[petsc-users] with hdf5 dir

Matthew Knepley knepley at gmail.com
Wed Dec 17 09:19:24 CST 2014


On Wed, Dec 17, 2014 at 8:58 AM, paul zhang <paulhuaizhang at gmail.com> wrote:
>
> Hi All,
>
> I attempted to include hdf5 dir in my configuration, but failed.
>
> --with-hdf5-dir=$HDF5PATH
>
> I tried HDF5PATH=/share/cluster/SLES9/x86_64/apps/hdf5/1.8.3, but it shows
>

When you get a failure like this, you have to send configure.log

  Thanks,

     Matt


>          UNABLE to CONFIGURE with GIVEN OPTIONS    (see configure.log for
> details):
>
> -------------------------------------------------------------------------------
> --with-hdf5-dir=/share/cluster/SLES9/x86_64/apps/hdf5/1.8.3 did not work
>
> *******************************************************************************
>
>
> As I run $module show hdf5, I got
>
> *-------------------------------------------------------------------*
> */usr/share/Modules/modulefiles/hdf5/1.8.3/icc/default:*
>
> *module-whatis load HDF5 environment *
> *prepend-path PATH /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/bin *
> *append-path LD_LIBRARY_PATH
> /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/lib *
> *prepend-path MANPATH
> /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/share/man *
> *setenv HDF_INCL /share/cluster/SLES9/x86_64/apps/hdf5/1.8.3/icc/include *
> *-------------------------------------------------------------------*
>
> What is my HDF5PATH?
>
>
> Thanks,
> Paul
>
>
> Huaibao (Paul) Zhang
> *Gas Surface Interactions Lab*
> Department of Mechanical Engineering
> University of Kentucky,
> Lexington,
> KY, 40506-0503
> *Office*: 216 Ralph G. Anderson Building
> *Web*:gsil.engineering.uky.edu
>


-- 
What most experimenters take for granted before they begin their
experiments is infinitely more interesting than any results to which their
experiments lead.
-- Norbert Wiener
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