0.9.0 installation

Rob Ross rross at mcs.anl.gov
Mon Sep 8 11:45:30 CDT 2003


Hi John,

Could you send all the environment variables and such that you set?

It looks like maybe MPICC wasn't set?  That ld output is vague, but I 
think it's saying that i couldn't find those symbols.

Otherwise this is similar to the issues that Reiner was seeing (i.e. we 
need LIBS on the MPI compile lines).

We're trying to collect all these little issues so we can make another 
release that addresses all the configure/build quirks that people are 
seeing.

It's nice that we're down to this though!  Next thing you know everything
will build fine, and we will only be worried about performance :)!

Regards,

Rob

On Mon, 8 Sep 2003, John Tannahill wrote:

> I have had pretty good success running a bunch of timings (different file
> sizes, different numbers of processors) of 0.9.0 on NERSC's IBM SP.  I am
> now trying to install 0.9.0 on a Compaq Teracluster 2000 that we have.  It
> looks like I have installed older versions (not sure exactly what I had to
> do?), but when I try to run the "make" on this version, I get the output
> below.  Can anyone help me out?
> 
> Note that the ./configure --prefix=... seemed to work fine (did not run
> autoconf); also did not use the --with-mpi=... argument.
> 
> Thanks,
> John
> 
> /g/g17/jrt/pnetcdf/parallel-netcdf-0.9.0[29]: make
> 
> Making `all' in directory /g/g17/jrt/pnetcdf/parallel-netcdf-0.9.0/src
> 
> cd lib && make
> gcc -c -O -I.   -DNDEBUG mpinetcdf.c
> gcc -c -O -I.   -DNDEBUG header.c
> gcc -c -O -I.   -DNDEBUG mpincio.c
> gcc -c -O -I.   -DNDEBUG attr.c
> gcc -c -O -I.   -DNDEBUG dim.c
> gcc -c -O -I.   -DNDEBUG error.c
> gcc -c -O -I.   -DNDEBUG nc.c
> gcc -c -O -I.   -DNDEBUG ncx.c
> gcc -c -O -I.   -DNDEBUG string.c
> gcc -c -O -I.   -DNDEBUG var.c
> ar cru libpnetcdf.a mpinetcdf.o  header.o  mpincio.o  attr.o  dim.o  error.o  nc
> .o  ncx.o  string.o  var.o
> ranlib libpnetcdf.a
> m4 -B10000 -DAPI=C ./../../man/netcdf.m4 >pnetcdf.3  || rm pnetcdf.3
> gcc -c -O -I.   -DNDEBUG validator.c
> gcc -o ncvalid -O  validator.o  header.o  mpincio.o  attr.o  dim.o  nc.o  ncx.o
>   string.o  var.o
> MPI_Comm_rank
> MPI_File_set_view
> MPI_Error_string
> MPI_File_read_at
> MPI_Finalize
> MPI_Bcast
> MPI_File_delete
> MPI_File_open
> MPI_File_sync
> MPI_Barrier
> MPI_File_close
> MPI_Comm_size
> MPI_Allreduce
> MPI_File_write_at
> collect2: ld returned 1 exit status
> *** Exit 1
> Stop.
> *** Exit 1
> Stop.
> *** Exit 1
> Stop.
> *** Exit 1
> Stop.
> 
> -- 
>        +----------------------------------------------------------------------+
>        |                                          John R. Tannahill           |
>        |    _/      _/      _/    _/  _/          Lawrence Livermore Nat. Lab |
>        |   _/      _/      _/_/  _/  _/           P.O. Box 808, M/S L-103     |
>        |  _/      _/      _/  _/_/  _/            Livermore, CA  94551        |
>        | _/_/_/  _/_/_/  _/    _/  _/_/_/         Phone:  925-423-3514        |
>        |                                          Fax:    925-423-4908        |
>        | Lawrence Livermore National Laboratory   Email:  jrt at llnl.gov        |
>        +----------------------------------------------------------------------+
> 
> 
> 





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