", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tget_member_offset", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_IEEE_F32BE_g", referenced from:
_H5T_IEEE_F32BE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5T_STD_U16BE_g", referenced from:
_H5T_STD_U16BE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Tget_nmembers", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5P_CLS_DATASET_CREATE_g", referenced from:
_H5P_CLS_DATASET_CREATE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Gcreate2", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tequal", referenced from:
_nc4_rec_find_hdf_type in libnetcdf.a(nc4internal.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
"_H5DSis_scale", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_STD_U64LE_g", referenced from:
_H5T_STD_U64LE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5T_STD_U8BE_g", referenced from:
_H5T_STD_U8BE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5T_STD_I16BE_g", referenced from:
_H5T_STD_I16BE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5T_NATIVE_UINT_g", referenced from:
_H5T_NATIVE_UINT_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Pget_fill_value", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tis_variable_str", referenced from:
_get_netcdf_type in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pset_cache", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_open_file in libnetcdf.a(nc4file.o)
"_H5T_NATIVE_LLONG_g", referenced from:
_H5T_NATIVE_LLONG_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Aclose", referenced from:
_nc4_delete_hdf5_att in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pset_libver_bounds", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_open_file in libnetcdf.a(nc4file.o)
"_H5Tcopy", referenced from:
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
"_H5Pget_chunk", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_STD_I64LE_g", referenced from:
_H5T_STD_I64LE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Dclose", referenced from:
_nc_rename_att in libnetcdf.a(nc4attr.o)
_nc_del_att in libnetcdf.a(nc4attr.o)
_nc4_find_dim_len in libnetcdf.a(nc4internal.o)
_nc4_rec_grp_del in libnetcdf.a(nc4internal.o)
_nc4_rec_grp_del in libnetcdf.a(nc4internal.o)
_nc4_rec_grp_del in libnetcdf.a(nc4internal.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Aget_name", referenced from:
_nc4_delete_hdf5_att in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tset_strpad", referenced from:
_get_hdf_typeid in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
"_H5Dget_create_plist", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Oget_info_by_idx", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Pfill_value_defined", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tget_order", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Fclose", referenced from:
_nc_create_file in libnetcdf.a(nc4file.o)
_nc_open_file in libnetcdf.a(nc4file.o)
_close_netcdf4_file in libnetcdf.a(nc4file.o)
"_H5Tget_member_name", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_STD_U32BE_g", referenced from:
_H5T_STD_U32BE_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5T_NATIVE_USHORT_g", referenced from:
_H5T_NATIVE_USHORT_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5P_CLS_DATASET_XFER_g", referenced from:
_H5P_CLS_DATASET_XFER_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Gclose", referenced from:
_nc4_rec_grp_del in libnetcdf.a(nc4internal.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Dget_type", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tget_super", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Tget_array_ndims", referenced from:
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5Screate_simple", referenced from:
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_get_vara in libnetcdf.a(nc4hdf.o)
_pg_att_grpa in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5T_NATIVE_FLOAT_g", referenced from:
_H5T_NATIVE_FLOAT_g$non_lazy_ptr in libnetcdf.a(nc4hdf.o)
"_H5Aopen_idx", referenced from:
_nc4_delete_hdf5_att in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_read_metadata in libnetcdf.a(nc4hdf.o)
"_H5DSset_scale", referenced from:
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
"_H5Dextend", referenced from:
_nc4_put_vara in libnetcdf.a(nc4hdf.o)
_nc4_rec_write_metadata in libnetcdf.a(nc4hdf.o)
ld: symbol(s) not found
collect2: ld returned 1 exit status
configure:29655: $? = 1
configure: failed program was:
| /* confdefs.h. */
| #define PACKAGE_NAME "MOAB"
| #define PACKAGE_TARNAME "moab"
| #define PACKAGE_VERSION "3.99"
| #define PACKAGE_STRING "MOAB 3.99"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE "moab"
| #define VERSION "3.99"
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define MB_VERSION "3.99"
| #define MB_VERSION_MAJOR 3
| #define MB_VERSION_MINOR 99
| #define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
| #define MOAB_HAVE_INTTYPES_H /**/
| #define MOAB_HAVE_STDINT_H /**/
| #define MOAB_HAVE_SYS_TYPES_H /**/
| #define MOAB_HAVE_STDDEF_H /**/
| #define MOAB_HAVE_STDLIB_H /**/
| #define MOAB_HAVE_SIZE_T /**/
| #define MOAB_HAVE_PTRDIFF_T /**/
| #define HAVE_HDF5_H 1
| #define HAVE_NETCDF_H 1
| /* end confdefs.h. */
| #include <netcdf.hh>
| #ifdef FC_DUMMY_MAIN
| #ifndef FC_DUMMY_MAIN_EQ_F77
| # ifdef __cplusplus
| extern "C"
| # endif
| int FC_DUMMY_MAIN() { return 1; }
| #endif
| #endif
| int
| main ()
| {
| NcFile ncf("foo",NcFile::ReadOnly);
| ;
| return 0;
| }
configure:29669: result: no
configure:29671: WARNING: NetCDF C++ API not found
configure:29690: error: "NetCDF not found or not working"
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=i386-apple-darwin9.7.0
ac_cv_c_compiler_gnu=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=set
ac_cv_env_CC_value=mpicc
ac_cv_env_CFLAGS_set=set
ac_cv_env_CFLAGS_value='-g -O0'
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=set
ac_cv_env_CXXFLAGS_value='-g -O0'
ac_cv_env_CXX_set=set
ac_cv_env_CXX_value=mpicxx
ac_cv_env_F77_set=set
ac_cv_env_F77_value=mpif77
ac_cv_env_FCFLAGS_set=
ac_cv_env_FCFLAGS_value=
ac_cv_env_FC_set=set
ac_cv_env_FC_value=mpif77
ac_cv_env_FFLAGS_set=
ac_cv_env_FFLAGS_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_MPIEXEC_NP_set=
ac_cv_env_MPIEXEC_NP_value=
ac_cv_env_MPIEXEC_set=
ac_cv_env_MPIEXEC_value=
ac_cv_env_NP_set=
ac_cv_env_NP_value=
ac_cv_env_PYTHON_set=
ac_cv_env_PYTHON_value=
ac_cv_env_QTDIR_set=
ac_cv_env_QTDIR_value=
ac_cv_env_XMKMF_set=
ac_cv_env_XMKMF_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=yes
ac_cv_fc_compiler_gnu=yes
ac_cv_header_Python_h=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_hdf5_h=yes
ac_cv_header_ieeefp_h=no
ac_cv_header_inttypes_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_mpi_h=yes
ac_cv_header_netcdf_h=yes
ac_cv_header_numpy_arrayobject_h=yes
ac_cv_header_pyconfig_h=yes
ac_cv_header_sstream_h=no
ac_cv_header_stdc=yes
ac_cv_header_stddef_h=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_strstream=yes
ac_cv_header_strstream_h=no
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_host=i386-apple-darwin9.7.0
ac_cv_lib_gpfs_gpfs_stat=no
ac_cv_lib_hdf5_H5Pset_fapl_mpio=yes
ac_cv_lib_hdf5___H5Fopen=yes
ac_cv_lib_sz_SZ_Decompress=no
ac_cv_lib_z_deflate=yes
ac_cv_objext=o
ac_cv_path_EGREP='/usr/bin/grep -E'
ac_cv_path_FGREP='/usr/bin/grep -F'
ac_cv_path_GREP=/usr/bin/grep
ac_cv_path_SED=sed
ac_cv_path_install='/opt/local/bin/ginstall -c'
ac_cv_path_mkdir=/opt/local/bin/gmkdir
ac_cv_prog_AWK=gawk
ac_cv_prog_CPP='mpicc -E'
ac_cv_prog_CXXCPP='mpicxx -E'
ac_cv_prog_MPIEXEC=mpiexec
ac_cv_prog_PYTHON=python
ac_cv_prog_SED=sed
ac_cv_prog_ZCAT='gunzip -c'
ac_cv_prog_ac_ct_AR=ar
ac_cv_prog_ac_ct_DSYMUTIL=dsymutil
ac_cv_prog_ac_ct_LIPO=lipo
ac_cv_prog_ac_ct_NMEDIT=nmedit
ac_cv_prog_ac_ct_OTOOL=otool
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_cxx_g=yes
ac_cv_prog_f77_g=yes
ac_cv_prog_fc_g=yes
ac_cv_prog_make_make_set=yes
ac_cv_target=i386-apple-darwin9.7.0
ac_cv_type_ptrdiff_t=yes
ac_cv_type_size_t=yes
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
lt_cv_apple_cc_single_mod=yes
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_exported_symbols_list=yes
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld
lt_cv_path_LDCXX=/usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld
lt_cv_path_NM='/usr/bin/nm -p'
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_c_o_F77=yes
lt_cv_prog_compiler_c_o_FC=yes
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_pic_works_F77=yes
lt_cv_prog_compiler_pic_works_FC=yes
lt_cv_prog_compiler_rtti_exceptions=no
lt_cv_prog_compiler_static_works=no
lt_cv_prog_compiler_static_works_CXX=no
lt_cv_prog_compiler_static_works_F77=no
lt_cv_prog_compiler_static_works_FC=no
lt_cv_prog_gnu_ld=no
lt_cv_prog_gnu_ldcxx=no
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([BCDEGRST]
[BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*
\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \
([^ ]*\)$/ {"\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/
^: \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \
([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/
^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern
int \1();/p'\'' -e '\''s/^[BCDEGRST]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_max_cmd_len=196608
mk_cv_cxx_unordered_map=std::tr1
snl_cv_template_func_specialization=yes
snl_cv_template_specialization=yes
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='${SHELL} /Users/likask/MyBuild/src/moab-svn/trunk/missing --
run aclocal-1.10'
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='${SHELL} /Users/likask/MyBuild/src/moab-svn/trunk/missing --run
tar'
AM_CFLAGS=''
AM_CPPFLAGS=' -I/Users/likask/MyBuild/hdf5-1.8.3_darwin/include -
isystem /Users/likask/MyBuild/hdf5-1.8.3_darwin/include '
AM_CXXFLAGS=''
AM_LDFLAGS=''
AR='ar'
AUTOCONF='${SHELL} /Users/likask/MyBuild/src/moab-svn/trunk/missing --
run autoconf'
AUTOHEADER='${SHELL} /Users/likask/MyBuild/src/moab-svn/trunk/missing
--run autoheader'
AUTOMAKE='${SHELL} /Users/likask/MyBuild/src/moab-svn/trunk/missing --
run automake-1.10'
AWK='gawk'
BABEL_DIR=''
CC='mpicc'
CCDEPMODE='depmode=gcc3'
CFLAGS='-g -O0 -Wall -pipe'
CGM_CPPFLAGS=''
CGM_LDFLAGS=''
CGM_LIBS=''
CGM_LTFLAGS=''
CHACO_INCLUDES=''
CHACO_LIBS=''
CPP='mpicc -E'
CPPFLAGS=' -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/
unordered_map'
CXX='mpicxx'
CXXCPP='mpicxx -E'
CXXDEPMODE='depmode=gcc3'
CXXFLAGS='-g -O0 -Wall -pipe'
CYGPATH_W='echo'
DEFINES=' -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -
DUSE_MPI -DHDF5_FILE -DHDF5_PARALLEL'
DEFS=''
DEPDIR='.deps'
DISTCHECK_CONFIGURE_FLAGS=' --enable-imesh="nofortran" --with-hdf5="/
Users/likask/MyBuild/hdf5-1.8.3_darwin" --with-netcdf="/Users/likask/
MyBuild/netcdf-4.0.1_darwin"'
DOXYGEN=''
DSYMUTIL='dsymutil'
DUMPBIN=''
ECHO_C='\c'
ECHO_N=''
ECHO_T=''
EGREP='/usr/bin/grep -E'
ENABLE_DOXYGEN_FALSE=''
ENABLE_DOXYGEN_TRUE=''
ENABLE_dagmc_FALSE=''
ENABLE_dagmc_TRUE=''
ENABLE_gsets_FALSE=''
ENABLE_gsets_TRUE=''
ENABLE_hexmodops_FALSE=''
ENABLE_hexmodops_TRUE=''
ENABLE_imesh_FALSE='#'
ENABLE_imesh_TRUE=''
ENABLE_mbchaco_FALSE=''
ENABLE_mbchaco_TRUE=''
ENABLE_mbconvert_FALSE=''
ENABLE_mbconvert_TRUE=''
ENABLE_mbcoupler_FALSE=''
ENABLE_mbcoupler_TRUE=''
ENABLE_mbdepth_FALSE=''
ENABLE_mbdepth_TRUE=''
ENABLE_mbperf_FALSE=''
ENABLE_mbperf_TRUE=''
ENABLE_mbsize_FALSE=''
ENABLE_mbsize_TRUE=''
ENABLE_mbskin_FALSE=''
ENABLE_mbskin_TRUE=''
ENABLE_mbsurfplot_FALSE=''
ENABLE_mbsurfplot_TRUE=''
ENABLE_mbtagprop_FALSE=''
ENABLE_mbtagprop_TRUE=''
ENABLE_mbzoltan_FALSE=''
ENABLE_mbzoltan_TRUE=''
ENABLE_mcnpmit_FALSE=''
ENABLE_mcnpmit_TRUE=''
ENABLE_pytaps_FALSE=''
ENABLE_pytaps_TRUE='#'
ENABLE_qvdual_FALSE=''
ENABLE_qvdual_TRUE=''
ENABLE_spheredecomp_FALSE=''
ENABLE_spheredecomp_TRUE=''
EXEEXT=''
EXPORT_LDFLAGS=' -L/Users/likask/MyBuild/hdf5-1.8.3_darwin/lib'
EXPORT_LTFLAGS=''
F77='mpif77'
FC='mpif77'
FCFLAGS=' -O2 -DNDEBUG'
FCLIBS=''
FFLAGS='-g -O2'
FGREP='/usr/bin/grep -F'
GREP='/usr/bin/grep'
HAVE_CGM_FALSE=''
HAVE_CGM_TRUE=''
HAVE_ZCAT_FALSE=''
HAVE_ZCAT_TRUE='#'
HDF5_FILE_FALSE='#'
HDF5_FILE_TRUE=''
HDF5_LIBS=' -lz -lhdf5'
INCLUDES=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
LD='/usr/libexec/gcc/i686-apple-darwin9/4.0.1/ld'
LDFLAGS=''
LIBOBJS=''
LIBS='-lm'
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIPO='lipo'
LN_S='ln -s'
LTLIBOBJS=''
MAKEINFO='${SHELL} /Users/likask/MyBuild/src/moab-svn/trunk/missing --
run makeinfo'
MKDIR_P='/opt/local/bin/gmkdir -p'
MOAB_CGM_DEFINES=''
MOAB_CXX_LIBS=''
MOAB_CXX_LINKFLAGS=''
MOC=''
MPIEXEC='mpiexec'
MPIEXEC_NP='-np'
NETCDF_FILE_FALSE=''
NETCDF_FILE_TRUE=''
NETCDF_LIBS=''
NM='/usr/bin/nm -p'
NMEDIT='nmedit'
NP='2'
NUMPY_DIR='/Library/Frameworks/Python.framework/Versions/4.3.0/lib/
python2.5/site-packages/numpy-1.3.0n1-py2.5-macosx-10.3-fat.egg/numpy/
core/include'
OBJDUMP='false'
OBJEXT='o'
OTOOL64=':'
OTOOL='otool'
PACKAGE='moab'
PACKAGE_BUGREPORT=''
PACKAGE_NAME='MOAB'
PACKAGE_STRING='MOAB 3.99'
PACKAGE_TARNAME='moab'
PACKAGE_VERSION='3.99'
PARALLEL_FALSE='#'
PARALLEL_HDF5_FALSE='#'
PARALLEL_HDF5_TRUE=''
PARALLEL_TRUE=''
PATH_SEPARATOR=':'
PYTHON='python'
PYTHON_DIR='PYCONFIG_DIR'
QTDIR=''
QVDUAL_INCLUDES=''
QVDUAL_LIBS=''
RANLIB='ranlib'
SED='sed'
SET_MAKE=''
SHELL='/bin/sh'
STRIP='strip'
UIC=''
USE_BABEL=''
USE_BABEL_FALSE=''
USE_BABEL_TRUE=''
USE_MPIEXEC_FALSE='#'
USE_MPIEXEC_TRUE=''
USE_MPI_FALSE='#'
USE_MPI_TRUE=''
VERSION='3.99'
VTK_LIB_DIR=''
XMKMF=''
X_CFLAGS=''
X_EXTRA_LIBS=''
X_LIBS=''
X_PRE_LIBS=''
ZCAT='gunzip -c'
ZOLTAN_INC_FLAGS=''
ZOLTAN_LIBS=''
ZOLTAN_LIB_FLAGS=''
ac_ct_CC=''
ac_ct_CXX=''
ac_ct_DUMPBIN=''
ac_ct_F77=''
ac_ct_FC=''
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__quote=''
am__tar='${AMTAR} chof - "$$tardir"'
am__untar='${AMTAR} xf -'
bindir='${exec_prefix}/bin'
build='i386-apple-darwin9.7.0'
build_alias=''
build_cpu='i386'
build_os='darwin9.7.0'
build_vendor='apple'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host='i386-apple-darwin9.7.0'
host_alias=''
host_cpu='i386'
host_os='darwin9.7.0'
host_vendor='apple'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='$(SHELL) /Users/likask/MyBuild/src/moab-svn/trunk/install-
sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
lt_ECHO='/bin/echo'
mandir='${datarootdir}/man'
mkdir_p='/opt/local/bin/gmkdir -p'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/Users/likask/MyBuild/moab-svn_darwin'
program_transform_name='s,x,x,'
psdir='${docdir}'
pylibdir='${exec_prefix}/lib/python2.5/site-packages'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target='i386-apple-darwin9.7.0'
target_alias=''
target_cpu='i386'
target_os='darwin9.7.0'
target_vendor='apple'
## ----------- ##
## confdefs.h. ##
## ----------- ##
#define PACKAGE_NAME "MOAB"
#define PACKAGE_TARNAME "moab"
#define PACKAGE_VERSION "3.99"
#define PACKAGE_STRING "MOAB 3.99"
#define PACKAGE_BUGREPORT ""
#define PACKAGE "moab"
#define VERSION "3.99"
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define MB_VERSION "3.99"
#define MB_VERSION_MAJOR 3
#define MB_VERSION_MINOR 99
#define MB_VERSION_STRING "MOAB 3.99 (Alpha)"
#define MOAB_HAVE_INTTYPES_H /**/
#define MOAB_HAVE_STDINT_H /**/
#define MOAB_HAVE_SYS_TYPES_H /**/
#define MOAB_HAVE_STDDEF_H /**/
#define MOAB_HAVE_STDLIB_H /**/
#define MOAB_HAVE_SIZE_T /**/
#define MOAB_HAVE_PTRDIFF_T /**/
#define HAVE_HDF5_H 1
#define HAVE_NETCDF_H 1
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