[Swift-user] Question about output files

Lorenzo Pesce lpesce at uchicago.edu
Sat Mar 24 09:35:07 CDT 2012


Thanks a lot. Let me test this and get back to you ASAP.

On Mar 24, 2012, at 1:12 AM, David Kelly wrote:

> Lorenzo,
> 
> The result files will have to be defined in your swift script to get them back from the work directory. There are a few different ways to go about this.
> 
> Here is one simple example. For this example, I'm going to assume that each app call creates one result file, and that the value of "s" determines the filename.
> 
> app (file outdata, file result) demoreal (string mcr, int chn, int ht, string datafile)
> {
>   runDemoReal mcr chn ht datafile stdout=@outdata;
> }
> .
> .
> .
> foreach s, i in ht {
>  int chn=1;
>  file result <single_file_mapper; file=@strcat("result_neuron_", s, "_ht_00.mat)>;
>  (LogDemoReal[s], result) = demoreal (MCRPath, chn, s, spikefile);
> }
> 
> David
> 
> ----- Original Message -----
>> From: "Lorenzo Pesce" <lpesce at uchicago.edu>
>> To: swift-user at ci.uchicago.edu
>> Sent: Friday, March 23, 2012 7:30:12 PM
>> Subject: [Swift-user] Question about output files
>> Hi --
>> 
>> I am writing a script to run a parameter sweep on Beagle (Cray XE6).
>> 
>> I am interested in the output files they write, but somehow I seem to
>> be unable to locate them. The calculations seem to proceed fine
>> according to the log files (stdout), but I can't find the mat files
>> that should contain the actual results.
>> The should be files like this one result_neuron_##_ht_##.mat
>> 
>> This is the script. Thanks a lot!
>> 
>> // file to run the Margic square example from the matlab web site
>> type file;
>> 
>> string MCRPath = "/soft/matlab/7.13";
>> string spikefile = "X.mat";
>> 
>> app (file outdata) demoreal (string mcr, int chn, int ht, string
>> datafile)
>> {
>> runDemoReal mcr chn ht datafile stdout=@outdata;
>> }
>> 
>> int ht[] = [3, 6, 9, 12, 15, 18, 21, 24];
>> 
>> file LogDemoReal[] <simple_mapper; prefix="demo_real",suffix=".log">;
>> 
>> foreach s, i in ht {
>> int chn=1;
>> LogDemoReal[s] = demoreal (MCRPath, chn, s, spikefile);
>> }
>> 
>> 
>> 
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