[ExM Users] Installing Swift/T on Raven

Tue Apr 16 16:32:19 CDT 2013

I missed that note about blob.h .  That is just a warning, as far as I 
know it does not hurt anything.

On 04/12/2013 03:02 PM, Scott Krieder wrote:
> Hi Justin,
>
> For ADLB it doesn't recognize --with-mpi or --with-mpi-dir in the 
> configure file. So I pointed both flags to use the default:
> ./configure --prefix=/home/users/p01684/Public/sfw/lb CC=gcc 
> CFLAGS=-I/opt/cray/mpt/default/gni/mpich2-gnu/46/include 
> LDFLAGS="-L/opt/cray/mpt/default/gni/mpich2-gnu/46/lib -lmpich" 
> --with-c-utils=/home/users/p01684/Public/sfw/c-utils
>
> I modified the Makefile and swapped gcc for two instances of mpicc.
>
> I then installed SWIG from source with the configuration:
> *
>
> ./configure --prefix=/home/users/p01684/Public/sfw/swig --without-pcre
>
> *
>
> I configure turbine with:
>
> ./configure --prefix=/home/users/p01684/Public/sfw/turbine 
> --with-mpi=/opt/cray/mpt/default/gni/mpich2-gnu/46
>
>
> However on "make package" there is an error with one of the blob 
> header files:
> p01684 at raven:~/exm/turbine/trunk/code> make package SWIG 
> src/tcl/blob/SwiftBlob.i src/tcl/blob/blob.h:25: Warning 201: Unable 
> to find 'stdbool.h'
>
> Do you know if there is a module I can load so swig can find the 
> stdbool.h?
>
> Thank you,
> Scott
>
>
>
> On Fri, Apr 12, 2013 at 1:44 PM, Justin M Wozniak <wozniak at mcs.anl.gov 
> <mailto:wozniak at mcs.anl.gov>> wrote:
>
>
>     That configure line points --prefix= ... /c-utils
>
>     Also, CFLAGS=-I... should point to an include directory.
>
>     Try setting
>
>     --with-mpi=/opt/cray/mpt/default/gni/mpich2-gnu/46
>
>     and let me know what happens.  I will try to get on Raven soon to
>     test this.
>
>     On 04/12/2013 12:57 PM, Scott Krieder wrote:
>>     Hi Justin,
>>
>>     This is from a tarball from my machine where GeMTC and Swift are
>>     working, I haven't updated past version 6770. Sorry to bounce
>>     around with errors but I believe I had an earlier issue with the
>>     c-utils/adlb install that lead to this turbine issue. When
>>     configuring adlb I point it at the c-utils install and I get an
>>     error regarding the MPI version.
>>
>>     I'm running:
>>     ./configure --prefix=/home/users/p01684/Public/c-utils CC=gcc
>>     --with-c-utils=/home/users/p01684/Public/sfw/c-utils
>>     CFLAGS=-I/opt/cray/mpt/default/gni/mpich2-gnu/46
>>     LDFLAGS="-L/opt/cray/mpt/default/gni/mpich2-gnu/46/lib -lmpich"
>>
>>     I noticed that there are many folders in:
>>     /opt/cray/mpt/
>>
>>     Is there a good way to identify which version I should use within
>>     /opt/cray/mpt? Or am I wrong in assuming that this versioning is
>>     what is causing the "Could not preprocess maint/mpi_version.cpp"
>>     error?
>>
>>     Thanks,
>>     Scott
>>
>>     ==error message==
>>     checking for cp that supports -u... yes
>>     using MPE: no
>>     checking for
>>     /home/users/p01684/Public/sfw/c-utils/include/c-utils.h... yes
>>     using ExM c-utils in /home/users/p01684/Public/sfw/c-utils ...
>>     checking MPI version... maint/mpi_version.cpp:23:17: error:
>>     mpi.h: No such file or directory
>>     configure: error: Could not preprocess maint/mpi_version.cpp
>>
>>
>>
>>     On Fri, Apr 12, 2013 at 11:28 AM, Justin M Wozniak
>>     <wozniak at mcs.anl.gov <mailto:wozniak at mcs.anl.gov>> wrote:
>>
>>         Hi
>>
>>         Is this with trunk or with the release package?
>>
>>         --with-mpi-dir may have been replaced by --with-mpi
>>
>>             Justin
>>
>>
>>         On 04/12/2013 11:05 AM, Scott Krieder wrote:
>>>         Hi All,
>>>
>>>         I'm trying to install Swift/T on Raven. I followed the notes
>>>         about Cray systems.
>>>
>>>         When I configure turbine with:
>>>         ./configure --prefix=/home/users/p01684/Public/sfw/turbine
>>>         --enable-custom
>>>         --with-mpi-dir=/opt/cray/mpt/default/xt/gemini/mpich2-gnu/46
>>>
>>>         I get a long error about "could not find directory" in
>>>         reference to mpicc. Is there something I should do in
>>>         addition to the --with-mpi flag?
>>>
>>>         Thanks,
>>>         Scott
>>>
>>>         ==Error Message==
>>>         checking for
>>>         /ufs/home/users/p01684/Public/sfw/c-utils/include/c-utils.h...
>>>         yes
>>>         which: no mpicc in
>>>         (/opt/pbs/10.4.0.101257/bin:/opt/cray/atp/1.6.2/bin:/opt/cray/rca/1.0.0-2.0401.38656.2.2.gem/bin:/opt/cray/pmi/4.0.1-1.0000.9421.73.3.gem/bin:/opt/toolworks/totalview.8.11.0-1/bin:/opt/totalview-support/1.1.4/bin:/opt/cray/cce/8.1.4/cray-binutils/x86_64-unknown-linux-gnu/bin:/opt/cray/cce/8.1.4/craylibs/x86-64/bin:/opt/cray/cce/8.1.4/cftn/bin:/opt/cray/cce/8.1.4/CC/bin:/opt/cray/xt-asyncpe/5.20.11/bin:/opt/cray/llm/default/bin:/opt/cray/llm/default/etc:/opt/cray/xpmem/0.1-2.0401.36790.4.3.gem/bin:/opt/cray/dmapp/3.2.1-1.0401.5983.4.5.gem/bin:/opt/cray/ugni/4.0-1.0401.5928.9.5.gem/bin:/opt/cray/udreg/2.3.2-1.0401.5929.3.3.gem/bin:/opt/cray/lustre-cray_gem_s/1.8.6_2.6.32.59_0.7.1_1.0401.6845.9.1-1.0401.38658.11.3/sbin:/opt/cray/lustre-cray_gem_s/1.8.6_2.6.32.59_0.7.1_1.0401.6845.9.1-1.0401.38658.11.3/bin:/opt/cray/MySQL/5.0.64-1.0000.5053.22.1/sbin:/opt/cray/MySQL/5.0.64-1.0000.5053.22.1/bin:/opt/cray/sdb/1.0-1.0401.38148.4.27.gem/bin:/opt/cray/nodestat/2.
>>>         2-1.0401. 37252.2.1.gem /bin:/opt
>>>         /modules/3.2.6.7/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:.:/usr/lib/qt3/bin:/opt/cray/bin
>>>         <http://3.2.6.7/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:.:/usr/lib/qt3/bin:/opt/cray/bin>)
>>>         ./configure: line 4032: ((: !  : syntax error: operand
>>>         expected (error token is " ")
>>>         checking for 0... no
>>>         configure: error: Could not find directory
>>>
>>>
>>>         -- 
>>>         Scott J. Krieder
>>>         C: 419-685-0410 <tel:419-685-0410>
>>>         E: skrieder at iit.edu <mailto:skrieder at iit.edu>
>>>         http://datasys.cs.iit.edu/~skrieder/
>>>         <http://datasys.cs.iit.edu/%7Eskrieder/>
>>>
>>>
>>>         _______________________________________________
>>>         ExM-user mailing list
>>>         ExM-user at lists.mcs.anl.gov  <mailto:ExM-user at lists.mcs.anl.gov>
>>>         https://lists.mcs.anl.gov/mailman/listinfo/exm-user
>>
>>
>>         -- 
>>         Justin M Wozniak
>>
>>
>>         _______________________________________________
>>         ExM-user mailing list
>>         ExM-user at lists.mcs.anl.gov <mailto:ExM-user at lists.mcs.anl.gov>
>>         https://lists.mcs.anl.gov/mailman/listinfo/exm-user
>>
>>
>>
>>
>>     -- 
>>     Scott J. Krieder
>>     C: 419-685-0410 <tel:419-685-0410>
>>     E: skrieder at iit.edu <mailto:skrieder at iit.edu>
>>     http://datasys.cs.iit.edu/~skrieder/
>>     <http://datasys.cs.iit.edu/%7Eskrieder/>
>
>
>     -- 
>     Justin M Wozniak
>
>
>
>
> -- 
> Scott J. Krieder
> C: 419-685-0410
> E: skrieder at iit.edu <mailto:skrieder at iit.edu>
> http://datasys.cs.iit.edu/~skrieder/ 
> <http://datasys.cs.iit.edu/%7Eskrieder/>

-- 
Justin M Wozniak

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