[Swift-user] hung submission

[Mihael Hategan]

It seems that it is more likely that the error message gets truncated
rather than the path itself. After all, stdout_path_list does contain
what seems to be the correct path.

There should be a
script: /imports/home1/tcrnma3/Scratch/UrbanModel/run005/scripts/SGE7948718974736431209.submit
(or similar) that should be available while a swift run is in progress. 

I think one way to troubleshoot things would be to copy that script and
submit it manually.

Mihael

On Sun, 2015-05-03 at 19:20 +0000, Altaweel, Mark wrote:
> Yes so I do import swift in the shell script that gets distributed. However, same conclusion it seems. I don’t understand why it truncates the path, unless it is there but only writes a certain number of the characters.
> 
> This is added to the script:
> 
> export PATH=$PATH:~/Scratch/swift-0.96-sge-mod/bin
> module load java/1.7.0_45
> 
> So java is included. If I remove it same thing happens though.
> 
> Mark
> 
> 
> 
> On May 3, 2015, at 8:07 PM, Mihael Hategan <hategan at mcs.anl.gov<mailto:hategan at mcs.anl.gov>> wrote:
> 
> On Sun, 2015-05-03 at 18:43 +0000, Altaweel, Mark wrote:
> error reason    1:          05/03/2015 19:38:15 [147447:22761]: error: can't open output file "/imports/home1/tcrnma3/Scratch/Ur
> 
> ... aaand my PE suggestion had little to do with the problem.
> 
> Is /imports mounted on compute nodes?
> 
> Mihael
> 
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