[Swift-user] gram on ranger

Sarah Kenny skenny at uchicago.edu
Mon Oct 10 17:43:04 CDT 2011


ok, thanks, got in the queue now...also, realized my last run may have been
using the old swift. apparently i had SWIFT_HOME set in my env and that
overrides the newer swift i had set in my PATH.

~sk

On Mon, Oct 10, 2011 at 12:28 PM, David Kelly <davidk at ci.uchicago.edu>wrote:

> Sarah,
>
> Can you give this another try with the latest 0.93? I made some changes to
> the coaster and sge providers and was able to get it working with a simple
> catns script. Here is the configuration file I was using:
>
> <config>
> <pool handle="ranger">
>      <execution provider="coaster" jobManager="gt2:SGE" url="
> gatekeeper.ranger.tacc.teragrid.org"/>
>       <filesystem provider="gsiftp" url="gsiftp://
> gridftp.ranger.tacc.teragrid.org"/>
>       <profile namespace="globus" key="maxtime">3600</profile>
>      <profile namespace="globus" key="maxWallTime">00:00:03</profile>
>      <profile namespace="globus" key="jobsPerNode">1</profile>
>      <profile namespace="globus" key="nodeGranularity">16</profile>
>      <profile namespace="globus" key="maxNodes">16</profile>
>      <profile namespace="globus" key="queue">development</profile>
>      <profile namespace="karajan" key="jobThrottle">0.9</profile>
>       <profile namespace="globus" key="project">TG-DBS080004N</profile>
>       <profile namespace="globus" key="pe">16way</profile>
>       <workdirectory>/share/home/01503/davidkel/swiftwork</workdirectory>
> </pool>
> </config>
>
> Thanks,
> David
>
> ----- Original Message -----
> > From: "Sarah Kenny" <skenny at uchicago.edu>
> > To: "Justin M Wozniak" <wozniak at mcs.anl.gov>
> > Cc: "Swift Devel" <swift-devel at ci.uchicago.edu>, "Swift User" <
> swift-user at ci.uchicago.edu>
> > Sent: Friday, October 7, 2011 3:13:57 PM
> > Subject: Re: [Swift-user] gram on ranger
> > /home/skenny/swift_logs/dummy-20111005-0126-6575n7x5.log
> >
> > on ci
> >
> >
> > On Fri, Oct 7, 2011 at 8:16 AM, Justin M Wozniak < wozniak at mcs.anl.gov
> > > wrote:
> >
> >
> >
> > Can I take a look at the log?
> >
> >
> >
> >
> > On Thu, 6 Oct 2011, Sarah Kenny wrote:
> >
> >
> >
> > hey all, i'm trying to submit to gram on ranger using the latest swift
> > (built from trunk). it failes like so:
> >
> > Cannot submit job
> > Caused by:
> > org.globus.cog.abstraction. impl.common.task. TaskSubmissionException:
> > Cannot
> > submit job
> > Caused by: org.globus.gram.GramException: Parameter not supported
> > Cannot submit job
> >
> > the gram log was saying first that 'jobsPerNode' is not supported so i
> > changed it to workersPerNode and then it was saying 'maxnodes' is not
> > supported. here's my sites file:
> >
> > <config>
> > <pool handle="RANGER">
> > <profile namespace="karajan" key="initialScore">10000</ profile>
> > <profile namespace="karajan" key="jobThrottle">1</profile>
> > <profile namespace="globus" key="maxWallTime">00:15:00</ profile>
> > <profile namespace="globus" key="maxTime">86400</profile>
> > <profile namespace="globus" key="slots">1</profile>
> > <profile namespace="globus" key="maxNodes">256</profile>
> > <profile namespace="globus" key="pe">16way</profile>
> > <profile namespace="globus" key="workersPerNode">1</ profile>
> > <profile namespace="globus" key="nodeGranularity">64</ profile>
> > <profile namespace="globus" key="queue">normal</profile>
> > <profile namespace="globus" key="project">TG-DBS080004N</ profile>
> > <filesystem provider="gsiftp" url="gsiftp://
> > gridftp.ranger.tacc.teragrid. org "/>
> > <execution provider="coaster" jobManager="gt2:gt2:SGE" url="
> > gatekeeper.ranger.tacc. teragrid.org "/>
> > <execution provider="gt2" jobManager="SGE" url="
> > gatekeeper.ranger.tacc. teragrid.org "/>
> > <workdirectory>/work/00043/ tg457040</workdirectory>
> > </pool>
> > </config>
> >
> > thoughts? ideas?
> >
> > --
> > Justin M Wozniak
> >
> >
> >
> > --
> > Sarah Kenny
> > Programmer ~ Brain Circuits Laboratory ~ Rm 2224 Bio Sci III
> > University of California Irvine, Dept. of Neurology ~ 773-818-8300
> >
> >
> > _______________________________________________
> > Swift-user mailing list
> > Swift-user at ci.uchicago.edu
> > https://lists.ci.uchicago.edu/cgi-bin/mailman/listinfo/swift-user
>



-- 
Sarah Kenny
Programmer ~ Brain Circuits Laboratory ~ Rm 2224 Bio Sci III
University of California Irvine, Dept. of Neurology ~ 773-818-8300
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