[petsc-users] with hdf5 dir

paul zhang paulhuaizhang at gmail.com
Wed Dec 17 09:30:33 CST 2014


​​
Attached.

Thanks,
Paul

Huaibao (Paul) Zhang
*Gas Surface Interactions Lab*
Department of Mechanical Engineering
University of Kentucky,
Lexington,
KY, 40506-0503
*Office*: 216 Ralph G. Anderson Building
*Web*:gsil.engineering.uky.edu

On Wed, Dec 17, 2014 at 10:19 AM, Matthew Knepley <knepley at gmail.com> wrote:
>
> On Wed, Dec 17, 2014 at 8:58 AM, paul zhang <paulhuaizhang at gmail.com>
> wrote:
>>
>> Hi All,
>>
>> I attempted to include hdf5 dir in my configuration, but failed.
>>
>> --with-hdf5-dir=$HDF5PATH
>>
>> I tried HDF5PATH=/share/cluster/SLES9/x86_64/apps/hdf5/1.8.3, but it
>> shows
>>
>
> When you get a failure like this, you have to send configure.log
>
>   Thanks,
>
>      Matt
>
>
>>          UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for
>> details):
>>
>> -------------------------------------------------------------------------------
>> --with-hdf5-dir=/share/cluster/SLES9/x86_64/apps/hdf5/1.8.3 did not work
>>
>> *******************************************************************************
>>
>>
>> As I run $module show hdf5, I got
>>
>> *-------------------------------------------------------------------*
>> */usr/share/Modules/modulefiles/hdf5/1.8.3/icc/default:*
>>
>> *module-whatis load HDF5 environment *
>> *prepend-path PATH /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/bin *
>> *append-path LD_LIBRARY_PATH
>> /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/lib *
>> *prepend-path MANPATH
>> /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/share/man *
>> *setenv HDF_INCL /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/include *
>> *-------------------------------------------------------------------*
>>
>> What is my HDF5PATH?
>>
>>
>> Thanks,
>> Paul
>>
>>
>> Huaibao (Paul) Zhang
>> *Gas Surface Interactions Lab*
>> Department of Mechanical Engineering
>> University of Kentucky,
>> Lexington,
>> KY, 40506-0503
>> *Office*: 216 Ralph G. Anderson Building
>> *Web*:gsil.engineering.uky.edu
>>
>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which their
> experiments lead.
> -- Norbert Wiener
>
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