[Swift-user] doesn't create output file

[Hodgess, Erin]

Hi again!

I'm looking at some of Sarah's really cool stuff and trying to reproduce test versions.

Here is the swift file:
[erin at tp-login2 bin]$ cat test1.swift
type file{}
	#--- trying to learn from Sarah's cool stuff


[erin at tp-login2 bin]$ cat test1.swift
type file{}
	#--- trying to learn from Sarah's cool stuff


	
	app (file simResult) simScript (file scriptFile, file inputFile, int iter,int tval){
	    RInvoke  @filename(scriptFile) @filename(inputFile) iter tval;
	}
	
	
	    file script<"e1.in">;
	    file inputData<"xx.dat">;
	    file simResult<"xy.out">;
	int iter = 25;
	int tval = 4;
            simResult=simScript(script,inputData,iter,tval);	

[erin at tp-login2 bin]$ 


And here is the result:
[erin at tp-login2 bin]$ swift -tc.file tc.data test1.swift
Swift svn swift-r2950 cog-r2406

RunID: 20090603-2200-krmao849
Progress:
Progress:  Checking status:1
Progress:  Checking status:1
Progress:  Checking status:1
Execution failed:
	Exception in RInvoke:
Arguments: [e1.in, xx.dat, 25, 4]
Host: localhost
Directory: test1-20090603-2200-krmao849/jobs/k/RInvoke-k4l6zqbj
stderr.txt: 
stdout.txt: 
----

Caused by:
	The following output files were not created by the application: xy.out
[erin at tp-login2 bin]$ 


The tc.data is here:
[erin at tp-login2 bin]$ cat tc.data
#NOTE WELL: fields in this file must be separated by tabs, not spaces
#           and there must be no trailing whitespace at the end of each line.
#
# sitename      app     pathname        (ignored)       (ignored)       profiles
localhost       echo    /bin/echo       INSTALLED       INTEL32::LINUX  null
teraport        echo    /bin/echo       INSTALLED       INTEL32::LINUX  null
localhost	translate	/usr/bin/tr	INSTALLED	INTEL32::LINUX	null
localhost	R	/home/erin/R-2.9.0/bin/R	INSTALLED	INTEL32::LINUX	null
localhost       wc	/usr/bin/wc     INSTALLED       INTEL32::LINUX	null
localhost       convert	/usr/bin/convert	INSTALLED	INTEL32::LINUX	null
localhost	RInvoke	/home/erin/R-2.9.0/bin/RInvoke.sh	INSTALLED	INTEL32::LINUX	null

Any suggestions most appreciated.

Erin


Erin M. Hodgess, PhD
Associate Professor
Department of Computer and Mathematical Sciences
University of Houston - Downtown
mailto: hodgesse at uhd.edu

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.mcs.anl.gov/pipermail/swift-user/attachments/20090603/3101ff49/attachment.html>