[Swift-user] Adding :bigmem to node count
Justin M Wozniak
wozniak at mcs.anl.gov
Mon Mar 21 11:29:43 CDT 2011
Hello
Ok, I do not think that the queue is actually there (I found that
in an old web page.) There is a new feature in trunk to support this. I
tested the sites.xml file pasted below and it did give me a fat node on
Fusion (as reported by /usr/bin/free).
Justin
<config>
<pool handle="local-pbs">
<execution provider="pbs" url="none" />
<filesystem provider="local" url="none" />
<profile namespace="globus" key="maxwalltime">5</profile>
<profile namespace="globus" key="pbs.properties">bigmem</profile>
<workdirectory>/home/wozniak/work</workdirectory>
</pool>
</config>
On Fri, 18 Mar 2011, Justin M Wozniak wrote:
> Hello
> Actually, it looks like there may be a queue for bigmem jobs, is that
> what you want to use? If so, you would just modify the queue profile entry
> in sites.xml .
> Justin
>
> On Sun, 13 Mar 2011, Justin M Wozniak wrote:
>
>>
>> I'll take a look at this- it will probably be a small CoG feature addition.
>>
>> On Sat, 12 Mar 2011, Sheri Mickelson wrote:
>>
>>> Hi Mike,
>>>
>>> It's for fusion and I'm running with swift-r3967.
>>>
>>> Thanks, Sheri
>>>
>>> Michael Wilde wrote:
>>>> Sheri, I am not yet sure, but I think we'll need to add a feature in
>>>> Swift to enable this specification to be passed down to qsub. That should
>>>> be doable fairly soon; I had to do something similar to run on Cray XE/XT
>>>> systems, which I did based on Swift 0.92.
>>>>
>>>> What machine is this for, and which Swift release or build are you
>>>> running?
>>>>
>>>> In the meantime, a solution you could use more immediately would be to
>>>> run with manual/persistent coasters, where you could specify your own
>>>> qsub. This works right now but requires some wrapper scripting that is
>>>> not yet packaged or sufficiently documented, so thats a route that also
>>>> requires some work from you and/or us.
>>>>
>>>> I know Justin is working with you, so we should all coordinate and
>>>> hopefully we can resolve this soon for you.
>>>>
>>>> - Mike
>>>>
>>>> ----- Original Message -----
>>>>> Hi,
>>>>>
>>>>> To run a job without swift I need to specify "-l nodes=2:bigmem" in
>>>>> either my qsub command or add it
>>>>> to my run script. How do I tell swift to add ":bigmem" to the node
>>>>> total?
>>>>>
>>>>> Thanks, Sheri
>>>>> _______________________________________________
>>>>> Swift-user mailing list
>>>>> Swift-user at ci.uchicago.edu
>>>>> http://mail.ci.uchicago.edu/mailman/listinfo/swift-user
>>>>
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>>> Swift-user mailing list
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>>
>>
>
>
--
Justin M Wozniak
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