[Swift-user] Adding :bigmem to node count

Justin M Wozniak wozniak at mcs.anl.gov
Mon Mar 21 11:29:43 CDT 2011


Hello
 	Ok, I do not think that the queue is actually there (I found that 
in an old web page.)  There is a new feature in trunk to support this.  I 
tested the sites.xml file pasted below and it did give me a fat node on 
Fusion (as reported by /usr/bin/free).
 	Justin

<config>
<pool handle="local-pbs">
   <execution provider="pbs" url="none" />
   <filesystem provider="local" url="none" />
   <profile namespace="globus"  key="maxwalltime">5</profile>
   <profile namespace="globus"  key="pbs.properties">bigmem</profile>
   <workdirectory>/home/wozniak/work</workdirectory>
</pool>
</config>

On Fri, 18 Mar 2011, Justin M Wozniak wrote:

> Hello
> 	Actually, it looks like there may be a queue for bigmem jobs, is that 
> what you want to use?  If so, you would just modify the queue profile entry 
> in sites.xml .
> 	Justin
>
> On Sun, 13 Mar 2011, Justin M Wozniak wrote:
>
>> 
>> I'll take a look at this- it will probably be a small CoG feature addition.
>> 
>> On Sat, 12 Mar 2011, Sheri Mickelson wrote:
>> 
>>> Hi Mike,
>>> 
>>> It's for fusion and I'm running with swift-r3967.
>>> 
>>> Thanks, Sheri
>>> 
>>> Michael Wilde wrote:
>>>> Sheri, I am not yet sure, but I think we'll need to add a feature in 
>>>> Swift to enable this specification to be passed down to qsub. That should 
>>>> be doable fairly soon; I had to do something similar to run on Cray XE/XT 
>>>> systems, which I did based on Swift 0.92.
>>>> 
>>>> What machine is this for, and which Swift release or build are you 
>>>> running?
>>>> 
>>>> In the meantime, a solution you could use more immediately would be to 
>>>> run with manual/persistent coasters, where you could specify your own 
>>>> qsub. This works right now but requires some wrapper scripting that is 
>>>> not yet packaged or sufficiently documented, so thats a route that also 
>>>> requires some work from you and/or us.
>>>> 
>>>> I know Justin is working with you, so we should all coordinate and 
>>>> hopefully we can resolve this soon for you.
>>>> 
>>>> - Mike
>>>> 
>>>> ----- Original Message -----
>>>>> Hi,
>>>>> 
>>>>> To run a job without swift I need to specify "-l nodes=2:bigmem" in
>>>>> either my qsub command or add it
>>>>> to my run script. How do I tell swift to add ":bigmem" to the node
>>>>> total?
>>>>> 
>>>>> Thanks, Sheri
>>>>> _______________________________________________
>>>>> Swift-user mailing list
>>>>> Swift-user at ci.uchicago.edu
>>>>> http://mail.ci.uchicago.edu/mailman/listinfo/swift-user
>>>> 
>>> _______________________________________________
>>> Swift-user mailing list
>>> Swift-user at ci.uchicago.edu
>>> http://mail.ci.uchicago.edu/mailman/listinfo/swift-user
>>> 
>> 
>> 
>
>

-- 
Justin M Wozniak



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