[ExM Users] Installing Swift/T on Raven

Michael Wilde wilde at mcs.anl.gov
Mon Apr 15 22:43:29 CDT 2013


Scott,

Were you able to get Swift/T running on Raven?

If so, which version, and do you have an install there that I can use for my own tests (and to help get a demo ready and tested for Cray?)

Tim, Justin, can you point me to a suggested Swift/T toolset on Beagle?

Thanks,

- Mike


----- Original Message -----
> From: "Scott Krieder" <skrieder at iit.edu>
> To: "Justin M Wozniak" <wozniak at mcs.anl.gov>
> Cc: exm-user at lists.mcs.anl.gov
> Sent: Friday, April 12, 2013 3:02:04 PM
> Subject: Re: [ExM Users] Installing Swift/T on Raven
> 
> 
> 
> Hi Justin,
> 
> 
> 
> For ADLB it doesn't recognize --with-mpi or --with-mpi-dir in the
> configure file. So I pointed both flags to use the default:
> ./configure --prefix=/home/users/p01684/Public/sfw/lb CC=gcc
> CFLAGS=-I/opt/cray/mpt/default/gni/mpich2-gnu/46/include
> LDFLAGS="-L/opt/cray/mpt/default/gni/mpich2-gnu/46/lib -lmpich"
> --with-c-utils=/home/users/p01684/Public/sfw/c-utils
> 
> 
> 
> I modified the Makefile and swapped gcc for two instances of mpicc.
> 
> 
> I then installed SWIG from source with the configuration:
> 
> 
> ./configure --prefix=/home/users/p01684/Public/sfw/swig
> --without-pcre
> 
> 
> I configure turbine with:
> 
> 
> ./configure --prefix=/home/users/p01684/Public/sfw/turbine
> --with-mpi=/opt/cray/mpt/default/gni/mpich2-gnu/46
> 
> 
> However on "make package" there is an error with one of the blob
> header files:
> p01684 at raven:~/exm/turbine/trunk/code> make package SWIG
> src/tcl/blob/SwiftBlob.i src/tcl/blob/blob.h:25: Warning 201: Unable
> to find 'stdbool.h'
> 
> 
> 
> Do you know if there is a module I can load so swig can find the
> stdbool.h?
> 
> 
> Thank you,
> Scott
> 
> 
> 
> 
> 
> On Fri, Apr 12, 2013 at 1:44 PM, Justin M Wozniak <
> wozniak at mcs.anl.gov > wrote:
> 
> 
> 
> 
> 
> That configure line points --prefix= ... /c-utils
> 
> Also, CFLAGS=-I... should point to an include directory.
> 
> Try setting
> 
> --with-mpi=/opt/cray/mpt/default/gni/mpich2-gnu/46
> 
> and let me know what happens. I will try to get on Raven soon to test
> this.
> 
> 
> 
> On 04/12/2013 12:57 PM, Scott Krieder wrote:
> 
> 
> 
> 
> 
> 
> 
> Hi Justin,
> 
> This is from a tarball from my machine where GeMTC and Swift are
> working, I haven't updated past version 6770. Sorry to bounce around
> with errors but I believe I had an earlier issue with the
> c-utils/adlb install that lead to this turbine issue. When
> configuring adlb I point it at the c-utils install and I get an
> error regarding the MPI version.
> 
> I'm running:
> ./configure --prefix=/home/users/p01684/Public/c-utils CC=gcc
> --with-c-utils=/home/users/p01684/Public/sfw/c-utils
> CFLAGS=-I/opt/cray/mpt/default/gni/mpich2-gnu/46
> LDFLAGS="-L/opt/cray/mpt/default/gni/mpich2-gnu/46/lib -lmpich"
> 
> I noticed that there are many folders in:
> /opt/cray/mpt/
> 
> Is there a good way to identify which version I should use within
> /opt/cray/mpt? Or am I wrong in assuming that this versioning is
> what is causing the "Could not preprocess maint/mpi_version.cpp"
> error?
> 
> Thanks,
> Scott
> 
> ==error message==
> checking for cp that supports -u... yes
> using MPE: no
> checking for
> /home/users/p01684/Public/sfw/c-utils/include/c-utils.h... yes
> using ExM c-utils in /home/users/p01684/Public/sfw/c-utils ...
> checking MPI version... maint/mpi_version.cpp:23:17: error: mpi.h: No
> such file or directory
> configure: error: Could not preprocess maint/mpi_version.cpp
> 
> 
> 
> 
> 
> 
> 
> On Fri, Apr 12, 2013 at 11:28 AM, Justin M Wozniak <
> wozniak at mcs.anl.gov > wrote:
> 
> 
> 
> 
> 
> 
> Hi
> 
> Is this with trunk or with the release package?
> 
> --with-mpi-dir may have been replaced by --with-mpi
> 
> Justin
> 
> 
> On 04/12/2013 11:05 AM, Scott Krieder wrote:
> 
> 
> 
> 
> 
> 
> Hi All,
> 
> 
> I'm trying to install Swift/T on Raven. I followed the notes about
> Cray systems.
> 
> 
> When I configure turbine with:
> ./configure --prefix=/home/users/p01684/Public/sfw/turbine
> --enable-custom
> --with-mpi-dir=/opt/cray/mpt/default/xt/gemini/mpich2-gnu/46
> 
> 
> 
> I get a long error about "could not find directory" in reference to
> mpicc. Is there something I should do in addition to the --with-mpi
> flag?
> 
> 
> Thanks,
> Scott
> 
> 
> ==Error Message==
> 
> checking for
> /ufs/home/users/p01684/Public/sfw/c-utils/include/c-utils.h... yes
> which: no mpicc in
> (/opt/pbs/10.4.0.101257/bin:/opt/cray/atp/1.6.2/bin:/opt/cray/rca/1.0.0-2.0401.38656.2.2.gem/bin:/opt/cray/pmi/4.0.1-1.0000.9421.73.3.gem/bin:/opt/toolworks/totalview.8.11.0-1/bin:/opt/totalview-support/1.1.4/bin:/opt/cray/cce/8.1.4/cray-binutils/x86_64-unknown-linux-gnu/bin:/opt/cray/cce/8.1.4/craylibs/x86-64/bin:/opt/cray/cce/8.1.4/cftn/bin:/opt/cray/cce/8.1.4/CC/bin:/opt/cray/xt-asyncpe/5.20.11/bin:/opt/cray/llm/default/bin:/opt/cray/llm/default/etc:/opt/cray/xpmem/0.1-2.0401.36790.4.3.gem/bin:/opt/cray/dmapp/3.2.1-1.0401.5983.4.5.gem/bin:/opt/cray/ugni/4.0-1.0401.5928.9.5.gem/bin:/opt/cray/udreg/2.3.2-1.0401.5929.3.3.gem/bin:/opt/cray/lustre-cray_gem_s/1.8.6_2.6.32.59_0.7.1_1.0401.6845.9.1-1.0401.38658.11.3/sbin:/opt/cray/lustre-cray_gem_s/1.8.6_2.6.32.59_0.7.1_1.0401.6845.9.1-1.0401.38658.11.3/bin:/opt/cray/MySQL/5.0.64-1.0000.5053.22.1/sbin:/opt/cray/MySQL/5.0.64-1.0000.5053.22.1/bin:/opt/cray/sdb/1.0-1.0401.38148.4.27.gem/bin:/opt/cray/nodestat/2.
> 2-1.0401. 37252.2.1.gem /bin:/opt /modules/
> 3.2.6.7/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:.:/usr/lib/qt3/bin:/opt/cray/bin
> )
> 
> 
> ./configure: line 4032: ((: ! : syntax error: operand expected (error
> token is " ")
> checking for 0... no
> configure: error: Could not find directory
> 
> 
> 
> 
> 
> --
> Scott J. Krieder
> 
> 
> C: 419-685-0410
> 
> E: skrieder at iit.edu
> 
> http://datasys.cs.iit.edu/~skrieder/
> 
> 
> _______________________________________________
> ExM-user mailing list ExM-user at lists.mcs.anl.gov
> https://lists.mcs.anl.gov/mailman/listinfo/exm-user
> 
> --
> Justin M Wozniak
> 
> _______________________________________________
> ExM-user mailing list
> ExM-user at lists.mcs.anl.gov
> https://lists.mcs.anl.gov/mailman/listinfo/exm-user
> 
> 
> 
> 
> 
> 
> --
> Scott J. Krieder
> 
> 
> C: 419-685-0410
> 
> E: skrieder at iit.edu
> 
> http://datasys.cs.iit.edu/~skrieder/
> 
> --
> Justin M Wozniak
> 
> 
> 
> --
> Scott J. Krieder
> 
> 
> C: 419-685-0410
> 
> E: skrieder at iit.edu
> 
> http://datasys.cs.iit.edu/~skrieder/
> _______________________________________________
> ExM-user mailing list
> ExM-user at lists.mcs.anl.gov
> https://lists.mcs.anl.gov/mailman/listinfo/exm-user
> 


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