[petsc-users] Some questions in PETSc installation.

paul zhang paulhuaizhang at gmail.com
Thu Nov 15 12:18:14 CST 2012


Hi Matt,

Do you have some idea to install   f2cblas and  f2clapack to /usr/lib on my
local Ubuntu? Since PETSc needs them.

Thanks,
Paul


On Thu, Nov 15, 2012 at 12:30 PM, huaibao zhang <paulhuaizhang at gmail.com>wrote:

> Thanks a lot for your help Matt.
> Paul
>
> --
> Huaibao (Paul) Zhang
> *Gas Surface Interactions Lab*
> Department of Mechanical Engineering
> University of Kentucky,
> Lexington, KY, 40506-0503
> *Office*: 216 Ralph G. Anderson Building
> *Web*:gsil.engineering.uky.edu
>
> On Nov 15, 2012, at 12:29 PM, Matthew Knepley <knepley at gmail.com> wrote:
>
> On Thu, Nov 15, 2012 at 12:23 PM, paul zhang <paulhuaizhang at gmail.com>
> wrote:
>
> Hi there,
> Can I get some help to solve this issue?
>
>
> [hzh225 at dlxlogin2-2 petsc-3.1-p4]$ make
> PETSC_DIR=/home/hzh225/LIB_CFD/PETSC
> test
> Running test examples to verify correct installation
> Possible error running C/C++ src/snes/examples/tutorials/ex19 with 1 MPI
> process
> See
> http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html
> --------------------------------------------------------------------------
>
>
> This is not our message. It comes from your MPI.
>
>  Matt
>
> WARNING: It appears that your OpenFabrics subsystem is configured to only
> allow registering part of your physical memory.  This can cause MPI jobs to
> run with erratic performance, hang, and/or crash.
>
> This may be caused by your OpenFabrics vendor limiting the amount of
> physical memory that can be registered.  You should investigate the
> relevant Linux kernel module parameters that control how much physical
> memory can be registered, and increase them to allow registering all
> physical memory on your machine.
>
>
>
> --
> Huaibao (Paul) Zhang
> Gas Surface Interactions Lab
> Department of Mechanical Engineering
> University of Kentucky,
> Lexington,
> KY, 40506-0503
> Office: 216 Ralph G. Anderson Building
> Web:gsil.engineering.uky.edu
>
>
>
>
> --
> What most experimenters take for granted before they begin their
> experiments is infinitely more interesting than any results to which
> their experiments lead.
> -- Norbert Wiener
>
>
>


-- 
Huaibao (Paul) Zhang
*Gas Surface Interactions Lab*
Department of Mechanical Engineering
University of Kentucky,
Lexington,
KY, 40506-0503*
Office*: 216 Ralph G. Anderson Building
*Web*:gsil.engineering.uky.edu
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