[MOAB-dev] MOAB distcheck failed.
Nightly Test
kraftche at cae.wisc.edu
Sun May 17 02:03:19 CDT 2009
{ test ! -d moab-3.99 || { find moab-3.99 -type d ! -perm -200 -exec chmod u+w {} ';' && rm -fr moab-3.99; }; }
test -d moab-3.99 || mkdir moab-3.99
list='mhdf parallel . test tools doc doxygen'; for subdir in $list; do \
if test "$subdir" = .; then :; else \
test -d "moab-3.99/$subdir" \
|| /bin/mkdir -p "moab-3.99/$subdir" \
|| exit 1; \
distdir=`CDPATH="${ZSH_VERSION+.}:" && cd moab-3.99 && pwd`; \
top_distdir=`CDPATH="${ZSH_VERSION+.}:" && cd moab-3.99 && pwd`; \
(cd $subdir && \
make \
top_distdir="$top_distdir" \
distdir="$distdir/$subdir" \
am__remove_distdir=: \
am__skip_length_check=: \
distdir) \
|| exit 1; \
fi; \
done
make[1]: Entering directory `/home/jason/moab/test/dist/mhdf'
make[1]: Leaving directory `/home/jason/moab/test/dist/mhdf'
make[1]: Entering directory `/home/jason/moab/test/dist/parallel'
list=''; for subdir in $list; do \
if test "$subdir" = .; then :; else \
test -d "/home/jason/moab/test/dist/moab-3.99/parallel/$subdir" \
|| /bin/mkdir -p "/home/jason/moab/test/dist/moab-3.99/parallel/$subdir" \
|| exit 1; \
distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99/parallel && pwd`; \
top_distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99 && pwd`; \
(cd $subdir && \
make \
top_distdir="$top_distdir" \
distdir="$distdir/$subdir" \
am__remove_distdir=: \
am__skip_length_check=: \
distdir) \
|| exit 1; \
fi; \
done
make[1]: Leaving directory `/home/jason/moab/test/dist/parallel'
make[1]: Entering directory `/home/jason/moab/test/dist/test'
list='dual h5file obb perf'; for subdir in $list; do \
if test "$subdir" = .; then :; else \
test -d "/home/jason/moab/test/dist/moab-3.99/test/$subdir" \
|| /bin/mkdir -p "/home/jason/moab/test/dist/moab-3.99/test/$subdir" \
|| exit 1; \
distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99/test && pwd`; \
top_distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99 && pwd`; \
(cd $subdir && \
make \
top_distdir="$top_distdir" \
distdir="$distdir/$subdir" \
am__remove_distdir=: \
am__skip_length_check=: \
distdir) \
|| exit 1; \
fi; \
done
make[2]: Entering directory `/home/jason/moab/test/dist/test/dual'
make[2]: Leaving directory `/home/jason/moab/test/dist/test/dual'
make[2]: Entering directory `/home/jason/moab/test/dist/test/h5file'
make[2]: Leaving directory `/home/jason/moab/test/dist/test/h5file'
make[2]: Entering directory `/home/jason/moab/test/dist/test/obb'
make[2]: Leaving directory `/home/jason/moab/test/dist/test/obb'
make[2]: Entering directory `/home/jason/moab/test/dist/test/perf'
make[2]: Leaving directory `/home/jason/moab/test/dist/test/perf'
make[1]: Leaving directory `/home/jason/moab/test/dist/test'
make[1]: Entering directory `/home/jason/moab/test/dist/tools'
list='iMesh mbchaco mbcoupler mbzoltan mbperf mcnpmit qvdual dagmc'; for subdir in $list; do \
if test "$subdir" = .; then :; else \
test -d "/home/jason/moab/test/dist/moab-3.99/tools/$subdir" \
|| /bin/mkdir -p "/home/jason/moab/test/dist/moab-3.99/tools/$subdir" \
|| exit 1; \
distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99/tools && pwd`; \
top_distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99 && pwd`; \
(cd $subdir && \
make \
top_distdir="$top_distdir" \
distdir="$distdir/$subdir" \
am__remove_distdir=: \
am__skip_length_check=: \
distdir) \
|| exit 1; \
fi; \
done
make[2]: Entering directory `/home/jason/moab/test/dist/tools/iMesh'
list='. SIDL'; for subdir in $list; do \
if test "$subdir" = .; then :; else \
test -d "/home/jason/moab/test/dist/moab-3.99/tools/iMesh/$subdir" \
|| /bin/mkdir -p "/home/jason/moab/test/dist/moab-3.99/tools/iMesh/$subdir" \
|| exit 1; \
distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99/tools/iMesh && pwd`; \
top_distdir=`CDPATH="${ZSH_VERSION+.}:" && cd /home/jason/moab/test/dist/moab-3.99 && pwd`; \
(cd $subdir && \
make \
top_distdir="$top_distdir" \
distdir="$distdir/$subdir" \
am__remove_distdir=: \
am__skip_length_check=: \
distdir) \
|| exit 1; \
fi; \
done
make[3]: Entering directory `/home/jason/moab/test/dist/tools/iMesh/SIDL'
test -d /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL || /bin/mkdir -p /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL || exit 1
test -d /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver || /bin/mkdir -p /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver || exit 1
cp -p ../../../../src/tools/iMesh/SIDL/iBase.sidl /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/iBase.sidl
cp -p ../../../../src/tools/iMesh/SIDL/iMesh.sidl /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/iMesh.sidl
cp -p ../../../../src/tools/iMesh/SIDL/iMesh_SIDL.sidl /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/iMesh_SIDL.sidl
cp -p ../../../../src/tools/iMesh/SIDL/mserver/iBase_Error_Impl.cc /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver/iBase_Error_Impl.cc
cp -p ../../../../src/tools/iMesh/SIDL/mserver/iBase_Error_Impl.hh /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver/iBase_Error_Impl.hh
cp -p ../../../../src/tools/iMesh/SIDL/mserver/iMesh_SIDL_MeshSidl_Impl.cc /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver/iMesh_SIDL_MeshSidl_Impl.cc
cp -p ../../../../src/tools/iMesh/SIDL/mserver/iMesh_SIDL_MeshSidl_Impl.hh /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver/iMesh_SIDL_MeshSidl_Impl.hh
cp -p ../../../../src/tools/iMesh/SIDL/mserver/iMesh_Factory_Impl.cc /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver/iMesh_Factory_Impl.cc
cp -p ../../../../src/tools/iMesh/SIDL/iBase_SIDL_defs.h /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/iBase_SIDL_defs.h
cp -p ../../../../src/tools/iMesh/SIDL/testcxx.cpp /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/testcxx.cpp
cp -p ../../../../src/tools/iMesh/SIDL/mserver.make /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/mserver.make
cp -p ../../../../src/tools/iMesh/SIDL/Cclient.make /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/Cclient.make
cp -p ../../../../src/tools/iMesh/SIDL/Fclient.make /home/jason/moab/test/dist/moab-3.99/tools/iMesh/SIDL/Fclient.make
make[3]: Leaving directory `/home/jason/moab/test/dist/tools/iMesh/SIDL'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/iMesh'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/mbchaco'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/mbchaco'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/mbcoupler'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/mbcoupler'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/mbzoltan'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/mbzoltan'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/mbperf'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/mbperf'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/mcnpmit'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/mcnpmit'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/qvdual'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/qvdual'
make[2]: Entering directory `/home/jason/moab/test/dist/tools/dagmc'
make[2]: Leaving directory `/home/jason/moab/test/dist/tools/dagmc'
make[1]: Leaving directory `/home/jason/moab/test/dist/tools'
make[1]: Entering directory `/home/jason/moab/test/dist/doc'
make[1]: Leaving directory `/home/jason/moab/test/dist/doc'
make[1]: Entering directory `/home/jason/moab/test/dist/doxygen'
make[1]: Leaving directory `/home/jason/moab/test/dist/doxygen'
find moab-3.99 -type d ! -perm -777 -exec chmod a+rwx {} \; -o \
! -type d ! -perm -444 -links 1 -exec chmod a+r {} \; -o \
! -type d ! -perm -400 -exec chmod a+r {} \; -o \
! -type d ! -perm -444 -exec /bin/sh /home/jason/moab/test/src/install-sh -c -m a+r {} {} \; \
|| chmod -R a+r moab-3.99
tardir=moab-3.99 && /bin/sh /home/jason/moab/test/src/missing --run tar chof - "$tardir" | GZIP=--best gzip -c >moab-3.99.tar.gz
{ test ! -d moab-3.99 || { find moab-3.99 -type d ! -perm -200 -exec chmod u+w {} ';' && rm -fr moab-3.99; }; }
case 'moab-3.99.tar.gz' in \
*.tar.gz*) \
GZIP=--best gunzip -c moab-3.99.tar.gz | /bin/sh /home/jason/moab/test/src/missing --run tar xf - ;;\
*.tar.bz2*) \
bunzip2 -c moab-3.99.tar.bz2 | /bin/sh /home/jason/moab/test/src/missing --run tar xf - ;;\
*.tar.lzma*) \
unlzma -c moab-3.99.tar.lzma | /bin/sh /home/jason/moab/test/src/missing --run tar xf - ;;\
*.tar.Z*) \
uncompress -c moab-3.99.tar.Z | /bin/sh /home/jason/moab/test/src/missing --run tar xf - ;;\
*.shar.gz*) \
GZIP=--best gunzip -c moab-3.99.shar.gz | unshar ;;\
*.zip*) \
unzip moab-3.99.zip ;;\
esac
chmod -R a-w moab-3.99; chmod a+w moab-3.99
mkdir moab-3.99/_build
mkdir moab-3.99/_inst
chmod a-w moab-3.99
dc_install_base=`CDPATH="${ZSH_VERSION+.}:" && cd moab-3.99/_inst && pwd | sed -e 's,^[^:\\/]:[\\/],/,'` \
&& dc_destdir="${TMPDIR-/tmp}/am-dc-$$/" \
&& cd moab-3.99/_build \
&& ../configure --srcdir=.. --prefix="$dc_install_base" \
\
&& make \
&& make dvi \
&& make check \
&& make install \
&& make installcheck \
&& make uninstall \
&& make distuninstallcheck_dir="$dc_install_base" \
distuninstallcheck \
&& chmod -R a-w "$dc_install_base" \
&& ({ \
(cd ../.. && umask 077 && mkdir "$dc_destdir") \
&& make DESTDIR="$dc_destdir" install \
&& make DESTDIR="$dc_destdir" uninstall \
&& make DESTDIR="$dc_destdir" \
distuninstallcheck_dir="$dc_destdir" distuninstallcheck; \
} || { rm -rf "$dc_destdir"; exit 1; }) \
&& rm -rf "$dc_destdir" \
&& make dist \
&& rm -rf moab-3.99.tar.gz \
&& make distcleancheck
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking target system type... x86_64-unknown-linux-gnu
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for sed... sed
checking for style of include used by make... GNU
checking for cc... cc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables...
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ISO C89... none needed
checking dependency style of cc... gcc3
checking how to run the C preprocessor... cc -E
checking for CC... no
checking for aCC... no
checking for cxx... no
checking for xlC_r... no
checking for xlC... no
checking for c++... c++
checking whether we are using the GNU C++ compiler... yes
checking whether c++ accepts -g... yes
checking dependency style of c++... gcc3
checking how to run the C++ preprocessor... c++ -E
checking for gfortran... gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... yes
checking for gfortran... gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran accepts -g... yes
checking for known C compilers... GNU
checking for known compiler/OS combinations... GNU:x86_64
checking for known c++ compilers... GNU
checking for known compiler/OS combinations... GNU:x86_64
checking whether ln -s works... yes
checking whether make sets $(MAKE)... (cached) yes
checking for a sed that does not truncate output... /bin/sed
checking for grep that handles long lines and -e... /bin/grep
checking for egrep... /bin/grep -E
checking for ld used by cc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for /usr/bin/ld option to reload object files... -r
checking for BSD-compatible nm... /usr/bin/nm -B
checking how to recognize dependent libraries... pass_all
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking how to run the C++ preprocessor... c++ -E
checking the maximum length of command line arguments... 98304
checking command to parse /usr/bin/nm -B output from cc object... ok
checking for objdir... .libs
checking for ar... ar
checking for ranlib... ranlib
checking for strip... strip
checking if cc supports -fno-rtti -fno-exceptions... no
checking for cc option to produce PIC... -fPIC
checking if cc PIC flag -fPIC works... yes
checking if cc static flag -static works... yes
checking if cc supports -c -o file.o... yes
checking whether the cc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... no
checking whether to build static libraries... yes
configure: creating libtool
appending configuration tag "CXX" to libtool
checking for ld used by c++... /usr/bin/ld -m elf_x86_64
checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
checking whether the c++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking for c++ option to produce PIC... -fPIC
checking if c++ PIC flag -fPIC works... yes
checking if c++ static flag -static works... yes
checking if c++ supports -c -o file.o... yes
checking whether the c++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
(cached) (cached) checking how to hardcode library paths into programs... immediate
appending configuration tag "F77" to libtool
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... no
checking whether to build static libraries... yes
checking for gfortran option to produce PIC... -fPIC
checking if gfortran PIC flag -fPIC works... yes
checking if gfortran static flag -static works... yes
checking if gfortran supports -c -o file.o... yes
checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking dynamic linker characteristics... GNU/Linux ld.so
(cached) (cached) checking how to hardcode library paths into programs... immediate
checking for gunzip... gunzip -c
checking for gzip... (cached) gunzip -c
checking for zcat... (cached) gunzip -c
checking if C++ compiler supports template class specialization... yes
checking if C++ compiler supports template function specialization... yes
checking how to get verbose linking output from gfortran... -v
checking for Fortran libraries of gfortran... -L/usr/lib/gcc/x86_64-linux-gnu/4.3.2 -L/usr/lib/gcc/x86_64-linux-gnu/4.3.2/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.3.2/../../.. -lgfortranbegin -lgfortran -lm
checking for dummy main to link with Fortran libraries... none
checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking for sys/types.h... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for size_t... yes
checking for ptrdiff_t... yes
checking ieeefp.h usability... no
checking ieeefp.h presence... no
checking for ieeefp.h... no
checking for C++ unordered_map... std::tr1
checking for deflate in -lz... yes
checking for SZ_Decompress in -lsz... no
checking if HDF5 support is enabled... yes
checking hdf5.h usability... yes
checking hdf5.h presence... yes
checking for hdf5.h... yes
checking for H5Fopen in -lhdf5... yes
checking if NetCDF support is enabled... yes
checking strstream.h usability... no
checking strstream.h presence... no
checking for strstream.h... no
checking sstream.h usability... no
checking sstream.h presence... no
checking for sstream.h... no
checking strstream usability... yes
checking strstream presence... yes
checking for strstream... yes
checking netcdf.h usability... yes
checking netcdf.h presence... yes
checking for netcdf.h... yes
checking for netcdf.hh... yes
checking for netcdf_c++ library... yes
checking if mbconvert is to be built... yes
checking if hexmodops is to be built... yes
checking if mbchaco is to be built... no
checking if mbperf is to be built... yes
checking if qvdual is to be built... no
checking if mbsize is to be built... yes
checking if mbskin is to be built... yes
checking if mbtagprop is to be built... yes
checking if mcnpmit is to be built... no
checking if mbcoupler is to be built... no
checking if spheredecomp is to be built... yes
checking if mbsurfplot is to be built... yes
checking if mbzoltan is to be built... no
checking if dagmc is to be built... yes
checking if gsets is to be built... yes
checking if iMesh support is to be built... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating moab.make
config.status: creating testdir.h
config.status: creating parallel/Makefile
config.status: creating mhdf/Makefile
config.status: creating test/Makefile
config.status: creating test/h5file/Makefile
config.status: creating test/dual/Makefile
config.status: creating test/obb/Makefile
config.status: creating test/perf/Makefile
config.status: creating tools/Makefile
config.status: creating tools/iMesh/Makefile
config.status: creating tools/iMesh/iMesh-Defs.inc
config.status: creating tools/iMesh/SIDL/iMesh-SIDL-Defs.inc
config.status: creating tools/iMesh/SIDL/Makefile
config.status: creating tools/iMesh/SIDL/common.make
config.status: creating tools/mbperf/Makefile
config.status: creating tools/mbchaco/Makefile
config.status: creating tools/mbcoupler/Makefile
config.status: creating tools/mbzoltan/Config.moab
config.status: creating tools/mbzoltan/Makefile
config.status: creating tools/mcnpmit/Makefile
config.status: creating tools/qvdual/Makefile
config.status: creating tools/dagmc/Makefile
config.status: creating tools/dagmc/dagmc.make
config.status: creating doc/Makefile
config.status: creating doxygen/Makefile
config.status: creating config.h
config.status: creating MBVersion.h
config.status: creating MBEntityHandle.h
config.status: creating MBCN_FCDefs.h
config.status: executing depfiles commands
C: cc -Wall -pipe -pedantic -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map
C++: c++ -Wall -pipe -pedantic -O2 -DNDEBUG -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map
Fortran: gfortran -g -O2 -O2 -DNDEBUG
make[1]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build'
make all-recursive
make[2]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build'
Making all in mhdf
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/mhdf'
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT adjacency.lo -MD -MP -MF .deps/adjacency.Tpo -c -o adjacency.lo `test -f 'src/adjacency.c' || echo '../../mhdf/'`src/adjacency.c
cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT adjacency.lo -MD -MP -MF .deps/adjacency.Tpo -c ../../mhdf/src/adjacency.c -o adjacency.o
mv -f .deps/adjacency.Tpo .deps/adjacency.Plo
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT connectivity.lo -MD -MP -MF .deps/connectivity.Tpo -c -o connectivity.lo `test -f 'src/connectivity.c' || echo '../../mhdf/'`src/connectivity.c
cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT connectivity.lo -MD -MP -MF .deps/connectivity.Tpo -c ../../mhdf/src/connectivity.c -o connectivity.o
mv -f .deps/connectivity.Tpo .deps/connectivity.Plo
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT file-desc.lo -MD -MP -MF .deps/file-desc.Tpo -c -o file-desc.lo `test -f 'src/file-desc.c' || echo '../../mhdf/'`src/file-desc.c
cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT file-desc.lo -MD -MP -MF .deps/file-desc.Tpo -c ../../mhdf/src/file-desc.c -o file-desc.o
../../mhdf/src/file-desc.c: In function ‘alloc_file_desc’:
../../mhdf/src/file-desc.c:23: warning: pointer targets in assignment differ in signedness
../../mhdf/src/file-desc.c: In function ‘mhdf_getFileSummary’:
../../mhdf/src/file-desc.c:432: warning: pointer targets in passing argument 2 of ‘mhdf_getElemHandles’ differ in signedness
mv -f .deps/file-desc.Tpo .deps/file-desc.Plo
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT file-handle.lo -MD -MP -MF .deps/file-handle.Tpo -c -o file-handle.lo `test -f 'src/file-handle.c' || echo '../../mhdf/'`src/file-handle.c
cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT file-handle.lo -MD -MP -MF .deps/file-handle.Tpo -c ../../mhdf/src/file-handle.c -o file-handle.o
mv -f .deps/file-handle.Tpo .deps/file-handle.Plo
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT file.lo -MD -MP -MF .deps/file.Tpo -c -o file.lo `test -f 'src/file.c' || echo '../../mhdf/'`src/file.c
cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT file.lo -MD -MP -MF .deps/file.Tpo -c ../../mhdf/src/file.c -o file.o
mv -f .deps/file.Tpo .deps/file.Plo
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT nodes.lo -MD -MP -MF .deps/nodes.Tpo -c -o nodes.lo `test -f 'src/nodes.c' || echo '../../mhdf/'`src/nodes.c
cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT nodes.lo -MD -MP -MF .deps/nodes.Tpo -c ../../mhdf/src/nodes.c -o nodes.o
mv -f .deps/nodes.Tpo .deps/nodes.Plo
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT sets.lo -MD -MP -MF .deps/sets.Tpo -c -o sets.lo `test -f 'src/sets.c' || echo '../../mhdf/'`src/sets.c
cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT sets.lo -MD -MP -MF .deps/sets.Tpo -c ../../mhdf/src/sets.c -o sets.o
mv -f .deps/sets.Tpo .deps/sets.Plo
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT status.lo -MD -MP -MF .deps/status.Tpo -c -o status.lo `test -f 'src/status.c' || echo '../../mhdf/'`src/status.c
cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT status.lo -MD -MP -MF .deps/status.Tpo -c ../../mhdf/src/status.c -o status.o
mv -f .deps/status.Tpo .deps/status.Plo
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT tags.lo -MD -MP -MF .deps/tags.Tpo -c -o tags.lo `test -f 'src/tags.c' || echo '../../mhdf/'`src/tags.c
cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT tags.lo -MD -MP -MF .deps/tags.Tpo -c ../../mhdf/src/tags.c -o tags.o
mv -f .deps/tags.Tpo .deps/tags.Plo
/bin/sh ../libtool --tag=CC --mode=compile cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT util.lo -MD -MP -MF .deps/util.Tpo -c -o util.lo `test -f 'src/util.c' || echo '../../mhdf/'`src/util.c
cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT util.lo -MD -MP -MF .deps/util.Tpo -c ../../mhdf/src/util.c -o util.o
mv -f .deps/util.Tpo .deps/util.Plo
/bin/sh ../libtool --tag=CC --mode=link cc -Wall -pipe -pedantic -O2 -DNDEBUG -o libmhdf.la adjacency.lo connectivity.lo file-desc.lo file-handle.lo file.lo nodes.lo sets.lo status.lo tags.lo util.lo -lhdf5 -lm
mkdir .libs
ar cru .libs/libmhdf.a adjacency.o connectivity.o file-desc.o file-handle.o file.o nodes.o sets.o status.o tags.o util.o
ranlib .libs/libmhdf.a
creating libmhdf.la
(cd .libs && rm -f libmhdf.la && ln -s ../libmhdf.la libmhdf.la)
cc -I../../mhdf/include -I. -I../../mhdf -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT info.o -MD -MP -MF .deps/info.Tpo -c -o info.o `test -f 'example/info.c' || echo '../../mhdf/'`example/info.c
mv -f .deps/info.Tpo .deps/info.Po
/bin/sh ../libtool --tag=CC --mode=link cc -Wall -pipe -pedantic -O2 -DNDEBUG -o h5minfo info.o libmhdf.la -lm
cc -Wall -pipe -pedantic -O2 -DNDEBUG -o h5minfo info.o ./.libs/libmhdf.a /usr/lib/libhdf5.so -lpthread -lz -lm
make[3]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/mhdf'
Making all in .
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build'
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT AEntityFactory.lo -MD -MP -MF .deps/AEntityFactory.Tpo -c -o AEntityFactory.lo ../AEntityFactory.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT AEntityFactory.lo -MD -MP -MF .deps/AEntityFactory.Tpo -c ../AEntityFactory.cpp -o AEntityFactory.o
mv -f .deps/AEntityFactory.Tpo .deps/AEntityFactory.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT DualTool.lo -MD -MP -MF .deps/DualTool.Tpo -c -o DualTool.lo ../DualTool.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT DualTool.lo -MD -MP -MF .deps/DualTool.Tpo -c ../DualTool.cpp -o DualTool.o
../DualTool.cpp: In member function ‘MBErrorCode DualTool::split_pair_nonmanifold(MBEntityHandle*, MBEntityHandle*, MBEntityHandle*, std::vector<long unsigned int, std::allocator<long unsigned int> >*, std::vector<long unsigned int, std::allocator<long unsigned int> >*, MBEntityHandle*, MBEntityHandle*, MBEntityHandle*, MBEntityHandle*, MBEntityHandle*)’:
../DualTool.cpp:1976: warning: unused variable ‘cond1’
../DualTool.cpp:1985: warning: unused variable ‘cond2’
../DualTool.cpp: In member function ‘MBErrorCode DualTool::foc_get_stars(MBEntityHandle*, MBEntityHandle*, std::vector<long unsigned int, std::allocator<long unsigned int> >*, std::vector<long unsigned int, std::allocator<long unsigned int> >*)’:
../DualTool.cpp:2096: warning: ‘on_bdy’ may be used uninitialized in this function
mv -f .deps/DualTool.Tpo .deps/DualTool.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT EntitySequence.lo -MD -MP -MF .deps/EntitySequence.Tpo -c -o EntitySequence.lo ../EntitySequence.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT EntitySequence.lo -MD -MP -MF .deps/EntitySequence.Tpo -c ../EntitySequence.cpp -o EntitySequence.o
mv -f .deps/EntitySequence.Tpo .deps/EntitySequence.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT ExoIIUtil.lo -MD -MP -MF .deps/ExoIIUtil.Tpo -c -o ExoIIUtil.lo ../ExoIIUtil.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT ExoIIUtil.lo -MD -MP -MF .deps/ExoIIUtil.Tpo -c ../ExoIIUtil.cpp -o ExoIIUtil.o
mv -f .deps/ExoIIUtil.Tpo .deps/ExoIIUtil.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT FileOptions.lo -MD -MP -MF .deps/FileOptions.Tpo -c -o FileOptions.lo ../FileOptions.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT FileOptions.lo -MD -MP -MF .deps/FileOptions.Tpo -c ../FileOptions.cpp -o FileOptions.o
mv -f .deps/FileOptions.Tpo .deps/FileOptions.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT FileTokenizer.lo -MD -MP -MF .deps/FileTokenizer.Tpo -c -o FileTokenizer.lo ../FileTokenizer.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT FileTokenizer.lo -MD -MP -MF .deps/FileTokenizer.Tpo -c ../FileTokenizer.cpp -o FileTokenizer.o
mv -f .deps/FileTokenizer.Tpo .deps/FileTokenizer.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT GeomTopoTool.lo -MD -MP -MF .deps/GeomTopoTool.Tpo -c -o GeomTopoTool.lo ../GeomTopoTool.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT GeomTopoTool.lo -MD -MP -MF .deps/GeomTopoTool.Tpo -c ../GeomTopoTool.cpp -o GeomTopoTool.o
mv -f .deps/GeomTopoTool.Tpo .deps/GeomTopoTool.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT HigherOrderFactory.lo -MD -MP -MF .deps/HigherOrderFactory.Tpo -c -o HigherOrderFactory.lo ../HigherOrderFactory.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT HigherOrderFactory.lo -MD -MP -MF .deps/HigherOrderFactory.Tpo -c ../HigherOrderFactory.cpp -o HigherOrderFactory.o
mv -f .deps/HigherOrderFactory.Tpo .deps/HigherOrderFactory.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT HomXform.lo -MD -MP -MF .deps/HomXform.Tpo -c -o HomXform.lo ../HomXform.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT HomXform.lo -MD -MP -MF .deps/HomXform.Tpo -c ../HomXform.cpp -o HomXform.o
mv -f .deps/HomXform.Tpo .deps/HomXform.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBAdaptiveKDTree.lo -MD -MP -MF .deps/MBAdaptiveKDTree.Tpo -c -o MBAdaptiveKDTree.lo ../MBAdaptiveKDTree.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBAdaptiveKDTree.lo -MD -MP -MF .deps/MBAdaptiveKDTree.Tpo -c ../MBAdaptiveKDTree.cpp -o MBAdaptiveKDTree.o
../MBAdaptiveKDTree.cpp:1717: warning: ‘MBErrorCode closest_to_triangles(MBInterface*, MBEntityHandle, double, const MBCartVect&, std::vector<long unsigned int, std::allocator<long unsigned int> >&, std::vector<MBCartVect, std::allocator<MBCartVect> >&)’ defined but not used
mv -f .deps/MBAdaptiveKDTree.Tpo .deps/MBAdaptiveKDTree.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBAffineXform.lo -MD -MP -MF .deps/MBAffineXform.Tpo -c -o MBAffineXform.lo ../MBAffineXform.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBAffineXform.lo -MD -MP -MF .deps/MBAffineXform.Tpo -c ../MBAffineXform.cpp -o MBAffineXform.o
mv -f .deps/MBAffineXform.Tpo .deps/MBAffineXform.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBAlloc.lo -MD -MP -MF .deps/MBAlloc.Tpo -c -o MBAlloc.lo ../MBAlloc.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBAlloc.lo -MD -MP -MF .deps/MBAlloc.Tpo -c ../MBAlloc.cpp -o MBAlloc.o
mv -f .deps/MBAlloc.Tpo .deps/MBAlloc.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBAxisBox.lo -MD -MP -MF .deps/MBAxisBox.Tpo -c -o MBAxisBox.lo ../MBAxisBox.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBAxisBox.lo -MD -MP -MF .deps/MBAxisBox.Tpo -c ../MBAxisBox.cpp -o MBAxisBox.o
mv -f .deps/MBAxisBox.Tpo .deps/MBAxisBox.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBBits.lo -MD -MP -MF .deps/MBBits.Tpo -c -o MBBits.lo ../MBBits.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBBits.lo -MD -MP -MF .deps/MBBits.Tpo -c ../MBBits.cpp -o MBBits.o
mv -f .deps/MBBits.Tpo .deps/MBBits.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBBSPTree.lo -MD -MP -MF .deps/MBBSPTree.Tpo -c -o MBBSPTree.lo ../MBBSPTree.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBBSPTree.lo -MD -MP -MF .deps/MBBSPTree.Tpo -c ../MBBSPTree.cpp -o MBBSPTree.o
mv -f .deps/MBBSPTree.Tpo .deps/MBBSPTree.Plo
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../MeshSetSequence.cpp: In member function ‘MBErrorCode MeshSetSequence::get_parent_child_meshsets(MBEntityHandle, const SequenceManager*, std::vector<long unsigned int, std::allocator<long unsigned int> >&, int, MeshSetSequence::SearchType) const’:
../MeshSetSequence.cpp:400: warning: ‘count’ may be used uninitialized in this function
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c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteGmsh.lo -MD -MP -MF .deps/WriteGmsh.Tpo -c ../WriteGmsh.cpp -o WriteGmsh.o
mv -f .deps/WriteGmsh.Tpo .deps/WriteGmsh.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteSTL.lo -MD -MP -MF .deps/WriteSTL.Tpo -c -o WriteSTL.lo ../WriteSTL.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteSTL.lo -MD -MP -MF .deps/WriteSTL.Tpo -c ../WriteSTL.cpp -o WriteSTL.o
mv -f .deps/WriteSTL.Tpo .deps/WriteSTL.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteTemplate.lo -MD -MP -MF .deps/WriteTemplate.Tpo -c -o WriteTemplate.lo ../WriteTemplate.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteTemplate.lo -MD -MP -MF .deps/WriteTemplate.Tpo -c ../WriteTemplate.cpp -o WriteTemplate.o
mv -f .deps/WriteTemplate.Tpo .deps/WriteTemplate.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteVtk.lo -MD -MP -MF .deps/WriteVtk.Tpo -c -o WriteVtk.lo ../WriteVtk.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteVtk.lo -MD -MP -MF .deps/WriteVtk.Tpo -c ../WriteVtk.cpp -o WriteVtk.o
mv -f .deps/WriteVtk.Tpo .deps/WriteVtk.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT ReadNCDF.lo -MD -MP -MF .deps/ReadNCDF.Tpo -c -o ReadNCDF.lo ../ReadNCDF.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT ReadNCDF.lo -MD -MP -MF .deps/ReadNCDF.Tpo -c ../ReadNCDF.cpp -o ReadNCDF.o
../ReadNCDF.cpp: In member function ‘MBErrorCode ReadNCDF::update(const char*, const FileOptions&)’:
../ReadNCDF.cpp:1987: warning: ‘op’ may be used uninitialized in this function
../ReadNCDF.cpp:2034: warning: ‘coordz’ may be used uninitialized in this function
../ReadNCDF.cpp:2080: warning: ‘coord3’ may be used uninitialized in this function
mv -f .deps/ReadNCDF.Tpo .deps/ReadNCDF.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteNCDF.lo -MD -MP -MF .deps/WriteNCDF.Tpo -c -o WriteNCDF.lo ../WriteNCDF.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteNCDF.lo -MD -MP -MF .deps/WriteNCDF.Tpo -c ../WriteNCDF.cpp -o WriteNCDF.o
mv -f .deps/WriteNCDF.Tpo .deps/WriteNCDF.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteSLAC.lo -MD -MP -MF .deps/WriteSLAC.Tpo -c -o WriteSLAC.lo ../WriteSLAC.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteSLAC.lo -MD -MP -MF .deps/WriteSLAC.Tpo -c ../WriteSLAC.cpp -o WriteSLAC.o
mv -f .deps/WriteSLAC.Tpo .deps/WriteSLAC.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT ReadHDF5.lo -MD -MP -MF .deps/ReadHDF5.Tpo -c -o ReadHDF5.lo ../ReadHDF5.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT ReadHDF5.lo -MD -MP -MF .deps/ReadHDF5.Tpo -c ../ReadHDF5.cpp -o ReadHDF5.o
mv -f .deps/ReadHDF5.Tpo .deps/ReadHDF5.Plo
/bin/sh ./libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteHDF5.lo -MD -MP -MF .deps/WriteHDF5.Tpo -c -o WriteHDF5.lo ../WriteHDF5.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT WriteHDF5.lo -MD -MP -MF .deps/WriteHDF5.Tpo -c ../WriteHDF5.cpp -o WriteHDF5.o
mv -f .deps/WriteHDF5.Tpo .deps/WriteHDF5.Plo
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o libMOAB.la -rpath /home/jason/moab/test/dist/moab-3.99/_inst/lib AEntityFactory.lo DualTool.lo EntitySequence.lo ExoIIUtil.lo FileOptions.lo FileTokenizer.lo GeomTopoTool.lo HigherOrderFactory.lo HomXform.lo MBAdaptiveKDTree.lo MBAffineXform.lo MBAlloc.lo MBAxisBox.lo MBBits.lo MBBSPTree.lo MBCN.lo MBCartVect.lo MBMatrix3.lo MBCore.lo MBFactory.lo MBGeomUtil.lo MBMeshSet.lo MBOrientedBox.lo MBOrientedBoxTreeTool.lo MBRange.lo MBRangeSeqIntersectIter.lo MBReadUtil.lo MBReaderWriterSet.lo MBSkinner.lo MBSysUtil.lo MBUtil.lo MBWriteUtil.lo MeshSetSequence.lo MeshTopoUtil.lo PolyElementSeq.lo ReadGmsh.lo ReadSms.lo ReadSTL.lo ReadVtk.lo ReadIDEAS.lo ReadTetGen.lo ScdElementData.lo ScdVertexData.lo SequenceData.lo SequenceManager.lo SparseTagSuperCollection.lo SparseTagCollection.lo StructuredElementSeq.lo SweptElementData.lo SweptElementSeq.lo SweptVertexData.lo TagInfo.lo TagServer.lo Tqdcfr.!
lo TypeSequenceManager.lo UnstructuredElemSeq.lo VertexSequence.lo VtkUtil.lo WriteAns.lo WriteGMV.lo WriteGmsh.lo WriteSTL.lo WriteTemplate.lo WriteVtk.lo ReadNCDF.lo WriteNCDF.lo WriteSLAC.lo ReadHDF5.lo WriteHDF5.lo -lnetcdf_c++ -lnetcdf -lhdf5 ./mhdf/libmhdf.la -lm
mkdir .libs
rm -fr .libs/libMOAB.lax
mkdir .libs/libMOAB.lax
rm -fr .libs/libMOAB.lax/libmhdf.a
mkdir .libs/libMOAB.lax/libmhdf.a
(cd .libs/libMOAB.lax/libmhdf.a && ar x /home/jason/moab/test/dist/moab-3.99/_build/./mhdf/.libs/libmhdf.a)
ar cru .libs/libMOAB.a AEntityFactory.o DualTool.o EntitySequence.o ExoIIUtil.o FileOptions.o FileTokenizer.o GeomTopoTool.o HigherOrderFactory.o HomXform.o MBAdaptiveKDTree.o MBAffineXform.o MBAlloc.o MBAxisBox.o MBBits.o MBBSPTree.o MBCN.o MBCartVect.o MBMatrix3.o MBCore.o MBFactory.o MBGeomUtil.o MBMeshSet.o MBOrientedBox.o MBOrientedBoxTreeTool.o MBRange.o MBRangeSeqIntersectIter.o MBReadUtil.o MBReaderWriterSet.o MBSkinner.o MBSysUtil.o MBUtil.o MBWriteUtil.o MeshSetSequence.o MeshTopoUtil.o PolyElementSeq.o ReadGmsh.o ReadSms.o ReadSTL.o ReadVtk.o ReadIDEAS.o ReadTetGen.o ScdElementData.o ScdVertexData.o SequenceData.o SequenceManager.o SparseTagSuperCollection.o SparseTagCollection.o StructuredElementSeq.o SweptElementData.o SweptElementSeq.o SweptVertexData.o TagInfo.o TagServer.o Tqdcfr.o TypeSequenceManager.o UnstructuredElemSeq.o VertexSequence.o VtkUtil.o WriteAns.o WriteGMV.o WriteGmsh.o WriteSTL.o WriteTemplate.o WriteVtk.o ReadNCDF.o WriteNCDF.o WriteSLAC.o R!
eadHDF5.o WriteHDF5.o .libs/libMOAB.lax/libmhdf.a/file-desc.o .libs/libMOAB.lax/libmhdf.a/adjacency.o .libs/libMOAB.lax/libmhdf.a/file-handle.o .libs/libMOAB.lax/libmhdf.a/status.o .libs/libMOAB.lax/libmhdf.a/tags.o .libs/libMOAB.lax/libmhdf.a/file.o .libs/libMOAB.lax/libmhdf.a/nodes.o .libs/libMOAB.lax/libmhdf.a/sets.o .libs/libMOAB.lax/libmhdf.a/connectivity.o .libs/libMOAB.lax/libmhdf.a/util.o
ranlib .libs/libMOAB.a
rm -fr .libs/libMOAB.lax
creating libMOAB.la
(cd .libs && rm -f libMOAB.la && ln -s ../libMOAB.la libMOAB.la)
make[3]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build'
Making all in test
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test'
Making all in dual
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test/dual'
make[4]: Nothing to be done for `all'.
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/test/dual'
Making all in h5file
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test/h5file'
make[4]: Nothing to be done for `all'.
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/test/h5file'
Making all in obb
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test/obb'
make[4]: Nothing to be done for `all'.
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/test/obb'
Making all in perf
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test/perf'
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../test/perf -I../.. -I../../.. -I../../../mhdf/include -I../.. -I../../../tools/iMesh -I../../tools/iMesh -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT point_in_elem.o -MD -MP -MF .deps/point_in_elem.Tpo -c -o point_in_elem.o ../../../test/perf/point_in_elem.cpp
mv -f .deps/point_in_elem.Tpo .deps/point_in_elem.Po
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o point_in_elem point_in_elem.o ../../libMOAB.la -lm
mkdir .libs
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o point_in_elem point_in_elem.o ../../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/test/perf'
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/test'
make[4]: Nothing to be done for `all-am'.
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/test'
make[3]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/test'
Making all in tools
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools'
Making all in iMesh
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
make all-recursive
make[5]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
Making all in .
make[6]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
/bin/sh ../../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DSRCDIR=../../../tools/iMesh -I. -I../../../tools/iMesh -I../.. -I../../.. -I../.. -I. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT iMesh_MOAB.lo -MD -MP -MF .deps/iMesh_MOAB.Tpo -c -o iMesh_MOAB.lo ../../../tools/iMesh/iMesh_MOAB.cpp
c++ -DHAVE_CONFIG_H -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DSRCDIR=../../../tools/iMesh -I. -I../../../tools/iMesh -I../.. -I../../.. -I../.. -I. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT iMesh_MOAB.lo -MD -MP -MF .deps/iMesh_MOAB.Tpo -c ../../../tools/iMesh/iMesh_MOAB.cpp -o iMesh_MOAB.o
../../../tools/iMesh/iMesh_MOAB.cpp: In function ‘void imesh_getentsbytagsrec_(iMesh_Instance_Private*, iBase_EntitySetHandle_Private*, int, int, iBase_TagHandle_Private* const*, const char* const*, int, int, iBase_EntityHandle_Private***, int*, int*, int*)’:
../../../tools/iMesh/iMesh_MOAB.cpp:2752: warning: ‘result’ may be used uninitialized in this function
mv -f .deps/iMesh_MOAB.Tpo .deps/iMesh_MOAB.Plo
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o libiMesh.la -rpath /home/jason/moab/test/dist/moab-3.99/_inst/lib iMesh_MOAB.lo ../../libMOAB.la -lm
mkdir .libs
ar cru .libs/libiMesh.a iMesh_MOAB.o
ranlib .libs/libiMesh.a
creating libiMesh.la
(cd .libs && rm -f libiMesh.la && ln -s ../libiMesh.la libiMesh.la)
make[6]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
make[5]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/iMesh'
Making all in mbperf
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/mbperf'
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I../../../tools/mbperf -I../.. -I../../.. -I../.. -I../../../tools/iMesh -I../../../tools/iMesh/SIDL/mserver -I../iMesh/SIDL/mserver -I../iMesh -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT mbperf.o -MD -MP -MF .deps/mbperf.Tpo -c -o mbperf.o ../../../tools/mbperf/mbperf.cpp
mv -f .deps/mbperf.Tpo .deps/mbperf.Po
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbperf mbperf.o ../../libMOAB.la -lm
mkdir .libs
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbperf mbperf.o ../../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I../../../tools/mbperf -I../.. -I../../.. -I../.. -I../../../tools/iMesh -I../../../tools/iMesh/SIDL/mserver -I../iMesh/SIDL/mserver -I../iMesh -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT mbperf_iMesh.o -MD -MP -MF .deps/mbperf_iMesh.Tpo -c -o mbperf_iMesh.o ../../../tools/mbperf/mbperf_iMesh.cpp
mv -f .deps/mbperf_iMesh.Tpo .deps/mbperf_iMesh.Po
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbperf_iMesh mbperf_iMesh.o ../../libMOAB.la ../iMesh/libiMesh.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbperf_iMesh mbperf_iMesh.o ../../.libs/libMOAB.a ../iMesh/.libs/libiMesh.a /home/jason/moab/test/dist/moab-3.99/_build/.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/mbperf'
Making all in dagmc
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/dagmc'
/bin/sh ../../libtool --tag=CXX --mode=compile c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/dagmc -I../.. -I../../.. -I../.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT DagMC.lo -MD -MP -MF .deps/DagMC.Tpo -c -o DagMC.lo ../../../tools/dagmc/DagMC.cpp
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../../tools/dagmc -I../.. -I../../.. -I../.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT DagMC.lo -MD -MP -MF .deps/DagMC.Tpo -c ../../../tools/dagmc/DagMC.cpp -o DagMC.o
../../../tools/dagmc/DagMC.cpp: In member function ‘void DagMC::write_log(std::string, bool)’:
../../../tools/dagmc/DagMC.cpp:1062: warning: unused variable ‘success’
mv -f .deps/DagMC.Tpo .deps/DagMC.Plo
/bin/sh ../../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o libdagmc.la -rpath /home/jason/moab/test/dist/moab-3.99/_inst/lib DagMC.lo -lm
mkdir .libs
ar cru .libs/libdagmc.a DagMC.o
ranlib .libs/libdagmc.a
creating libdagmc.la
(cd .libs && rm -f libdagmc.la && ln -s ../libdagmc.la libdagmc.la)
make[4]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build/tools/dagmc'
make[4]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build/tools'
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../tools -I.. -I../.. -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT convert.o -MD -MP -MF .deps/convert.Tpo -c -o convert.o ../../tools/convert.cpp
mv -f .deps/convert.Tpo .deps/convert.Po
/bin/sh ../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbconvert convert.o ../libMOAB.la -lm
mkdir .libs
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbconvert convert.o ../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../tools -I.. -I../.. -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT makeops.o -MD -MP -MF .deps/makeops.Tpo -c -o makeops.o ../../tools/makeops.cpp
mv -f .deps/makeops.Tpo .deps/makeops.Po
/bin/sh ../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o hexmodops makeops.o ../libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o hexmodops makeops.o ../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../tools -I.. -I../.. -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT measure.o -MD -MP -MF .deps/measure.Tpo -c -o measure.o ../../tools/measure.cpp
mv -f .deps/measure.Tpo .deps/measure.Po
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../tools -I.. -I../.. -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT size.o -MD -MP -MF .deps/size.Tpo -c -o size.o ../../tools/size.cpp
mv -f .deps/size.Tpo .deps/size.Po
/bin/sh ../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbsize measure.o size.o ../libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbsize measure.o size.o ../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../tools -I.. -I../.. -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT skin.o -MD -MP -MF .deps/skin.Tpo -c -o skin.o ../../tools/skin.cpp
mv -f .deps/skin.Tpo .deps/skin.Po
/bin/sh ../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbskin skin.o ../libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbskin skin.o ../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../tools -I.. -I../.. -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT parse.o -MD -MP -MF .deps/parse.Tpo -c -o parse.o ../../tools/parse.cpp
mv -f .deps/parse.Tpo .deps/parse.Po
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../tools -I.. -I../.. -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT propagate_tags.o -MD -MP -MF .deps/propagate_tags.Tpo -c -o propagate_tags.o ../../tools/propagate_tags.cpp
../../tools/propagate_tags.cpp: In function ‘int main(int, char**)’:
../../tools/propagate_tags.cpp:193: warning: ‘data_tag.TagSpec::handle’ may be used uninitialized in this function
../../tools/propagate_tags.cpp:193: warning: ‘data_tag.TagSpec::value’ may be used uninitialized in this function
mv -f .deps/propagate_tags.Tpo .deps/propagate_tags.Po
/bin/sh ../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbtagprop parse.o propagate_tags.o ../libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbtagprop parse.o propagate_tags.o ../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../tools -I.. -I../.. -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT SphereDecomp.o -MD -MP -MF .deps/SphereDecomp.Tpo -c -o SphereDecomp.o ../../tools/SphereDecomp.cpp
mv -f .deps/SphereDecomp.Tpo .deps/SphereDecomp.Po
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../tools -I.. -I../.. -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT main.o -MD -MP -MF .deps/main.Tpo -c -o main.o ../../tools/main.cpp
mv -f .deps/main.Tpo .deps/main.Po
/bin/sh ../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o spheredecomp SphereDecomp.o main.o ../libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o spheredecomp SphereDecomp.o main.o ../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../tools -I.. -I../.. -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT surfplot.o -MD -MP -MF .deps/surfplot.Tpo -c -o surfplot.o ../../tools/surfplot.cpp
mv -f .deps/surfplot.Tpo .deps/surfplot.Po
/bin/sh ../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbsurfplot surfplot.o ../libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbsurfplot surfplot.o ../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -I. -I../../tools -I.. -I../.. -I.. -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -Wall -pipe -pedantic -O2 -DNDEBUG -MT gsets.o -MD -MP -MF .deps/gsets.Tpo -c -o gsets.o ../../tools/gsets.cc
mv -f .deps/gsets.Tpo .deps/gsets.Po
/bin/sh ../libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbgsets gsets.o ../libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o mbgsets gsets.o ../.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
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make moab_test homxform_test scdseq_test tqdcfr test_adj seq_man_test geom_util_test xform_test obb_test vtk_test adaptive_kd_tree_tests bsp_tree_test file_options_test kd_tree_test var_len_test var_len_test_no_template tag_test mesh_set_test cub_file_test exodus_test mbcn_test kd_tree_tool kd_tree_time
make[3]: Entering directory `/home/jason/moab/test/dist/moab-3.99/_build'
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT MBTest.o -MD -MP -MF .deps/MBTest.Tpo -c -o MBTest.o ../MBTest.cpp
../MBTest.cpp: In function ‘MBErrorCode mb_temporary_test(MBInterface*)’:
../MBTest.cpp:659: warning: unused variable ‘num_adj’
mv -f .deps/MBTest.Tpo .deps/MBTest.Po
gunzip -c ../test/mb_big_test.g.gz > test/mb_big_test.g
gunzip -c ../test/cell1.gen.gz > test/cell1.gen
gunzip -c ../test/cell2.gen.gz > test/cell2.gen
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o moab_test MBTest.o ./libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o moab_test MBTest.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -DTEST -Wall -pipe -pedantic -O2 -DNDEBUG -Wall -pipe -pedantic -O2 -DNDEBUG -MT homxform_test-HomXform.o -MD -MP -MF .deps/homxform_test-HomXform.Tpo -c -o homxform_test-HomXform.o `test -f 'HomXform.cpp' || echo '../'`HomXform.cpp
mv -f .deps/homxform_test-HomXform.Tpo .deps/homxform_test-HomXform.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -DTEST -Wall -pipe -pedantic -O2 -DNDEBUG -Wall -pipe -pedantic -O2 -DNDEBUG -o homxform_test homxform_test-HomXform.o ./libMOAB.la -lm
c++ -DTEST -Wall -pipe -pedantic -O2 -DNDEBUG -Wall -pipe -pedantic -O2 -DNDEBUG -o homxform_test homxform_test-HomXform.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT scdseq_test.o -MD -MP -MF .deps/scdseq_test.Tpo -c -o scdseq_test.o ../scdseq_test.cpp
../scdseq_test.cpp: In function ‘MBErrorCode evaluate_element_sequence(StructuredElementSeq*)’:
../scdseq_test.cpp:210: warning: ‘ktmp’ may be used uninitialized in this function
../scdseq_test.cpp:210: warning: ‘jtmp’ may be used uninitialized in this function
../scdseq_test.cpp:210: warning: ‘itmp’ may be used uninitialized in this function
../scdseq_test.cpp: In function ‘MBErrorCode evaluate_vertex_sequence(ScdVertexData*)’:
../scdseq_test.cpp:153: warning: ‘ktmp’ may be used uninitialized in this function
../scdseq_test.cpp:153: warning: ‘jtmp’ may be used uninitialized in this function
../scdseq_test.cpp:153: warning: ‘itmp’ may be used uninitialized in this function
mv -f .deps/scdseq_test.Tpo .deps/scdseq_test.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o scdseq_test scdseq_test.o ./libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o scdseq_test scdseq_test.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -DTEST_TQDCFR -Wall -pipe -pedantic -O2 -DNDEBUG -Wall -pipe -pedantic -O2 -DNDEBUG -MT tqdcfr-Tqdcfr.o -MD -MP -MF .deps/tqdcfr-Tqdcfr.Tpo -c -o tqdcfr-Tqdcfr.o `test -f 'Tqdcfr.cpp' || echo '../'`Tqdcfr.cpp
mv -f .deps/tqdcfr-Tqdcfr.Tpo .deps/tqdcfr-Tqdcfr.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -DTEST_TQDCFR -Wall -pipe -pedantic -O2 -DNDEBUG -Wall -pipe -pedantic -O2 -DNDEBUG -o tqdcfr tqdcfr-Tqdcfr.o ./libMOAB.la -lm
c++ -DTEST_TQDCFR -Wall -pipe -pedantic -O2 -DNDEBUG -Wall -pipe -pedantic -O2 -DNDEBUG -o tqdcfr tqdcfr-Tqdcfr.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT test_adj.o -MD -MP -MF .deps/test_adj.Tpo -c -o test_adj.o ../test_adj.cpp
mv -f .deps/test_adj.Tpo .deps/test_adj.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o test_adj test_adj.o ./libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o test_adj test_adj.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT TestTypeSequenceManager.o -MD -MP -MF .deps/TestTypeSequenceManager.Tpo -c -o TestTypeSequenceManager.o ../TestTypeSequenceManager.cpp
mv -f .deps/TestTypeSequenceManager.Tpo .deps/TestTypeSequenceManager.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o seq_man_test TestTypeSequenceManager.o ./libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o seq_man_test TestTypeSequenceManager.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT GeomUtilTests.o -MD -MP -MF .deps/GeomUtilTests.Tpo -c -o GeomUtilTests.o ../GeomUtilTests.cpp
mv -f .deps/GeomUtilTests.Tpo .deps/GeomUtilTests.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o geom_util_test GeomUtilTests.o ./libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o geom_util_test GeomUtilTests.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -DTEST -Wall -pipe -pedantic -O2 -DNDEBUG -Wall -pipe -pedantic -O2 -DNDEBUG -MT xform_test-MBAffineXform.o -MD -MP -MF .deps/xform_test-MBAffineXform.Tpo -c -o xform_test-MBAffineXform.o `test -f 'MBAffineXform.cpp' || echo '../'`MBAffineXform.cpp
mv -f .deps/xform_test-MBAffineXform.Tpo .deps/xform_test-MBAffineXform.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -DTEST -Wall -pipe -pedantic -O2 -DNDEBUG -Wall -pipe -pedantic -O2 -DNDEBUG -o xform_test xform_test-MBAffineXform.o ./libMOAB.la -lm
c++ -DTEST -Wall -pipe -pedantic -O2 -DNDEBUG -Wall -pipe -pedantic -O2 -DNDEBUG -o xform_test xform_test-MBAffineXform.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT OBBTest.o -MD -MP -MF .deps/OBBTest.Tpo -c -o OBBTest.o ../OBBTest.cpp
mv -f .deps/OBBTest.Tpo .deps/OBBTest.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o obb_test OBBTest.o ./libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o obb_test OBBTest.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT VtkTest.o -MD -MP -MF .deps/VtkTest.Tpo -c -o VtkTest.o ../VtkTest.cpp
mv -f .deps/VtkTest.Tpo .deps/VtkTest.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o vtk_test VtkTest.o ./libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o vtk_test VtkTest.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT adaptive_kd_tree_tests.o -MD -MP -MF .deps/adaptive_kd_tree_tests.Tpo -c -o adaptive_kd_tree_tests.o ../adaptive_kd_tree_tests.cpp
../adaptive_kd_tree_tests.cpp: In function ‘bool create_simple_2d_tree(MBAdaptiveKDTree&, MBEntityHandle&, MBEntityHandle*)’:
../adaptive_kd_tree_tests.cpp:416: warning: unused variable ‘mb’
mv -f .deps/adaptive_kd_tree_tests.Tpo .deps/adaptive_kd_tree_tests.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o adaptive_kd_tree_tests adaptive_kd_tree_tests.o ./libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o adaptive_kd_tree_tests adaptive_kd_tree_tests.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT bsp_tree_test.o -MD -MP -MF .deps/bsp_tree_test.Tpo -c -o bsp_tree_test.o ../bsp_tree_test.cpp
mv -f .deps/bsp_tree_test.Tpo .deps/bsp_tree_test.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o bsp_tree_test bsp_tree_test.o ./libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o bsp_tree_test bsp_tree_test.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DTEST -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT file_options_test-FileOptions.o -MD -MP -MF .deps/file_options_test-FileOptions.Tpo -c -o file_options_test-FileOptions.o `test -f 'FileOptions.cpp' || echo '../'`FileOptions.cpp
mv -f .deps/file_options_test-FileOptions.Tpo .deps/file_options_test-FileOptions.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o file_options_test file_options_test-FileOptions.o -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o file_options_test file_options_test-FileOptions.o -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT kd_tree_test.o -MD -MP -MF .deps/kd_tree_test.Tpo -c -o kd_tree_test.o ../kd_tree_test.cpp
../kd_tree_test.cpp: In function ‘int main()’:
../kd_tree_test.cpp:71: warning: unused variable ‘volume’
../kd_tree_test.cpp:160: warning: unused variable ‘volume’
../kd_tree_test.cpp:78: warning: unused variable ‘num_leaves’
mv -f .deps/kd_tree_test.Tpo .deps/kd_tree_test.Po
/bin/sh ./libtool --tag=CXX --mode=link c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o kd_tree_test kd_tree_test.o ./libMOAB.la -lm
c++ -Wall -pipe -pedantic -O2 -DNDEBUG -o kd_tree_test kd_tree_test.o ./.libs/libMOAB.a -lnetcdf_c++ -lnetcdf /usr/lib/libhdf5.so -lpthread -lz -lm
c++ -DTEMPLATE_SPECIALIZATION -DTEMPLATE_FUNC_SPECIALIZATION -DHDF5_FILE -DNETCDF_FILE -DIS_BUILDING_MB -I. -I.. -I. -I../mhdf/include -DUNORDERED_MAP_NS=std::tr1 -DHAVE_UNORDERED_MAP=tr1/unordered_map -DSRCDIR=.. -Wall -pipe -pedantic -O2 -DNDEBUG -MT VarLenTagTest.o -MD -MP -MF .deps/VarLenTagTest.Tpo -c -o VarLenTagTest.o ../VarLenTagTest.cpp
In file included from ../VarLenTagTest.cpp:1:
../TestUtil.hpp:530: error: expected unqualified-id before ‘<’ token
../TestUtil.hpp:530: error: expected ‘,’ or ‘...’ before ‘<’ token
../TestUtil.hpp: In function ‘void check_equal()’:
../TestUtil.hpp:534: error: ‘A’ was not declared in this scope
../TestUtil.hpp:534: error: ‘B’ was not declared in this scope
../TestUtil.hpp:534: error: ‘sA’ was not declared in this scope
../TestUtil.hpp:534: error: ‘sB’ was not declared in this scope
../TestUtil.hpp:534: error: ‘line’ was not declared in this scope
../TestUtil.hpp:534: error: ‘file’ was not declared in this scope
make[3]: *** [VarLenTagTest.o] Error 1
make[3]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build'
make[2]: *** [check-am] Error 2
make[2]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build'
make[1]: *** [check-recursive] Error 1
make[1]: Leaving directory `/home/jason/moab/test/dist/moab-3.99/_build'
make: *** [distcheck] Error 2
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