[Nek5000-users] Error when running the vortex problem

[nek5000-users at lists.mcs.anl.gov]

Hi Dong,

For some reason, your run is traversing the .f00000 file format
branch, rather than the .fld input branch.

This traversal is generally controlled by setting 
param(66)=4 (for .fld) in usrdat2 (or usrdat) in the .usr file.

I'm wondering if you are compiling with r1854.usr provided in
the examples/vortex directory?

Paul

On Tue, 11 Oct 2011, nek5000-users at lists.mcs.anl.gov wrote:

>
> Hi Dong,
>
> What kind of platform are you running on?
>
> Can you do an svn update in the example directory, just in case
> the file was contaminated on transfer?
>
> Paul
>
> On Tue, 11 Oct 2011, nek5000-users at lists.mcs.anl.gov wrote:
>
>> Hi, Stefan.
>> Sure. Attached is the log file.
>> 
>> -Dong
>> 
>> -----Original Message-----
>> From: nek5000-users-bounces at lists.mcs.anl.gov 
>> [mailto:nek5000-users-bounces at lists.mcs.anl.gov] On Behalf Of 
>> nek5000-users at lists.mcs.anl.gov
>> Sent: Tuesday, October 11, 2011 2:15 PM
>> To: nek5000-users at lists.mcs.anl.gov
>> Subject: Re: [Nek5000-users] Error when running the vortex problem
>> 
>> Please post a full log file. Note the file size is limited to 100KB.
>> -Stefan
>> 
>> On 10/11/11, S K <stgeke at googlemail.com> wrote:
>>> Hi Dong,
>>> 
>>> It works for me. Did you change anything?
>>> 
>>> -Stefan
>>> 
>>> On 10/11/11, nek5000-users at lists.mcs.anl.gov
>>> <nek5000-users at lists.mcs.anl.gov> wrote:
>>>> Hi,
>>>> I was trying to run nek5000 with vortex, following the default user
>>>> setting.
>>>> There is no problem for building, however when I start to run the
>>>> application, there is an error "NONSTD HDR, parse_hdr, abort". The
>>>> following
>>>> is the related error report.
>>>> 
>>>> Reading checkpoint data
>>>>        0       0 OPEN: r1492_n08.fld27
>>>> byte swap: T   0.000000       0.000000
>>>> 140   8   8   8 5.0101000E+0250101 U P                             4
>>>> NELT,NX,N
>>>> úaÃ@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@
>>>>
>>>>                           NONSTD HDR, parse_hdr, abort.
>>>> 
>>>> I briefly read the code. It looks like the code is reading the checkpoint
>>>> file "r1492_n08.fld27" and there is something wrong with the file header.
>>>> The file header does not follow the standard format and the code cannot
>>>> understand the file.
>>>> 
>>>> How can I solve this problem?
>>>> 
>>>> Thank you.
>>>> 
>>>> -Dong
>>>> 
>>> 
>> _______________________________________________
>> Nek5000-users mailing list
>> Nek5000-users at lists.mcs.anl.gov
>> https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users
>


On Tue, 11 Oct 2011, nek5000-users at lists.mcs.anl.gov wrote:

> Hi, Stefan.
> Sure. Attached is the log file.
>
> -Dong
>
> -----Original Message-----
> From: nek5000-users-bounces at lists.mcs.anl.gov [mailto:nek5000-users-bounces at lists.mcs.anl.gov] On Behalf Of nek5000-users at lists.mcs.anl.gov
> Sent: Tuesday, October 11, 2011 2:15 PM
> To: nek5000-users at lists.mcs.anl.gov
> Subject: Re: [Nek5000-users] Error when running the vortex problem
>
> Please post a full log file. Note the file size is limited to 100KB.
> -Stefan
>
> On 10/11/11, S K <stgeke at googlemail.com> wrote:
>> Hi Dong,
>>
>> It works for me. Did you change anything?
>>
>> -Stefan
>>
>> On 10/11/11, nek5000-users at lists.mcs.anl.gov
>> <nek5000-users at lists.mcs.anl.gov> wrote:
>>> Hi,
>>> I was trying to run nek5000 with vortex, following the default user
>>> setting.
>>> There is no problem for building, however when I start to run the
>>> application, there is an error "NONSTD HDR, parse_hdr, abort". The
>>> following
>>> is the related error report.
>>>
>>> Reading checkpoint data
>>>        0       0 OPEN: r1492_n08.fld27
>>> byte swap: T   0.000000       0.000000
>>> 140   8   8   8 5.0101000E+0250101 U P                             4
>>> NELT,NX,N
>>> úaÃ@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@
>>>
>>>                           NONSTD HDR, parse_hdr, abort.
>>>
>>> I briefly read the code. It looks like the code is reading the checkpoint
>>> file "r1492_n08.fld27" and there is something wrong with the file header.
>>> The file header does not follow the standard format and the code cannot
>>> understand the file.
>>>
>>> How can I solve this problem?
>>>
>>> Thank you.
>>>
>>> -Dong
>>>
>>
> _______________________________________________
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> Nek5000-users at lists.mcs.anl.gov
> https://lists.mcs.anl.gov/mailman/listinfo/nek5000-users
>