0.9.0 installation

[John Tannahill]

Rob,

Thanks for the quick response.  I did not change anything, just did
./configure --prefix=/whatever & then ran make. I have included the
output from my executing "printenv" below.

John

/g/g17/jrt/pnetcdf/parallel-netcdf-0.9.0[30]: printenv
USER=jrt
LOGNAME=jrt
HOME=/g/g17/jrt
PATH=/usr/local/bin:/usr/bin:/usr/ccs/bin:/usr/bin/X11:/usr/apps/bin:/usr/gapps/
bin:.:/usr/bin/X11:/g/g17/jrt/gem/bin:/g/g17/jrt/gem/esm_tools/bin:/g/g17/jrt/ge
m/actm/impact/Other/scripts:/g/g17/jrt/bin:.
MAIL=/var/spool/mail/jrt
SHELL=/bin/csh
SSH_CLIENT=128.115.57.123 38445 922
SSH_CONNECTION=128.115.57.123 38445 134.9.1.183 922
SSH_TTY=/dev/pts/8
TERM=xterm
DISPLAY=localhost:17.0
SHLVL=1
MANPATH=/usr/local/man:/usr/man:/usr/apps/man
HOST_GRP=compaq
SYS_TYPE=tru64_5sc
ENVIRONMENT=INTERACTIVE
TMPDIR=/var/tmp/jrt
TMP=/var/tmp/jrt
LM_LICENSE_FILE=/usr/local/etc/license.client
ARCHITECTURE=ARCH_COMPAQ
HOSTMACH=tckk_machine
GEMHOME=/g/g17/jrt/gem
IMP_DATA=/g/g17/jrt/imp_data
LPDEST=hpchem
PRINTER=hpchem
WRK=/g/g17/jrt
GLOGIN=1
EDITOR=/usr/bin/vi
EXINIT=set nowrapscan ignorecase report=1 showmode


Rob Ross wrote:
> Hi John,
> 
> Could you send all the environment variables and such that you set?
> 
> It looks like maybe MPICC wasn't set?  That ld output is vague, but I 
> think it's saying that i couldn't find those symbols.
> 
> Otherwise this is similar to the issues that Reiner was seeing (i.e. we 
> need LIBS on the MPI compile lines).
> 
> We're trying to collect all these little issues so we can make another 
> release that addresses all the configure/build quirks that people are 
> seeing.
> 
> It's nice that we're down to this though!  Next thing you know everything
> will build fine, and we will only be worried about performance :)!
> 
> Regards,
> 
> Rob
> 
> On Mon, 8 Sep 2003, John Tannahill wrote:
> 
> 
>>I have had pretty good success running a bunch of timings (different file
>>sizes, different numbers of processors) of 0.9.0 on NERSC's IBM SP.  I am
>>now trying to install 0.9.0 on a Compaq Teracluster 2000 that we have.  It
>>looks like I have installed older versions (not sure exactly what I had to
>>do?), but when I try to run the "make" on this version, I get the output
>>below.  Can anyone help me out?
>>
>>Note that the ./configure --prefix=... seemed to work fine (did not run
>>autoconf); also did not use the --with-mpi=... argument.
>>
>>Thanks,
>>John
>>
>>/g/g17/jrt/pnetcdf/parallel-netcdf-0.9.0[29]: make
>>
>>Making `all' in directory /g/g17/jrt/pnetcdf/parallel-netcdf-0.9.0/src
>>
>>cd lib && make
>>gcc -c -O -I.   -DNDEBUG mpinetcdf.c
>>gcc -c -O -I.   -DNDEBUG header.c
>>gcc -c -O -I.   -DNDEBUG mpincio.c
>>gcc -c -O -I.   -DNDEBUG attr.c
>>gcc -c -O -I.   -DNDEBUG dim.c
>>gcc -c -O -I.   -DNDEBUG error.c
>>gcc -c -O -I.   -DNDEBUG nc.c
>>gcc -c -O -I.   -DNDEBUG ncx.c
>>gcc -c -O -I.   -DNDEBUG string.c
>>gcc -c -O -I.   -DNDEBUG var.c
>>ar cru libpnetcdf.a mpinetcdf.o  header.o  mpincio.o  attr.o  dim.o  error.o  nc
>>.o  ncx.o  string.o  var.o
>>ranlib libpnetcdf.a
>>m4 -B10000 -DAPI=C ./../../man/netcdf.m4 >pnetcdf.3  || rm pnetcdf.3
>>gcc -c -O -I.   -DNDEBUG validator.c
>>gcc -o ncvalid -O  validator.o  header.o  mpincio.o  attr.o  dim.o  nc.o  ncx.o
>>  string.o  var.o
>>MPI_Comm_rank
>>MPI_File_set_view
>>MPI_Error_string
>>MPI_File_read_at
>>MPI_Finalize
>>MPI_Bcast
>>MPI_File_delete
>>MPI_File_open
>>MPI_File_sync
>>MPI_Barrier
>>MPI_File_close
>>MPI_Comm_size
>>MPI_Allreduce
>>MPI_File_write_at
>>collect2: ld returned 1 exit status
>>*** Exit 1
>>Stop.
>>*** Exit 1
>>Stop.
>>*** Exit 1
>>Stop.
>>*** Exit 1
>>Stop.
>>
>>-- 
>>       +----------------------------------------------------------------------+
>>       |                                          John R. Tannahill           |
>>       |    _/      _/      _/    _/  _/          Lawrence Livermore Nat. Lab |
>>       |   _/      _/      _/_/  _/  _/           P.O. Box 808, M/S L-103     |
>>       |  _/      _/      _/  _/_/  _/            Livermore, CA  94551        |
>>       | _/_/_/  _/_/_/  _/    _/  _/_/_/         Phone:  925-423-3514        |
>>       |                                          Fax:    925-423-4908        |
>>       | Lawrence Livermore National Laboratory   Email:  jrt at llnl.gov        |
>>       +----------------------------------------------------------------------+
>>
>>
>>
> 
> 
> 
> 


-- 
       +----------------------------------------------------------------------+
       |                                          John R. Tannahill           |
       |    _/      _/      _/    _/  _/          Lawrence Livermore Nat. Lab |
       |   _/      _/      _/_/  _/  _/           P.O. Box 808, M/S L-103     |
       |  _/      _/      _/  _/_/  _/            Livermore, CA  94551        |
       | _/_/_/  _/_/_/  _/    _/  _/_/_/         Phone:  925-423-3514        |
       |                                          Fax:    925-423-4908        |
       | Lawrence Livermore National Laboratory   Email:  jrt at llnl.gov        |
       +----------------------------------------------------------------------+