[cgma-dev] buildbot failure in cgm-occ-par: failed test

Wed Oct 17 09:52:58 CDT 2012

Hi Jane, 
Buildbot is doing a make distclean every time. The problem with this and with one moab test and some meshkit tests was the local 
LD_LIBRARY_PATH. 

This should not be a problem, but cgma has some path issues. 

LD path was pointing to cubit 13.1, and it got mixed up. The buildbot main builds are now with cubit 12.2, cubit merge12.2 branch of cgm 
The trunk is tested only against occ 653, shared and static, serial. 

Tonight these should not be a problem, I removed the cubit path references from the .bashrc of fathom account. 

If we are going to support both (cubit 12 and cubit 13) for a while, it would be a good idea to remove it from .bashrc (PATH and LD_LIBRARY_PATH). Set it only when needed to the required version of cubit. 

Iulian 

----- Original Message -----

| Do a 'make distclean' may clear the problems.

| Jane

| On Wed, Oct 17, 2012 at 12:30 AM, < cgma-dev at mcs.anl.gov > wrote:

| | Fathom : cgm-occ-par build #38

| | Results: failed test

| | Buildslave: gnep

| | Revision: None

| | Reason: The Nightly scheduler named 'cgm-occ-par-nightly' triggered
| | this build Log Excerpt

| | Making check in OCC

| | make[3]: Entering directory
| | `/disks/itaps-buildslave/cgm-occ-par/build/geom/OCC'

| | make[3]: Nothing to be done for `check'.

| | ...Making check in init

| | make[2]: Entering directory
| | `/disks/itaps-buildslave/cgm-occ-par/build/init'

| | make[2]: Nothing to be done for `check'.

| | ...Making check in .

| | make[2]: Entering directory
| | `/disks/itaps-buildslave/cgm-occ-par/build'

| | make[2]: Nothing to be done for `check-am'.

| | ...Making check in itaps

| | make[2]: Entering directory
| | `/disks/itaps-buildslave/cgm-occ-par/build/itaps'

| | make check-recursive

| | make[3]: Entering directory
| | `/disks/itaps-buildslave/cgm-occ-par/build/itaps'

| | Making check in .

| | make[4]: Entering directory
| | `/disks/itaps-buildslave/cgm-occ-par/build/itaps'

| | make chaman test_edge_orient testgeom_occ copy_attrib partest

| | make[5]: Entering directory
| | `/disks/itaps-buildslave/cgm-occ-par/build/itaps'

| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx
| | -DHAVE_CONFIG_H -I. -I.. -I../geom/parallel -I../geom
| | -DLITTLE_ENDIAN=BYTE_ORDER -DTEMPLATE_DEFS_INCLUDED -DHAVE_OCC
| | -DHAVE_OCC_IGES -DHAVE_OCC_STEP -DHAVE_OCC_STL -DSRCDIR=. -I../util
| | -I../geom -I../init -I../geom/parallel -DUSE_MPI -DFORCE_OCC -Wall
| | -pipe -pedantic -O2 -DNDEBUG -MT partest-partest.o -MD -MP -MF
| | .deps/partest-partest.Tpo -c -o partest-partest.o `test -f
| | 'partest.cpp' || echo './'`partest.cpp

| | In file included from ../geom/parallel/CGMmpi.h:11,

| | from partest.cpp:15:

| | /home/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/include/mpi.h:373:
| | warning: ISO C++ 1998 does not support ‘long long’

| | partest.cpp: In function ‘int main(int, char**)’:

| | partest.cpp:72: warning: ‘rss_before’ may be used uninitialized in
| | this function

| | partest.cpp:72: warning: ‘size_before’ may be used uninitialized in
| | this function

| | mv -f .deps/partest-partest.Tpo .deps/partest-partest.Po

| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx
| | -DHAVE_CONFIG_H -I. -I.. -I../geom/parallel -I../geom
| | -DLITTLE_ENDIAN=BYTE_ORDER -DTEMPLATE_DEFS_INCLUDED -DHAVE_OCC
| | -DHAVE_OCC_IGES -DHAVE_OCC_STEP -DHAVE_OCC_STL -DSRCDIR=. -I../util
| | -I../geom -I../init -I../geom/parallel -DUSE_MPI -Wall -pipe
| | -pedantic
| | -O2 -DNDEBUG -MT chaman.o -MD -MP -MF .deps/chaman.Tpo -c -o
| | chaman.o
| | chaman.cc

| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx
| | -DHAVE_CONFIG_H -I. -I.. -I../geom/parallel -I../geom
| | -DLITTLE_ENDIAN=BYTE_ORDER -DTEMPLATE_DEFS_INCLUDED -DHAVE_OCC
| | -DHAVE_OCC_IGES -DHAVE_OCC_STEP -DHAVE_OCC_STL -DSRCDIR=. -I../util
| | -I../geom -I../init -I../geom/parallel -DUSE_MPI -Wall -pipe
| | -pedantic
| | -O2 -DNDEBUG -MT test_edge_orient.o -MD -MP -MF
| | .deps/test_edge_orient.Tpo -c -o test_edge_orient.o
| | test_edge_orient.cc

| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx
| | -DHAVE_CONFIG_H -I. -I.. -I../geom/parallel -I../geom
| | -DLITTLE_ENDIAN=BYTE_ORDER -DTEMPLATE_DEFS_INCLUDED -DHAVE_OCC
| | -DHAVE_OCC_IGES -DHAVE_OCC_STEP -DHAVE_OCC_STL -DSRCDIR=. -I../util
| | -I../geom -I../init -I../geom/parallel -DUSE_MPI -DFORCE_OCC -Wall
| | -pipe -pedantic -O2 -DNDEBUG -MT testgeom_occ-testgeom.o -MD -MP -MF
| | .deps/testgeom_occ-testgeom.Tpo -c -o testgeom_occ-testgeom.o `test
| | -f
| | 'testgeom.cc' || echo './'`testgeom.cc

| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx
| | -DHAVE_CONFIG_H -I. -I.. -I../geom/parallel -I../geom
| | -DLITTLE_ENDIAN=BYTE_ORDER -DTEMPLATE_DEFS_INCLUDED -DHAVE_OCC
| | -DHAVE_OCC_IGES -DHAVE_OCC_STEP -DHAVE_OCC_STL -DSRCDIR=. -I../util
| | -I../geom -I../init -I../geom/parallel -DUSE_MPI -Wall -pipe
| | -pedantic
| | -O2 -DNDEBUG -MT copy_attrib.o -MD -MP -MF .deps/copy_attrib.Tpo -c
| | -o
| | copy_attrib.o copy_attrib.cpp

| | mv -f .deps/chaman.Tpo .deps/chaman.Po

| | /bin/sh ../libtool --tag=CXX --mode=link
| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall
| | -pipe
| | -pedantic -O2 -DNDEBUG
| | -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib -o partest
| | partest-partest.o libiGeom.la -lTKernel -lm

| | mv -f .deps/copy_attrib.Tpo .deps/copy_attrib.Po

| | /bin/sh ../libtool --tag=CXX --mode=link
| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall
| | -pipe
| | -pedantic -O2 -DNDEBUG
| | -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib -o chaman
| | chaman.o libiGeom.la -lTKernel -lm

| | mv -f .deps/test_edge_orient.Tpo .deps/test_edge_orient.Po

| | /bin/sh ../libtool --tag=CXX --mode=link
| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall
| | -pipe
| | -pedantic -O2 -DNDEBUG
| | -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib -o
| | copy_attrib copy_attrib.o libiGeom.la -lTKernel -lm

| | libtool: link:
| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall
| | -pipe
| | -pedantic -O2 -DNDEBUG -o .libs/partest partest-partest.o
| | -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib
| | ./.libs/libiGeom.so
| | /homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib/libTKernel.so
| | -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib -Wl,-rpath
| | -Wl,/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib

| | libtool: link:
| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall
| | -pipe
| | -pedantic -O2 -DNDEBUG -o .libs/chaman chaman.o
| | -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib
| | ./.libs/libiGeom.so
| | /homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib/libTKernel.so
| | -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib -Wl,-rpath
| | -Wl,/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib

| | libtool: link:
| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall
| | -pipe
| | -pedantic -O2 -DNDEBUG -o .libs/copy_attrib copy_attrib.o
| | -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib
| | ./.libs/libiGeom.so
| | /homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib/libTKernel.so
| | -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib -Wl,-rpath
| | -Wl,/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib

| | mv -f .deps/testgeom_occ-testgeom.Tpo .deps/testgeom_occ-testgeom.Po

| | /bin/sh ../libtool --tag=CXX --mode=link
| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall
| | -pipe
| | -pedantic -O2 -DNDEBUG
| | -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib -o
| | test_edge_orient test_edge_orient.o libiGeom.la -lTKernel -lm

| | /homes/fathom/install/occpar/cgm/lib/libcgm.so.0: undefined
| | reference
| | to `Standard_PI'

| | collect2: ld returned 1 exit status

| | ...make[5]: *** Waiting for unfinished jobs....

| | /homes/fathom/install/occpar/cgm/lib/libcgm.so.0: undefined
| | reference
| | to `Standard_PI'

| | collect2: ld returned 1 exit status

| | .../homes/fathom/install/occpar/cgm/lib/libcgm.so.0: undefined
| | reference to `Standard_PI'

| | collect2: ld returned 1 exit status

| | ...libtool: link:
| | /homes/fathom/3rdparty/mpich2/mpich2-1.2.1/gcc/bin/mpicxx -Wall
| | -pipe
| | -pedantic -O2 -DNDEBUG -o .libs/test_edge_orient test_edge_orient.o
| | -L/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib
| | ./.libs/libiGeom.so
| | /homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib/libTKernel.so
| | -lm -Wl,-rpath -Wl,/homes/fathom/install/occpar/cgm/lib -Wl,-rpath
| | -Wl,/homes/fathom/3rdparty/occ/OpenCASCADE6.5.3/gccGnep/lib

| | /homes/fathom/install/occpar/cgm/lib/libcgm.so.0: undefined
| | reference
| | to `Standard_PI'

| | collect2: ld returned 1 exit status

| --

| Jane Hu

| Asst. Researcher

| Dept. of Engineering Physics

| UW @ Madison

| "And we know that for those who love God, that is, for those who are
| called according to his purpose, all things are working together for
| good." (Romans 8:28)

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